NO08G02880, NO08G02880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_005852514.1 (ubx domain-containing protein 7, partial [Nannochloropsis gaditana CCMP526] >EKU23317.1 ubx domain-containing protein 7, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 343.2 bits (879), Expect = 1.600e-90 Identity = 186/317 (58.68%), Postives = 219/317 (69.09%), Query Frame = 0 Query: 4 QDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTS 321 Q D S L FL V GDG+DP VAQ FLDA + +VE+A+ELYL+SG G P++ + + A P + + DEE+ ++DE+G PVRKADQVKKQRLL V + P+NPFRHFGAEARG+FGRGG+PW GGG GISKLFQPPL ++FHG+FADARATA+E KWLLVNIQREDIF SHMLNRDVWADELV A++ EGF+FWQMSAGLPEAMSY+ARYHL+ GHLPHIGVLDPRTQRL+W H GAL P QLA+KLTE+TSTYSL DHT+ Sbjct: 5 QPDQSGLDRFLMVAGDGVDPHVAQNFLDAGSGNVERALELYLDSG-GHMPEPVAGNAPRPAHAPHLPSSQQLHDV----------DEEDNDLDEEGRPVRKADQVKKQRLLGVGLGGADRSEDGGEGGSEVGLL-FHPLNPFRHFGAEARGSFGRGGDPWG-RGGGGGISKLFQPPLHMIFHGNFADARATAREGNKWLLVNIQREDIFASHMLNRDVWADELVQALVREGFVFWQMSAGLPEAMSYVARYHLD---AVEGNSKDCSGGDGHLPHIGVLDPRTQRLLWSHAGALSPAQLAEKLTEVTSTYSLTDHTT 305
BLAST of NO08G02880 vs. NCBI_GenBank
Match: EWM26616.1 (hypothetical protein Naga_100001g197 [Nannochloropsis gaditana]) HSP 1 Score: 330.1 bits (845), Expect = 1.400e-86 Identity = 187/336 (55.65%), Postives = 222/336 (66.07%), Query Frame = 0 Query: 4 QDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTY---SLDDHTSVLPPPRPPPARHSTQS 337 Q D S L FL V GDG+DP VAQ FLDA + +VE+A+ELYL+SG G P++ + + A P + + DEE+ ++DE+G PVRKADQVKKQRLL V + P+NPFRHFGAEARG+FGRGG+PW GGG GISKLFQPPL ++FHG+FADARATA+E KWLLVNIQREDIF SHMLNRDVWADELV A++ EGF+FWQMSAGLPEAMSY+ARYHL+ GHLPHIGVLDPRTQRL+W H GAL P QLA+KLTE+TST + DD +S RP R +S Sbjct: 5 QPDQSGLDRFLMVAGDGVDPHVAQNFLDAGSGNVERALELYLDSG-GHMPEPVAGNAPRPAHAPHLPSSQQLHDV----------DEEDNDLDEEGRPVRKADQVKKQRLLGVGLGGADRSEDGGEGGSEVGLL-FHPLNPFRHFGAEARGSFGRGGDPWG-RGGGGGISKLFQPPLHMIFHGNFADARATAREGNKWLLVNIQREDIFASHMLNRDVWADELVQALVREGFVFWQMSAGLPEAMSYVARYHLD---AVEGNSKDCSGGDGHLPHIGVLDPRTQRLLWSHAGALSPAQLAEKLTEVTSTARGDARDDTSSTGTEARPAVLRGEPRS 324
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_002900938.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY59328.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 137.1 bits (344), Expect = 1.700e-28 Identity = 151/574 (26.31%), Postives = 222/574 (38.68%), Query Frame = 0 Query: 10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNP---FRHFGAEARGAFGRGGNPWDVAGGGEG------ISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575 L +F+++ G D A +FL+ +N +++A+ LY+ES GG + ++ + ED N VR D K+QRL+ + FG AFG N D G G G +S LFQPP ++F G++ADAR AK + KWLLVNIQ E +F SHMLNRD W+D++V ++ GF+FWQ + Y ++ LP + ++DPRT TG P + +KL++ ++LD P + + S D SED+QLA A+AAS+++ E XXXXXXXXXXXXX P VE L PEP GVTRV+ R+P G LTRRFL ++P+A ++ + +++ + R F+L T +PP D ++ E KL+N+SL++ Sbjct: 11 