NO08G02880, NO08G02880 (gene) Nannochloropsis oceanica

Overview
NameNO08G02880
Unique NameNO08G02880
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1978
Alignment locationchr8:809060..811037 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbx domain-containing protein 7
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:809060..811037 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-rel_dom
IPR036249Thioredoxin-like_sf
IPR006577UAS
IPR001012UBX_dom
IPR003903UIM_dom
Homology
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_005852514.1 (ubx domain-containing protein 7, partial [Nannochloropsis gaditana CCMP526] >EKU23317.1 ubx domain-containing protein 7, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 343.2 bits (879), Expect = 1.600e-90
Identity = 186/317 (58.68%), Postives = 219/317 (69.09%), Query Frame = 0
Query:    4 QDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTS 321
            Q D S L  FL V GDG+DP VAQ FLDA + +VE+A+ELYL+SG G    P++  +   + A   P +  +             DEE+ ++DE+G PVRKADQVKKQRLL V                      + P+NPFRHFGAEARG+FGRGG+PW   GGG GISKLFQPPL ++FHG+FADARATA+E  KWLLVNIQREDIF SHMLNRDVWADELV A++ EGF+FWQMSAGLPEAMSY+ARYHL+                GHLPHIGVLDPRTQRL+W H GAL P QLA+KLTE+TSTYSL DHT+
Sbjct:    5 QPDQSGLDRFLMVAGDGVDPHVAQNFLDAGSGNVERALELYLDSG-GHMPEPVAGNAPRPAHAPHLPSSQQLHDV----------DEEDNDLDEEGRPVRKADQVKKQRLLGVGLGGADRSEDGGEGGSEVGLL-FHPLNPFRHFGAEARGSFGRGGDPWG-RGGGGGISKLFQPPLHMIFHGNFADARATAREGNKWLLVNIQREDIFASHMLNRDVWADELVQALVREGFVFWQMSAGLPEAMSYVARYHLD---AVEGNSKDCSGGDGHLPHIGVLDPRTQRLLWSHAGALSPAQLAEKLTEVTSTYSLTDHTT 305          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: EWM26616.1 (hypothetical protein Naga_100001g197 [Nannochloropsis gaditana])

HSP 1 Score: 330.1 bits (845), Expect = 1.400e-86
Identity = 187/336 (55.65%), Postives = 222/336 (66.07%), Query Frame = 0
Query:    4 QDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTY---SLDDHTSVLPPPRPPPARHSTQS 337
            Q D S L  FL V GDG+DP VAQ FLDA + +VE+A+ELYL+SG G    P++  +   + A   P +  +             DEE+ ++DE+G PVRKADQVKKQRLL V                      + P+NPFRHFGAEARG+FGRGG+PW   GGG GISKLFQPPL ++FHG+FADARATA+E  KWLLVNIQREDIF SHMLNRDVWADELV A++ EGF+FWQMSAGLPEAMSY+ARYHL+                GHLPHIGVLDPRTQRL+W H GAL P QLA+KLTE+TST    + DD +S     RP   R   +S
Sbjct:    5 QPDQSGLDRFLMVAGDGVDPHVAQNFLDAGSGNVERALELYLDSG-GHMPEPVAGNAPRPAHAPHLPSSQQLHDV----------DEEDNDLDEEGRPVRKADQVKKQRLLGVGLGGADRSEDGGEGGSEVGLL-FHPLNPFRHFGAEARGSFGRGGDPWG-RGGGGGISKLFQPPLHMIFHGNFADARATAREGNKWLLVNIQREDIFASHMLNRDVWADELVQALVREGFVFWQMSAGLPEAMSYVARYHLD---AVEGNSKDCSGGDGHLPHIGVLDPRTQRLLWSHAGALSPAQLAEKLTEVTSTARGDARDDTSSTGTEARPAVLRGEPRS 324          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_002900938.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY59328.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 137.1 bits (344), Expect = 1.700e-28
Identity = 151/574 (26.31%), Postives = 222/574 (38.68%), Query Frame = 0
Query:   10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNP---FRHFGAEARGAFGRGGNPWDVAGGGEG------ISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575
