NO08G02880, NO08G02880 (gene) Nannochloropsis oceanica

Overview
NameNO08G02880
Unique NameNO08G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1978
Alignment locationchr8:809060..811037 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbx domain-containing protein 7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:809060..811037 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR036249Thioredoxin-like_sf
IPR006577UAS
IPR001012UBX_dom
IPR003903UIM_dom
Homology
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: ETI31731.1 (hypothetical protein F443_21327 [Phytophthora parasitica P1569] >ETK72108.1 hypothetical protein L915_20730 [Phytophthora parasitica] >ETL25538.1 hypothetical protein L916_20613 [Phytophthora parasitica] >ETL78752.1 hypothetical protein L917_20475 [Phytophthora parasitica] >ETM32024.1 hypothetical protein L914_20483 [Phytophthora parasitica] >ETO60443.1 hypothetical protein F444_21350 [Phytophthora parasitica P1976] >ETP01531.1 hypothetical protein F441_21225 [Phytophthora parasitica CJ01A1] >ETP29704.1 hypothetical protein F442_21166 [Phytophthora parasitica P10297])

HSP 1 Score: 120.6 bits (301), Expect = 1.700e-23
Identity = 163/580 (28.10%), Postives = 232/580 (40.00%), Query Frame = 0 
Query:    3 AQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNP---FRHFGAEARGAFGRGGNPWDVAGG-----GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575
            A D    L SF+++   G D   A +FL+ TN  +++A+ LY+ES   GG +  ++ +                                    ED N VR  D  K+QRL+                           +        FG     AFG   N  + A G        +S LFQPP  ++F G++ADAR  AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          + + Y ++                  LP + ++DPRT  +    TG   P  + +KL++    ++ D  ++ +                                K+AEP      +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     PV                                                                   L PEP  G  GVTRV+ R+P G  LTRRFL  +P+A ++ +  +++             +   R F+L T +PP         D  ++ E KL+N+SL++
Sbjct:    4 APDSQDALASFMSI--TGADSGSALQFLELTNWKLDEAVNLYMES---GGQSANTAFAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDNAVRAPDPSKRQRLVDSGMDLMRPMRHLRDQNRDFAAESIAAMTAGSISTAFGDPGAVAFGEASNNSNDADGTSTERTRDLSTLFQPPTAIMFQGTYADARTHAKNEGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCSLYQID---------------RDSLPIVVIIDPRTGEIRQRWTGFYEPQDMTEKLSDFCCMHTFDTPSTEI-------------------------------KKEAEPDIMDASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEPV-----------------------------------------------------------------VDLTPEPDAGAPGVTRVQIRVPDGSRLTRRFLKSDPLAMVWTFVKDQV------------SEARTRAFELRTSFPPS---AVAYNDTLSIEEGKLENASLMV 452
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_019191423.1 (PREDICTED: plant UBX domain-containing protein 7 isoform X1 [Ipomoea nil])

HSP 1 Score: 120.2 bits (300), Expect = 2.200e-23
Identity = 105/360 (29.17%), Postives = 159/360 (44.17%), Query Frame = 0 
Query:    1 MAAQDDGSRLRSFLAV-IGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWD---VAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVL-PPPRPPPARHSTQSEYDRSEDEQLALALAASMK 356