LAAFMSI--TGADSGSALQFLELSNWKLDEAVNLYMES---GGQSASTAFAAPHQRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDDNAVRAPDPSKRQRLVDSGADLLRPMRHLRDQNRDFAAESIAAMTAGSISTAFGGAGAVAFGEASNNLD-GGDGAGNERTRDLSTLFQPPTAIMFQGTYADARTHAKNEGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFVFWQNYWASEHGKKFCTLYQID---------------RDSLPIVVIIDPRTGETRQRWTGFHEPQDMTEKLSDFCCMHTLD-------TPSTEQKKEAEPSIMDASEDDQLAAAIAASLQNGE-----------------------GETKRNXXXXXXXXXXXXXXXXXPVVE------------------------------------------------------------------LTPEPDASAPGVTRVQIRVPDGSRLTRRFLKNDPLAMVWAFVKDQIPEARA------------RAFELRTAFPPS---AVAYNDTISIEEGKLENASLMV 452
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_008617322.1 (hypothetical protein SDRG_13017 [Saprolegnia diclina VS20] >XP_008617323.1 hypothetical protein, variant [Saprolegnia diclina VS20] >EQC29144.1 hypothetical protein SDRG_13017 [Saprolegnia diclina VS20] >EQC29145.1 hypothetical protein, variant [Saprolegnia diclina VS20]) HSP 1 Score: 135.6 bits (340), Expect = 5.000e-28 Identity = 106/344 (30.81%), Postives = 150/344 (43.60%), Query Frame = 0 Query: 10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRH------------------FGAEARGAFGRGGNPWDVAGGG-------EGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRT-QRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRP 328 L +F+A+ G D AQ++LD TN VE+A+ L++ESG G AA G+ + Y D++ VR D K+QRL+ P PVN R+ F E+ + N A + +S+LFQPP L+FHGSFADAR A E++KWLLVNIQ E +F S MLNRD W+D+LV ++ GF+FWQ A + A Y ++ G LP + +LDPRT Q+L+ WH + P + +KL++ S++ PP RP Sbjct: 6 LTNFMAI--TGADAGTAQQYLDITNWHVEEAVNLFMESGGSG--------------------------AASGQASAPYGDDD----------VRAPDAAKRQRLVGGDPYDSPRMFPAPQFFTR-------PVNVSRYNDFTSGGGLNAHGLVQQDFAQESIERLAQHMNSSRQADSDAPSQRDPQNLSQLFQPPTSLMFHGSFADARRHATEQQKWLLVNIQDETVFASLMLNRDTWSDDLVQNLVASGFVFWQTPANNEHGKKFCALYQVD---------------EGLLPIVCILDPRTGQKLVEWH-NFIEPGTMTEKLSDFCCLNSME----TTPPARP 284
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_002177387.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51850.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 129.0 bits (323), Expect = 4.700e-26 Identity = 77/193 (39.90%), Postives = 101/193 (52.33%), Query Frame = 0 Query: 172 ISKLFQPPLQLLF-HGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQL-ADKLTEITSTY-SLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSE 362 +S LF P ++LF +G F +AR TAK+ ++WLLVNIQR+ F SH LNRDVW DELV ++ EGFIFWQ E +Y RY + PHIG++DPRT RL+W G + + A+ E+ + S + PRP AR + SEDEQL A+ ASM D E Sbjct: 169 LSDLFAAPTEILFKNGGFQNARTTAKDSRRWLLVNIQRDAEFASHALNRDVWRDELVENLVREGFIFWQTMDQTAEGRTYTERYQVH-----------------DFPHIGIVDPRTGRLLWRKEGWTQANPMTAELFAEMAMDFCSRNSFDRAPQAPRPSGARVPKRPMQQMSEDEQLQAAMRASMGDVVADE 344