            L +F+++   G D   A +FL+ +N  +++A+ LY+ES   GG +  ++ +                                    ED N VR  D  K+QRL+                           +        FG     AFG   N  D  G G G      +S LFQPP  ++F G++ADAR  AK + KWLLVNIQ E +F SHMLNRD W+D++V  ++  GF+FWQ          +   Y ++                  LP + ++DPRT       TG   P  + +KL++    ++LD        P     + +  S  D SED+QLA A+AAS+++ E                             XXXXXXXXXXXXX    P VE                                                                  L PEP     GVTRV+ R+P G  LTRRFL ++P+A ++ +  +++ +               R F+L T +PP         D  ++ E KL+N+SL++
Sbjct:   11 LAAFMSI--TGADSGSALQFLELSNWKLDEAVNLYMES---GGQSASTAFAAPHQRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDDNAVRAPDPSKRQRLVDSGADLLRPMRHLRDQNRDFAAESIAAMTAGSISTAFGGAGAVAFGEASNNLD-GGDGAGNERTRDLSTLFQPPTAIMFQGTYADARTHAKNEGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCTLYQID---------------RDSLPIVVIIDPRTGETRQRWTGFHEPQDMTEKLSDFCCMHTLD-------TPSTEQKKEAEPSIMDASEDDQLAAAIAASLQNGE-----------------------GETKRNXXXXXXXXXXXXXXXXXPVVE------------------------------------------------------------------LTPEPDASAPGVTRVQIRVPDGSRLTRRFLKNDPLAMVWAFVKDQIPEARA------------RAFELRTAFPPS---AVAYNDTISIEEGKLENASLMV 452          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_008617322.1 (hypothetical protein SDRG_13017 [Saprolegnia diclina VS20] >XP_008617323.1 hypothetical protein, variant [Saprolegnia diclina VS20] >EQC29144.1 hypothetical protein SDRG_13017 [Saprolegnia diclina VS20] >EQC29145.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 135.6 bits (340), Expect = 5.000e-28
Identity = 106/344 (30.81%), Postives = 150/344 (43.60%), Query Frame = 0
Query:   10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRH------------------FGAEARGAFGRGGNPWDVAGGG-------EGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRT-QRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRP 328
            L +F+A+   G D   AQ++LD TN  VE+A+ L++ESG  G                          AA G+  + Y D++          VR  D  K+QRL+   P                      PVN  R+                  F  E+     +  N    A          + +S+LFQPP  L+FHGSFADAR  A E++KWLLVNIQ E +F S MLNRD W+D+LV  ++  GF+FWQ  A       + A Y ++                G LP + +LDPRT Q+L+ WH   + P  + +KL++     S++      PP RP
Sbjct:    6 LTNFMAI--TGADAGTAQQYLDITNWHVEEAVNLFMESGGSG--------------------------AASGQASAPYGDDD----------VRAPDAAKRQRLVGGDPYDSPRMFPAPQFFTR-------PVNVSRYNDFTSGGGLNAHGLVQQDFAQESIERLAQHMNSSRQADSDAPSQRDPQNLSQLFQPPTSLMFHGSFADARRHATEQQKWLLVNIQDETVFASLMLNRDTWSDDLVQNLVASGFVFWQTPANNEHGKKFCALYQVD---------------EGLLPIVCILDPRTGQKLVEWH-NFIEPGTMTEKLSDFCCLNSME----TTPPARP 284          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_002177387.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51850.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 129.0 bits (323), Expect = 4.700e-26
Identity = 77/193 (39.90%), Postives = 101/193 (52.33%), Query Frame = 0
Query:  172 ISKLFQPPLQLLF-HGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQL-ADKLTEITSTY-SLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSE 362
            +S LF  P ++LF +G F +AR TAK+ ++WLLVNIQR+  F SH LNRDVW DELV  ++ EGFIFWQ      E  +Y  RY +                    PHIG++DPRT RL+W   G    + + A+   E+   + S +        PRP  AR   +     SEDEQL  A+ ASM D    E
Sbjct:  169 LSDLFAAPTEILFKNGGFQNARTTAKDSRRWLLVNIQRDAEFASHALNRDVWRDELVENLVREGFIFWQTMDQTAEGRTYTERYQVH-----------------DFPHIGIVDPRTGRLLWRKEGWTQANPMTAELFAEMAMDFCSRNSFDRAPQAPRPSGARVPKRPMQQMSEDEQLQAAMRASMGDVVADE 344          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_024585682.1 (Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Plasmopara halstedii] >CEG49313.1 Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Plasmopara halstedii])