            ++A +  + + SFL + +G   D   A++FL AT+  +E+A++L+    DGG  AP S +  + +     P  ++IS + +G GD       E E   D + VR    V +  L   +                        V PFR+F  E +         W+    +   + ++ L++PP  L++HGSF  A+  A+ + KWLLVN+Q    F SHMLNRD WA+E V   I   FIFWQ+     E       Y L+                  +P + V+DP T + M    G + P  L + L       S  DH S+    PR  P       +  + EDE+L  ALAASM+
Sbjct:    5 LSASEQQTLVASFLEIAVGQSAD--TARQFLQATSWKLEEALQLFYVGNDGGVAAPSSYSPLENTAPLPDPSLSSISGSIKGSGD-------ESEKQGDRDEVRPPLPVIRDVLYDTAVIRGLPAMGGSAHEAR-------SVVPFRNFEQEMKHP-----GVWETDKASNSADNLASLYRPPFALMYHGSFEKAKDAARVQNKWLLVNLQSTREFSSHMLNRDTWANEAVSQTIKTNFIFWQVYDDTEEGSKVRTYYKLD-----------------SIPVVLVVDPITGQKMRSWRGMVQPETLLEDLLPFMDG-SPSDHVSLSHKRPRESPQAPPLHKDDAKEEDEELLQALAASME 325
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: OWZ05553.1 (hypothetical protein PHMEG_00022336 [Phytophthora megakarya])

HSP 1 Score: 119.8 bits (299), Expect = 2.800e-23
Identity = 107/384 (27.86%), Postives = 157/384 (40.89%), Query Frame = 0 
Query:    3 AQDDGSRLRSFLAVIGDGIDPQVAQRFLDA--------TNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAP------DAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRH-------FGAEARGAFGRG------GNPWDVAGG----------------GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSED 344
            A D    L SF+++   G D   A ++L+         T+  +++A+ LY+ESG        S+     S     P      DAA  +A A   G             E+ N VR  D  K+QRL+                           + P RH       F AE+  A   G      G P  VA G                   +S LFQPP  ++FHG+++DARA AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          + + Y ++                  LP + ++DPRT  +    TG L P  + +KL++    ++LD        P     + +  +  D SED
Sbjct:    4 APDAQEALASFMSI--TGADSGSALQYLEVSIFSFCALTSWKLDEAVNLYMESGGQSASTAFSAPRQPASSLSPPPAPRTDMDAATAAAIAAAYG-------------EEDNVVRAPDPSKRQRLVDSEMDL---------------------LRPMRHLRDQNRDFAAESIAAMTAGSISTAFGGPGAVAFGEVPSNVNGADDTGNDRTRDLSTLFQPPTAIMFHGTYSDARAHAKNESKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCSLYQID---------------RDSLPIVVIIDPRTGEIQQRWTGFLEPQDMTEKLSDFCCMHTLD-------APSAEQKKEAEPNIMDASED 329
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: ETI31732.1 (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK72109.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL25539.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL78753.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM32025.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETO60444.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP01532.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >ETP29705.1 hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 119.0 bits (297), Expect = 4.800e-23
Identity = 163/580 (28.10%), Postives = 231/580 (39.83%), Query Frame = 0 
Query:    3 AQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNP---FRHFGAEARGAFGRGGNPWDVAGG-----GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575
            A D    L SF+++   G D   A +FL+ TN  +++A+ LY+ES   GG +  ++ +                                    ED N VR  D  K+QRL+                           +        FG     AFG   N  + A G        +S LFQPP  ++F G++ADAR  AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          + + Y ++                  LP + ++DPRT  +    TG   P  + +KL++    ++ D  ++                                 +K AEP      +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     PV                                                                   L PEP  G  GVTRV+ R+P G  LTRRFL  +P+A ++ +  +++             +   R F+L T +PP         D  ++ E KL+N+SL++