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_024585682.1 (Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Plasmopara halstedii] >CEG49313.1 Predicted ubiquitin regulatory protein, contains UAS and UBX domains [Plasmopara halstedii]) HSP 1 Score: 127.5 bits (319), Expect = 1.400e-25 Identity = 138/587 (23.51%), Postives = 217/587 (36.97%), Query Frame = 0 Query: 10 LRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGG-------------APLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGG-----NPWDVAGG----GEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPSEGGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLFSPPVEKMGEGXXXXXXXXKAPPVYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLEPEPAVGGEGVTRVRFRLPQGKTLTRRFLVDNPVAALYKYAHEELVKENGEMEGMERRKGGLRKFDLVTMYPPKLSLEKEMGDGKTLGEAKLQNSSLVM 575 L SF+++ G + A +FL+ TN ++++A+ L++ESG +P S TS D AA AAA G ED N VR D K+QRL+ + + AFG G N A G G++ L+QPP ++F GS+A+AR AK + KWLLVNIQ E +F SHMLNRD W+D++V + GF+FWQ + + Y ++ LP + ++DPRT + +G P + +KL++ +++D P D SED+QLA A+AAS++D + E V++ G+ ++ L PEP VTR++ R+P G LTRRF + +A ++ + +++ + LR F+L T +PP +M ++ E KL+N+SL++ Sbjct: 11 LASFMSI--TGANSGTALQFLELTNWNLDEAVNLFMESGRQNSSSAFIAPHQTAAQPSPASHHPVPTSSMDIDAATAAAIAAAYG---------------EDDNAVRAPDPSKRQRLVDSDMGLMQPMRHLRDQNRDFAAESIAAIT-----ASSISTAFGSLGAVESTNNLSNADGHVNEHTGLNTLYQPPTNIMFLGSYAEARTNAKFQGKWLLVNIQDEIVFASHMLNRDTWSDDVVQNFVASGFVFWQNYWTWEHGKKFCSLYQID---------------RDSLPIVMIIDPRTGEIQQRWSGFYEPQDMTEKLSDFCCMHTIDKSMIEQKKEAKPDL-------LDVSEDDQLAAAIAASIQDNDNGE---------------------------------------------VKQAGDPMEFEEKAQQS------------------------------------------------LVALTPEPDACAPDVTRIQIRVPDGSRLTRRFFKTDSLAMVWTFVKDQIPEAR------------LRAFELRTAFPPGAVAYNDM---LSIEEGKLENASLMV 445
BLAST of NO08G02880 vs. NCBI_GenBank
Match: XP_012206590.1 (hypothetical protein SPRG_10988 [Saprolegnia parasitica CBS 223.65] >KDO22673.1 hypothetical protein SPRG_10988 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 125.9 bits (315), Expect = 3.900e-25 Identity = 105/322 (32.61%), Postives = 144/322 (44.72%), Query Frame = 0 Query: 20 GIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTS-GDTSIADAAPDAAAISAAAQGKG-DSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISKLFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRT-QRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRP-------PPAR 332 G D AQ++LD TN +E+A+ L++ESG G + +STS GD + APDAA G DS GN R D L A +N R ++A + +S+LFQPP L+FHGSFADAR A E++KWLLVNIQ E +F S MLNRD W+D+LV ++ GF+FWQ A + A Y ++ G LP + +LDPRT +L+ WH + P + +KL++ ++ PP RP PPAR Sbjct: 5 GADAGTAQQYLDITNWHMEEAVNLFMESGGSGAASGQASTSYGDDDV--RAPDAAKRQRLVGGDPYDSPRMFPAPQFFTRPGNVSRYNDFTSAGGLNAHGLVQQDFAQESIERLAQ-------QMNSSRQPDSDA-----------SARRDPQNLSQLFQPPTGLMFHGSFADARRHATEQRKWLLVNIQDETVFASLMLNRDTWSDDLVQNLVASGFVFWQTPANNEHGKKFCALYQVD---------------EGLLPIVCILDPRTGAKLVEWH-NFIEPGVMTEKLSDFCCLNDME----TAPPARPQAQAAPAPPAR 286
BLAST of NO08G02880 vs. NCBI_GenBank