HSP 1 Score: 127.5 bits (319), Expect = 1.400e-25
Identity = 138/587 (23.51%), Postives = 217/587 (36.97%), Query Frame = 0
Query:   10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGG-------------APLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGG-----NPWDVAGG----GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575
            L SF+++   G +   A +FL+ TN ++++A+ L++ESG                  +P S     TS  D     AA  AAA G               ED N VR  D  K+QRL+                           +       +    AFG  G     N    A G      G++ L+QPP  ++F GS+A+AR  AK + KWLLVNIQ E +F SHMLNRD W+D++V   +  GF+FWQ          + + Y ++                  LP + ++DPRT  +    +G   P  + +KL++    +++D           P          D SED+QLA A+AAS++D +  E                                             V++ G+         ++                                                   L PEP      VTR++ R+P G  LTRRF   + +A ++ +  +++ +              LR F+L T +PP      +M    ++ E KL+N+SL++
Sbjct:   11 LASFMSI--TGANSGTALQFLELTNWNLDEAVNLFMESGRQNSSSAFIAPHQTAAQPSPASHHPVPTSSMDIDAATAAAIAAAYG---------------EDDNAVRAPDPSKRQRLVDSDMGLMQPMRHLRDQNRDFAAESIAAIT-----ASSISTAFGSLGAVESTNNLSNADGHVNEHTGLNTLYQPPTNIMFLGSYAEARTNAKFQGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNFVASGFVFWQNYWTWEHGKKFCSLYQID---------------RDSLPIVMIIDPRTGEIQQRWSGFYEPQDMTEKLSDFCCMHTIDKSMIEQKKEAKPDL-------LDVSEDDQLAAAIAASIQDNDNGE---------------------------------------------VKQAGDPMEFEEKAQQS------------------------------------------------LVALTPEPDACAPDVTRIQIRVPDGSRLTRRFFKTDSLAMVWTFVKDQIPEAR------------LRAFELRTAFPPGAVAYNDM---LSIEEGKLENASLMV 445          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_012206590.1 (hypothetical protein SPRG_10988 [Saprolegnia parasitica CBS 223.65] >KDO22673.1 hypothetical protein SPRG_10988 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 125.9 bits (315), Expect = 3.900e-25
Identity = 105/322 (32.61%), Postives = 144/322 (44.72%), Query Frame = 0
Query:   20 GIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTS-GDTSIADAAPDAAAISAAAQGKG-DSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRT-QRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRP-------PPAR 332
            G D   AQ++LD TN  +E+A+ L++ESG  G  +  +STS GD  +   APDAA       G   DS             GN  R  D      L A                          +N  R   ++A                 + +S+LFQPP  L+FHGSFADAR  A E++KWLLVNIQ E +F S MLNRD W+D+LV  ++  GF+FWQ  A       + A Y ++                G LP + +LDPRT  +L+ WH   + P  + +KL++      ++      PP RP       PPAR
Sbjct:    5 GADAGTAQQYLDITNWHMEEAVNLFMESGGSGAASGQASTSYGDDDV--RAPDAAKRQRLVGGDPYDSPRMFPAPQFFTRPGNVSRYNDFTSAGGLNAHGLVQQDFAQESIERLAQ-------QMNSSRQPDSDA-----------SARRDPQNLSQLFQPPTGLMFHGSFADARRHATEQRKWLLVNIQDETVFASLMLNRDTWSDDLVQNLVASGFVFWQTPANNEHGKKFCALYQVD---------------EGLLPIVCILDPRTGAKLVEWH-NFIEPGVMTEKLSDFCCLNDME----TAPPARPQAQAAPAPPAR 286          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: OEU16548.1 (hypothetical protein FRACYDRAFT_225735 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 123.2 bits (308), Expect = 2.600e-24
Identity = 77/197 (39.09%), Postives = 100/197 (50.76%), Query Frame = 0
Query:  175 LFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTG-----ALPPHQLADKLTEITSTYSLDDHTSVLPP--PRPPPARHSTQSE--------YDRSEDEQLALALAASMKD 357