Sbjct:    4 APDSQDALASFMSI--TGADSGSALQFLELTNWKLDEAVNLYMES---GGQSANTAFAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDNAVRAPDPSKRQRLVDSGMDLMRPMRHLRDQNRDFAAESIAAMTAGSISTAFGDPGAVAFGEASNNSNDADGTSTERTRDLSTLFQPPTAIMFQGTYADARTHAKNEGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCSLYQID---------------RDSLPIVVIIDPRTGEIRQRWTGFYEPQDMTEKLSDFCCMHTFDTPST--------------------------------EIKKAEPDIMDASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEPV-----------------------------------------------------------------VDLTPEPDAGAPGVTRVQIRVPDGSRLTRRFLKSDPLAMVWTFVKDQV------------SEARTRAFELRTSFPPS---AVAYNDTLSIEEGKLENASLMV 451
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: OQR93393.1 (hypothetical protein ACHHYP_02585 [Achlya hypogyna])

HSP 1 Score: 117.1 bits (292), Expect = 1.800e-22
Identity = 96/329 (29.18%), Postives = 142/329 (43.16%), Query Frame = 0 
Query:    6 DGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSA--GLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRT-QRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPAR 332
            D   L SF+A+   G D   AQ++LD TN  +E+A+ L++ESG                  D    A   S   +  G   +     +   +  N      +  +    A +P                           +H  A       R  +        + +S+LFQPP  L+FHGSFADAR  A E+KKWLLVNIQ E +F S MLNRD W+D+LV  ++  GF+FWQ+++         + A Y +                   LP + +LDPRT Q+L+ W    + P  + +KL++     S+D  ++  PPPR  P R
Sbjct:    2 DEEALTSFMAI--TGADAGTAQQYLDITNWHMEEAVNLFMESGGSXXXXXXXXXXPTAPYGDHEVRAPDPSKRQRLVGGDPFDSPRMFPAPQFFNRPTNLSRYNEFASSAPNPHSLVQQDFAQESIQRLA----------QHMNA------SRDDDDGPSRRDPQNLSQLFQPPASLMFHGSFADARRQALEQKKWLLVNIQDETVFASLMLNRDTWSDDLVQNLVASGFVFWQVASPVSTEHGKKFCALYQVSTDL---------------LPVVCILDPRTGQKLVEW-CNFIEPGTMTEKLSDFCCLNSMD--SAPAPPPRAQPVR 294
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_009533837.1 (hypothetical protein PHYSODRAFT_352438 [Phytophthora sojae] >EGZ11092.1 hypothetical protein PHYSODRAFT_352438 [Phytophthora sojae])

HSP 1 Score: 116.3 bits (290), Expect = 3.100e-22
Identity = 126/403 (31.27%), Postives = 174/403 (43.18%), Query Frame = 0 
Query:  172 ISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575
            +S LFQPP  ++F G++ADAR  AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          + + Y ++                  LP + ++DPRT  +    TG L P  + +KL++    ++LD           PP                         K+AEP+                  XXXXXXXXXXXXXXXXXXXXXX             XXXXXXXX   PV                                                L PEP  G   VTRV+ R+P G  LTRRFL  +P+A ++ +  +++ +  G            R F+L T +PP         D  ++ E KL+N+SL++
Sbjct:  176 LSTLFQPPTAIMFQGTYADARTLAKNEGKWLLVNIQDEIVFTSHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCSLYQID---------------RDSLPVVVIIDPRTGEIRQRWTGFLEPQDMTEKLSDFCCMHTLD----------APPTEQK---------------------KEAEPN---------------IMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPV----------------------------------------------VALTPEPDAGAPDVTRVQIRVPDGTRLTRRFLKTDPLAMVWTFVKDQVPEARG------------RAFELRTAFPPS---AVAYNDTLSIEEGKLENASLMV 456