Match: OEU16548.1 (hypothetical protein FRACYDRAFT_225735 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 123.2 bits (308), Expect = 2.600e-24 Identity = 77/197 (39.09%), Postives = 100/197 (50.76%), Query Frame = 0 Query: 175 LFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTG-----ALPPHQLADKLTEITSTYSLDDHTSVLPP--PRPPPARHSTQSE--------YDRSEDEQLALALAASMKD 357 +F PP LL + +F ARA AK+ K+WLLVNIQR++ F H LNRDVW DELV +I EGFIFWQ E Y RY + PH+G++DPRT+RLMW G L Q ++ + S +S D PP PRP +ST + + SEDEQL A+ AS+ + Sbjct: 179 MFAPPRHLLCNENFEGARAMAKDSKRWLLVNIQRDNEFSCHALNRDVWRDELVENLIGEGFIFWQKFDATSEGSVYAERYKV-----------------SDYPHVGIIDPRTRRLMWKKEGWTQQNPLTAGQFSEYAMDFCSRHSFD-----RPPQAPRPSSTANSTATAGLPTKRPMQEMSEDEQLQAAMRASLTE 353
BLAST of NO08G02880 vs. NCBI_GenBank
Match: GAX21826.1 (hypothetical protein FisN_30Hh026 [Fistulifera solaris]) HSP 1 Score: 122.1 bits (305), Expect = 5.700e-24 Identity = 74/191 (38.74%), Postives = 97/191 (50.79%), Query Frame = 0 Query: 172 ISKLFQPPLQLLFH-GSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTG-----ALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKD 357 ++ +F PP LL G F AR AK+ K+WLLVNIQ++D F H LNRDVW DELV +I EGFIFWQ PE +Y+ RY + PH+ ++DPRT RL+W G + A++ + S S D V RP + Q D SEDEQL A+ AS++D Sbjct: 146 LTDMFAPPDHLLHKAGGFQGARTMAKDSKRWLLVNIQKDDEFACHALNRDVWRDELVENLIREGFIFWQQRDITPEGQTYVERYKVT-----------------DYPHVAIIDPRTGRLVWKKEGWTMERPMTADYFAERAMDFCSRNSFDRPPQV---ARPAGVKRPVQ---DMSEDEQLQAAMKASLQD 313
BLAST of NO08G02880 vs. NCBI_GenBank
Match: CCI43060.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 120.9 bits (302), Expect = 1.300e-23 Identity = 103/367 (28.07%), Postives = 156/367 (42.51%), Query Frame = 0 Query: 1 MAAQDDGSRLRSFLAVIGDGIDPQVAQRFLDATNNDVEQAIELYLESGDGGGGAPLSSTSGDTSIADAAPDAAAISAAAQGKGDSRYRDEEEYEVDEDGNPVRKADQVKKQRLLAVSPXXXXXXXXXXXXXXXXXXXGYLPVNPFRHFGAEARGAFGRGGNPWDVAGGGEGISK-------LFQPPLQLLFHGSFADARATAKEKKKWLLVNIQREDIFESHMLNRDVWADELVHAMILEGFIFWQMSAGLPEAMSYLARYHLEXXXXXXXXXXXXXXXXGHLPHIGVLDPRTQRLMWWHTGALPPHQLADKLTEITSTYSLDDHTSVLPPPRPPPARHSTQSEYDRSEDEQLALALAASMKDAEPS 361 M+ Q L SF+ + G D A ++L+ TN ++E+++ LY+ESG G A T+ A++ + I+ + VR D K+QRL+ N FR F AE+ A A GE S+ LF+PP +L F GS+A+AR AK KWLLVNIQ E +F SHMLNRD W+D++V ++ GFIFWQ A Y ++ LP IG++ PRT ++ G + P L +K+++ L+ + + ++ D +ED LA A+AAS+++ S Sbjct: 1 MSQQLSADALPSFMNI--TGTDTATATQYLELTNWNLEESVNLYMESGAEDGHA----TTMQQDTANSPHSGSNIN-----------------------DDVRAPDPSKRQRLVGADLNFEAPQRRSQ--------------NRFRDFAAESVAAAISSDGMISSAFQGEASSQSSQNLNALFKPPSELTFDGSYAEARQAAKSAAKWLLVNIQDEIVFASHMLNRDTWSDDVVQNLVASGFIFWQSFWASESGKKVCALYQIDRDC---------------LPFIGIIHPRTGEILAQWNGFVEPTILVEKISDFCCQNILE---NTVEKETINLVEEESRESLDENEDPNLAAAIAASLEEKSKS 306 The following BLAST results are available for this feature:
BLAST of NO08G02880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02880 ID=NO08G02880|Name=NO08G02880|organism=Nannochloropsis oceanica|type=gene|length=1978bpback to top protein sequence of NO08G02880.1 >NO08G02880.1-protein ID=NO08G02880.1-protein|Name=NO08G02880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=579bpback to top Synonyms
Publications
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