            +F PP  LL + +F  ARA AK+ K+WLLVNIQR++ F  H LNRDVW DELV  +I EGFIFWQ      E   Y  RY +                    PH+G++DPRT+RLMW   G      L   Q ++   +  S +S D      PP  PRP    +ST +          + SEDEQL  A+ AS+ +
Sbjct:  179 MFAPPRHLLCNENFEGARAMAKDSKRWLLVNIQRDNEFSCHALNRDVWRDELVENLIGEGFIFWQKFDATSEGSVYAERYKV-----------------SDYPHVGIIDPRTRRLMWKKEGWTQQNPLTAGQFSEYAMDFCSRHSFD-----RPPQAPRPSSTANSTATAGLPTKRPMQEMSEDEQLQAAMRASLTE 353          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: GAX21826.1 (hypothetical protein FisN_30Hh026 [Fistulifera solaris])

HSP 1 Score: 122.1 bits (305), Expect = 5.700e-24
Identity = 74/191 (38.74%), Postives = 97/191 (50.79%), Query Frame = 0
Query:  172 ISKLFQPPLQLLFH-GSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTG-----ALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKD 357
            ++ +F PP  LL   G F  AR  AK+ K+WLLVNIQ++D F  H LNRDVW DELV  +I EGFIFWQ     PE  +Y+ RY +                    PH+ ++DPRT RL+W   G      +     A++  +  S  S D    V    RP   +   Q   D SEDEQL  A+ AS++D
Sbjct:  146 LTDMFAPPDHLLHKAGGFQGARTMAKDSKRWLLVNIQKDDEFACHALNRDVWRDELVENLIREGFIFWQQRDITPEGQTYVERYKVT-----------------DYPHVAIIDPRTGRLVWKKEGWTMERPMTADYFAERAMDFCSRNSFDRPPQV---ARPAGVKRPVQ---DMSEDEQLQAAMKASLQD 313          
BLAST of NO08G02880 vs. NCBI_GenBank
Match: CCI43060.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 120.9 bits (302), Expect = 1.300e-23
Identity = 103/367 (28.07%), Postives = 156/367 (42.51%), Query Frame = 0
Query:    1 MAAQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISK-------LFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPS 361
            M+ Q     L SF+ +   G D   A ++L+ TN ++E+++ LY+ESG   G A    T+     A++    + I+                       + VR  D  K+QRL+                            N FR F AE+  A          A  GE  S+       LF+PP +L F GS+A+AR  AK   KWLLVNIQ E +F SHMLNRD W+D++V  ++  GFIFWQ            A Y ++                  LP IG++ PRT  ++    G + P  L +K+++      L+   + +           ++   D +ED  LA A+AAS+++   S
Sbjct:    1 MSQQLSADALPSFMNI--TGTDTATATQYLELTNWNLEESVNLYMESGAEDGHA----TTMQQDTANSPHSGSNIN-----------------------DDVRAPDPSKRQRLVGADLNFEAPQRRSQ--------------NRFRDFAAESVAAAISSDGMISSAFQGEASSQSSQNLNALFKPPSELTFDGSYAEARQAAKSAAKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFIFWQSFWASESGKKVCALYQIDRDC---------------LPFIGIIHPRTGEILAQWNGFVEPTILVEKISDFCCQNILE---NTVEKETINLVEEESRESLDENEDPNLAAAIAASLEEKSKS 306          
The following BLAST results are available for this feature:
BLAST of NO08G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005852514.11.600e-9058.68ubx domain-containing protein 7, partial [Nannochl... [more]
EWM26616.11.400e-8655.65hypothetical protein Naga_100001g197 [Nannochlorop... [more]
XP_002900938.11.700e-2826.31conserved hypothetical protein [Phytophthora infes... [more]
XP_008617322.15.000e-2830.81hypothetical protein SDRG_13017 [Saprolegnia dicli... [more]
XP_002177387.14.700e-2639.90predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_024585682.11.400e-2523.51Predicted ubiquitin regulatory protein, contains U... [more]
XP_012206590.13.900e-2532.61hypothetical protein SPRG_10988 [Saprolegnia paras... [more]
OEU16548.12.600e-2439.09hypothetical protein FRACYDRAFT_225735 [Fragilario... [more]
GAX21826.15.700e-2438.74hypothetical protein FisN_30Hh026 [Fistulifera sol... [more]