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: ETI31733.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETK72110.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL25540.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL78754.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM32026.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETO60445.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP01533.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP29706.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297])

HSP 1 Score: 116.3 bits (290), Expect = 3.100e-22
Identity = 89/322 (27.64%), Postives = 134/322 (41.61%), Query Frame = 0 
Query:    3 AQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNP---FRHFGAEARGAFGRGGNPWDVAGG-----GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLD 317
            A D    L SF+++   G D   A +FL+ TN  +++A+ LY+ES   GG +  ++ +                                    ED N VR  D  K+QRL+                           +        FG     AFG   N  + A G        +S LFQPP  ++F G++ADAR  AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          + + Y ++                  LP + ++DPRT  +    TG   P  + +KL++    ++ D
Sbjct:    4 APDSQDALASFMSI--TGADSGSALQFLELTNWKLDEAVNLYMES---GGQSANTAFAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDNAVRAPDPSKRQRLVDSGMDLMRPMRHLRDQNRDFAAESIAAMTAGSISTAFGDPGAVAFGEASNNSNDADGTSTERTRDLSTLFQPPTAIMFQGTYADARTHAKNEGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCSLYQID---------------RDSLPIVVIIDPRTGEIRQRWTGFYEPQDMTEKLSDFCCMHTFD 305
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: CCA23196.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 115.9 bits (289), Expect = 4.100e-22
Identity = 96/353 (27.20%), Postives = 157/353 (44.48%), Query Frame = 0 
Query:   10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAE--ARGAFGRGGNPWD----VAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKD 357
            L SF+A+   G D   A ++L+ TN ++E+++ L++ESG   G   LS+T+   +   A+PD+                           + VR  D  K+QRL+                            N FR F AE  A      G  P +     +     ++ LF+ P++++F G++A+AR  AK   KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          +   Y ++                  LP IG++ PR+  ++    G L P  L +K+++ +   +L   T+             +Q  +  S D+ LA A+AAS+++
Sbjct:   43 LPSFMAI--TGTDSATATQYLELTNWNLEESVNLFMESGAEDG---LSTTTQHNTA--ASPDSG----------------------PNLNDKVRAPDPSKRQRLVGADLDFAPPPRRNQ--------------NRFRDFAAESVAAAITSDGVVPSESQDLSSQSSRNLNALFKSPMEIMFDGTYAEARQEAKSASKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQSFWATELGKKFCVLYRIDREC---------------LPFIGIIHPRSGEVLAQWNGFLEPVVLIEKISDFSCQNTLGSFTT--EKDTIDLMEEESQEAFSESVDDDLAAAIAASLEE 335
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_008915021.1 (hypothetical protein PPTG_18885 [Phytophthora parasitica INRA-310] >ETM99642.1 hypothetical protein PPTG_18885 [Phytophthora parasitica INRA-310])

HSP 1 Score: 115.9 bits (289), Expect = 4.100e-22
Identity = 158/563 (28.06%), Postives = 224/563 (39.79%), Query Frame = 0 
Query:   20 GIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNP---FRHFGAEARGAFGRGGNPWDVAGG-----GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575