CCI43060.11.300e-2328.07unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008740NSK008740Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02880.1NO08G02880.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553057gene_3620Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g197gene3779Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02880.1NO08G02880.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02880 ID=NO08G02880|Name=NO08G02880|organism=Nannochloropsis oceanica|type=gene|length=1978bp
TCACGTGTTTATGCTCCGGCCTTCCACTAGTACAGGGTCACTTAAATCAA
CAAGTACACAAGCTGCAGCATCGACGACTGCTCCTTTCACATCCAGCGCC
CACAGTACCCTTGGCGTACACCACCCCCTCCCACTATGGCCGCCCAAGAC
GACGGCAGCCGTCTCCGGTCCTTCCTGGCTGTCATCGGGGACGGCATTGA
CCCCCAAGTTGCCCAACGCTTCCTTGATGCGACAAATAATGACGTGGAAC
AGGCCATCGAACTCTATCTAGAGAGCGGGGATGGTGGAGGCGGTGCTCCC
CTGTCTTCTACTAGCGGTGATACTTCTATTGCGGATGCTGCTCCTGACGC
CGCTGCAATCTCTGCGGCCGCTCAAGGAAAGGGAGATAGCAGGTATCGCG
ACGAGGAGGAATATGAGGTGGATGAGGATGGCAACCCTGTGCGGAAGGCG
GATCAAGTCAAAAAGCAGCGGCTTCTAGCTGTCAGCCCTTTGATGGGAGG
AGGAGGAGGAGGAGGTGGAGGAGGAGGTGGAGGCGGGGGAGGAGTGGGCT
ATCTCCCTGTCAACCCTTTTCGGCATTTTGGTGCGGAGGCAAGAGGCGCT
TTCGGTCGGGGTGGGAATCCATGGGATGTAGCGGGTGGAGGTGAGGGCAT
AAGCAAGCTGTTTCAACCTCCATTGCAATTGTTGTTTCATGGTAGTTTTG
CCGATGCCCGGGCCACGGCCAAGGAGAAAAAGAAATGGTTGTTGGTGAAC
ATTCAGAGAGAGGATATATTTGAGTCGCATATGCTCAACCGGGATGTGTG
GGCGGACGAGCTGGTTCATGCCATGATTCTAGAAGGTTTCATTTTTTGGC
AAATGAGTGCAGGGCTTCCGGAGGCTATGTCCTACCTTGCTCGGTATCAT
CTCGAGGACGACGGCAGCAGCCGCAACAACAACAACAACAACAATCAAAG
CGCGGGCCATCTACCTCATATAGGTGTGCTCGATCCTCGGACCCAACGGC
TGATGTGGTGGCATACTGGTGCCCTCCCTCCCCACCAGCTTGCAGATAAA
TTGACCGAAATTACGTCAACCTACTCCTTGGACGACCACACGTCCGTGCT
TCCTCCACCCCGTCCTCCCCCAGCACGTCATTCTACCCAGAGTGAGTATG
ATCGGTCGGAGGACGAACAGCTTGCATTGGCGTTGGCGGCATCTATGAAG
GATGCGGAGCCCTCGGAGGGAGGAGGAGGAAAGGAGGGAGGGAGGGCAGG
AGGACGAAATCATGAGATTGTCGAGTTGGATGATAGTGATGAGGACGAGA
ACGAGGGCGAGGATGACGGTGAGGATGATGACAAGGTGCTCTTCTCACCG
CCCGTGGAGAAGATGGGAGAAGGTGGGAATGAGGGAGGAATGGAAGGCAA
GGCTCCCCCTGTATATGATGTTCTGGACGACGACGAGGACGATTTTGTGG
ACACGACATCAACAACAGTAACACCAACAACAGGAACAACAGCAGCGACA
GCAACGACTGCATCAGTACCTTCCTTCCTCCCTTTTTCTCCTTACCTGTC
CTATGGTCTCGAGCCAGAGCCGGCGGTGGGAGGAGAAGGTGTGACACGGG
TGAGGTTTCGTTTACCACAAGGGAAAACTCTCACCCGCCGTTTCCTCGTC
GATAATCCCGTGGCTGCTCTGTATAAATATGCACACGAGGAGCTTGTGAA
AGAGAATGGGGAGATGGAAGGCATGGAAAGGAGGAAGGGAGGGCTTAGGA
AATTTGACTTAGTCACGATGTATCCGCCCAAGTTGTCCTTGGAGAAGGAG
ATGGGGGATGGGAAGACTTTGGGAGAGGCGAAGCTGCAAAATTCGTCATT
GGTGATGGTGTTGTTGCCTTGAGGGATGGAGGGACGTTTGGAGGGAGGTA
GTATAAGAGTGTGAAGGTAGGAGTGTGCAGGTAGGTACATATCAGTAGAA
GTGGAGGAGAAAGAAAGAAACGCTCTAC
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protein sequence of NO08G02880.1

>NO08G02880.1-protein ID=NO08G02880.1-protein|Name=NO08G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=579bp
MAAQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDG
GGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGN
PVRKADQVKKQRLLAVSPLMGGGGGGGGGGGGGGGGVGYLPVNPFRHFGA
EARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKK
WLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSY
LARYHLEDDGSSRNNNNNNNQSAGHLPHIGVLDPRTQRLMWWHTGALPPH
QLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALAL
AASMKDAEPSEGGGGKEGGRAGGRNHEIVELDDSDEDENEGEDDGEDDDK
VLFSPPVEKMGEGGNEGGMEGKAPPVYDVLDDDEDDFVDTTSTTVTPTTG
TTAATATTASVPSFLPFSPYLSYGLEPEPAVGGEGVTRVRFRLPQGKTLT
RRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKL
SLEKEMGDGKTLGEAKLQNSSLVMVLLP*
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Synonyms
Publications