            G D   A +FL+ TN  +++A+ LY+ES   GG +  ++ +                                    ED N VR  D  K+QRL+                           +        FG     AFG   N  + A G        +S LFQPP  ++F G++ADAR  AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          + + Y ++                  LP + ++DPRT  +    TG   P  + +KL++    ++ D  ++ +                                K+AEP      +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     PV                                                                   L PEP  G  GVTRV+ R+P G  LTRRFL  +P+A ++ +  +++             +   R F+L T +PP         D  ++ E KL+N+SL++
Sbjct:    5 GADSGSALQFLELTNWKLDEAVNLYMES---GGQSANTAFAAPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDNAVRAPDPSKRQRLVDSGMDLMRPMRHLRDQNRDFAAESIAAMTAGSISTAFGDPGAVAFGEASNNSNDADGTSTERTRDLSTLFQPPTAIMFQGTYADARTHAKNEGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCSLYQID---------------RDSLPIVVIIDPRTGEIRQRWTGFYEPQDMTEKLSDFCCMHTFDTPSTEI-------------------------------KKEAEPDIMDASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEPV-----------------------------------------------------------------VDLTPEPDAGAPGVTRVQIRVPDGSRLTRRFLKSDPLAMVWTFVKDQV------------SEARTRAFELRTSFPPS---AVAYNDTLSIEEGKLENASLMV 438
[Close]
BLAST of NO08G02880 vs. NCBI_GenBank
Match: GAX13739.1 (hypothetical protein FisN_30Lh026 [Fistulifera solaris])

HSP 1 Score: 115.9 bits (289), Expect = 4.100e-22
Identity = 106/361 (29.36%), Postives = 150/361 (41.55%), Query Frame = 0 
Query:    6 DGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFH-GSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTG-----ALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHST---QSEYDRSEDEQLALALAASMKDA 358
            D   +  FLA  G   DP  A  +L+ +  ++E A+ L+LE   GGG       SG+ + A+  P A  I A  + +   R  D+    + +D  P  +      +   A +                 XXX                           +      ++ +F PP  LL   G F  AR  AK+ K+WLLVNIQ++D F  H LNRDVW DELV  +I EGFIFWQ     PE  +Y+ RY +                    PH+ ++DPRT RL+W   G      +     A++  +  S  S D         RPP A       +   D SEDEQL  A+ AS++D+
Sbjct:    6 DDELVSQFLAFTGSA-DPSSATSYLEMSGGNLETAVSLFLEHQQGGG-------SGNETAAN--PFAEDIRAPDETR-TMRLMDDNTSLLHQD--PTFQLMSAMMEEQFAQTAFGGSSSRMTDVRAAVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQHNPPNLTDMFAPPDHLLHKAGGFQGARTMAKDSKRWLLVNIQKDDEFACHALNRDVWRDELVENLIREGFIFWQQRDITPEGQTYVERYKVT-----------------DYPHVAIIDPRTGRLVWKKEGWTMEQPMTADYFAERAMDFCSRNSFD---------RPPQAARPAGVKRPVQDMSEDEQLQAAMRASLQDS 327
The following BLAST results are available for this feature:
BLAST of NO08G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETI31731.11.700e-2328.10hypothetical protein F443_21327 [Phytophthora para... [more]
XP_019191423.12.200e-2329.17PREDICTED: plant UBX domain-containing protein 7 i... [more]
OWZ05553.12.800e-2327.86hypothetical protein PHMEG_00022336 [Phytophthora ... [more]
ETI31732.14.800e-2328.10hypothetical protein, variant 1 [Phytophthora para... [more]
OQR93393.11.800e-2229.18hypothetical protein ACHHYP_02585 [Achlya hypogyna... [more]
XP_009533837.13.100e-2231.27hypothetical protein PHYSODRAFT_352438 [Phytophtho... [more]
ETI31733.13.100e-2227.64hypothetical protein, variant 2 [Phytophthora para... [more]
CCA23196.14.100e-2227.20conserved hypothetical protein [Albugo laibachii N... [more]
XP_008915021.14.100e-2228.06hypothetical protein PPTG_18885 [Phytophthora para... [more]
GAX13739.14.100e-2229.36hypothetical protein FisN_30Lh026 [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008740NSK008740Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02880.1NO08G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553057gene_3620Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g197gene3779Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02880.1NO08G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02880 ID=NO08G02880|Name=NO08G02880|organism=Nannochloropsis oceanica|type=gene|length=1978bp
TCACGTGTTTATGCTCCGGCCTTCCACTAGTACAGGGTCACTTAAATCAA
CAAGTACACAAGCTGCAGCATCGACGACTGCTCCTTTCACATCCAGCGCC
CACAGTACCCTTGGCGTACACCACCCCCTCCCACTATGGCCGCCCAAGAC
GACGGCAGCCGTCTCCGGTCCTTCCTGGCTGTCATCGGGGACGGCATTGA
CCCCCAAGTTGCCCAACGCTTCCTTGATGCGACAAATAATGACGTGGAAC
AGGCCATCGAACTCTATCTAGAGAGCGGGGATGGTGGAGGCGGTGCTCCC
CTGTCTTCTACTAGCGGTGATACTTCTATTGCGGATGCTGCTCCTGACGC
CGCTGCAATCTCTGCGGCCGCTCAAGGAAAGGGAGATAGCAGGTATCGCG
ACGAGGAGGAATATGAGGTGGATGAGGATGGCAACCCTGTGCGGAAGGCG
GATCAAGTCAAAAAGCAGCGGCTTCTAGCTGTCAGCCCTTTGATGGGAGG
AGGAGGAGGAGGAGGTGGAGGAGGAGGTGGAGGCGGGGGAGGAGTGGGCT
ATCTCCCTGTCAACCCTTTTCGGCATTTTGGTGCGGAGGCAAGAGGCGCT
TTCGGTCGGGGTGGGAATCCATGGGATGTAGCGGGTGGAGGTGAGGGCAT
AAGCAAGCTGTTTCAACCTCCATTGCAATTGTTGTTTCATGGTAGTTTTG
CCGATGCCCGGGCCACGGCCAAGGAGAAAAAGAAATGGTTGTTGGTGAAC
ATTCAGAGAGAGGATATATTTGAGTCGCATATGCTCAACCGGGATGTGTG
GGCGGACGAGCTGGTTCATGCCATGATTCTAGAAGGTTTCATTTTTTGGC
AAATGAGTGCAGGGCTTCCGGAGGCTATGTCCTACCTTGCTCGGTATCAT
CTCGAGGACGACGGCAGCAGCCGCAACAACAACAACAACAACAATCAAAG
CGCGGGCCATCTACCTCATATAGGTGTGCTCGATCCTCGGACCCAACGGC
TGATGTGGTGGCATACTGGTGCCCTCCCTCCCCACCAGCTTGCAGATAAA
TTGACCGAAATTACGTCAACCTACTCCTTGGACGACCACACGTCCGTGCT
TCCTCCACCCCGTCCTCCCCCAGCACGTCATTCTACCCAGAGTGAGTATG
ATCGGTCGGAGGACGAACAGCTTGCATTGGCGTTGGCGGCATCTATGAAG
GATGCGGAGCCCTCGGAGGGAGGAGGAGGAAAGGAGGGAGGGAGGGCAGG
AGGACGAAATCATGAGATTGTCGAGTTGGATGATAGTGATGAGGACGAGA
ACGAGGGCGAGGATGACGGTGAGGATGATGACAAGGTGCTCTTCTCACCG
CCCGTGGAGAAGATGGGAGAAGGTGGGAATGAGGGAGGAATGGAAGGCAA
GGCTCCCCCTGTATATGATGTTCTGGACGACGACGAGGACGATTTTGTGG
ACACGACATCAACAACAGTAACACCAACAACAGGAACAACAGCAGCGACA
GCAACGACTGCATCAGTACCTTCCTTCCTCCCTTTTTCTCCTTACCTGTC
CTATGGTCTCGAGCCAGAGCCGGCGGTGGGAGGAGAAGGTGTGACACGGG
TGAGGTTTCGTTTACCACAAGGGAAAACTCTCACCCGCCGTTTCCTCGTC
GATAATCCCGTGGCTGCTCTGTATAAATATGCACACGAGGAGCTTGTGAA
AGAGAATGGGGAGATGGAAGGCATGGAAAGGAGGAAGGGAGGGCTTAGGA
AATTTGACTTAGTCACGATGTATCCGCCCAAGTTGTCCTTGGAGAAGGAG
ATGGGGGATGGGAAGACTTTGGGAGAGGCGAAGCTGCAAAATTCGTCATT
GGTGATGGTGTTGTTGCCTTGAGGGATGGAGGGACGTTTGGAGGGAGGTA
GTATAAGAGTGTGAAGGTAGGAGTGTGCAGGTAGGTACATATCAGTAGAA
GTGGAGGAGAAAGAAAGAAACGCTCTAC
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protein sequence of NO08G02880.1

>NO08G02880.1-protein ID=NO08G02880.1-protein|Name=NO08G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=579bp
MAAQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDG
GGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGN
PVRKADQVKKQRLLAVSPLMGGGGGGGGGGGGGGGGVGYLPVNPFRHFGA
EARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKK
WLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSY
LARYHLEDDGSSRNNNNNNNQSAGHLPHIGVLDPRTQRLMWWHTGALPPH
QLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALAL
AASMKDAEPSEGGGGKEGGRAGGRNHEIVELDDSDEDENEGEDDGEDDDK
VLFSPPVEKMGEGGNEGGMEGKAPPVYDVLDDDEDDFVDTTSTTVTPTTG
TTAATATTASVPSFLPFSPYLSYGLEPEPAVGGEGVTRVRFRLPQGKTLT
RRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKL
SLEKEMGDGKTLGEAKLQNSSLVMVLLP*
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Synonyms
Publications