NO08G02850, NO08G02850 (gene) Nannochloropsis oceanica

Overview
NameNO08G02850
Unique NameNO08G02850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1158
Alignment locationchr8:797836..798993 -

Link to JBrowse

Properties
Property NameValue
DescriptionGlycosyl hydrolase family 43, five-bladed beta-propellor domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:797836..798993 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023296Glyco_hydro_beta-prop
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
BLAST of NO08G02850 vs. NCBI_GenBank
Match: EWM26647.1 (Glycosyl hydrolase family 43, five-bladed beta-propellor domain protein [Nannochloropsis gaditana])

HSP 1 Score: 628.2 bits (1619), Expect = 1.600e-176
Identity = 293/373 (78.55%), Postives = 324/373 (86.86%), Query Frame = 0
Query:   17 LLQHRQINAFPFGGGLNVGKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGPSSS----NSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTPGVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPDGKPVFVGAGKGTGRWDAQALGCPSVSVRDGCFYMYYVGFAESTSEGAALGCIGLAISEGMDFTKWKRMGE 386
            LL  + I+AFP G   +VGKILGPG  GAWDDYKVSGP+VRQ+  G+WNMWYYGRSK FN+TA+LINLPSGHIGL++SKDGL DFARVKG LLDGAVFGPSS+     +FDSLHVGIGD+ W+   ++WVMYYFGGDGEYGPTPYGQARGIYMKIGKAES DGV W+R PGVLLDKGA G+FDALFVGWPQVVD  K  V+PG K GMFYHTFN  TFGFEIGLATS+D+ G KW KRGP+ LPRG PG+  DLGHATRCVI DP  RKKLLMFAECANTQNSNCIAVYGS+DG+ WE+MHP G PVFVGAGKG+GRWDAQALGCPSV+VRDGCFYMYYVGF ES+SEGAALGCIGLA+S+GMDFTKWKRMGE
Sbjct:   40 LLFIQTIHAFPVGRP-DVGKILGPGVGGAWDDYKVSGPVVRQSRDGSWNMWYYGRSKEFNKTANLINLPSGHIGLSQSKDGLTDFARVKGPLLDGAVFGPSSNEAGGKAFDSLHVGIGDIVWEEARQQWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESPDGVQWSRAPGVLLDKGAAGDFDALFVGWPQVVDFGKADVIPGMKQGMFYHTFNAVTFGFEIGLATSSDTTGNKWIKRGPIHLPRGAPGSYCDLGHATRCVIPDPANRKKLLMFAECANTQNSNCIAVYGSNDGLLWENMHPAG-PVFVGAGKGSGRWDAQALGCPSVTVRDGCFYMYYVGFTESSSEGAALGCIGLAVSDGMDFTKWKRMGE 410          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_015224680.1 (hypothetical protein [Halothece sp. PCC 7418] >AFZ42802.1 hypothetical protein PCC7418_0574 [Halothece sp. PCC 7418])

HSP 1 Score: 246.1 bits (627), Expect = 1.700e-61
Identity = 156/361 (43.21%), Postives = 201/361 (55.68%), Query Frame = 0
Query:   34 VGKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTP----GVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPD--GKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAESTS-EGAALGCIGLAISEGMDFTKWKRMGE 386
            +G IL PG  G WD  +VS P V +   G W MWYYGR   F++    INLP+G  GLA S DG+  + RV G L  G+VF P    N FDS HVG+ DV     L  + ++YFGGD ++ P    +A+GI M+ G A S DG++W R      G LL  G  G FD LF G+PQV+  E D         M+YHT N    GF +GLA S D  G +W K G + L  G PG   + G  TR V+  P+   + +MF E  N  + +CI +  S DG HWE    D  G  VF  A  G+GRWDA+A+G P  V + DG +Y+YY+G  E  S E  +   IGLA+S+G D+ KWKR GE
Sbjct:    8 LGLILKPGAPGWWDSERVSSPCVLRCSDGKWRMWYYGRDPEFDRE---INLPTGRCGLAISDDGIH-WERVSGPLTMGSVFEPHPDPNRFDSAHVGVSDVTVRDGL--YWLWYFGGDHDFTPVGNMKAKGIRMQPGCAVSGDGLNWIRLEGPDRGALLPTGESGAFDELFCGFPQVL-REND-----GSWKMYYHTLNPEK-GFLVGLAVSED--GLQWEKVGEV-LGSGSPGRFDERGVGTRHVL--PI-GNEYVMFYEGVNNSSYHCIGIATSSDGYHWEKQDGDEIGGSVFAHAPSGSGRWDARAVGTPCVVPLADGSWYLYYIGANEGGSDELTSQHQIGLAVSDGTDYGKWKRWGE 349          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_006102408.1 (hypothetical protein [Coleofasciculus chthonoplastes] >EDX74103.1 Glycosyl hydrolases family 32 [Coleofasciculus chthonoplastes PCC 7420])

HSP 1 Score: 244.2 bits (622), Expect = 6.600e-61
Identity = 156/361 (43.21%), Postives = 206/361 (57.06%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQ-WDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTP----GVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDM--HPDGKPVFVGAGKGTGRWDAQALGCP-SVSVRDGCFYMYYVGFAE-STSEGAALGCIGLAISEGMDFTKWKRMGE 386
            G IL PG+ G WD  +VS P V + P GTW MWYYGR  +F++    INLP+G  GLA S DG+  + RVKG L  GAVF P      FDS H+G+ DV  WD     + M+YFGGD +       +A+G+ M  G A S DG++W R      G  L+ G PGEFDALF GWPQV+  E D      +  M+YHT  ++   F +GLA S D  G +W K G +  P G PG+  + G  TR V++        +MF E  NT   + I +  S+DG+ WE    +  G  VF  A KG+GRWDA+A+G P  VS+ DG F MYY+G  E    E ++   IGLA+S+G +F +W+R GE
Sbjct:   13 GLILTPGSEGWWDSERVSCPRVMRCPDGTWKMWYYGRDASFDRQ---INLPTGRCGLAVSSDGIH-WERVKGPLTMGAVFEPHPDPQRFDSAHLGVSDVNFWDG---LYWMWYFGGDHQVLDMGKFKAKGLQMLPGCAISRDGINWVRLEGFYRGAFLECGQPGEFDALFCGWPQVL-REHD------RWKMYYHTL-SSNREFLVGLAMSTD--GFRWEKVGQILGP-GEPGSFDERGIGTRHVLN---INGDYVMFYEGVNTSGYHSIGLAISEDGITWEKQKGYKAGGAVFSHAPKGSGRWDARAVGTPWVVSMEDGSFRMYYIGANEGGHDELSSQHQIGLAVSQGKNFDQWQRWGE 352          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_104910059.1 (glycosyl hydrolase [Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont'] >AVH73601.1 family 32 glycosylhydrolase [Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont'])

HSP 1 Score: 242.7 bits (618), Expect = 1.900e-60
Identity = 151/360 (41.94%), Postives = 200/360 (55.56%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRT----PGVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPD--GKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAE-STSEGAALGCIGLAISEGMDFTKWKRMGE 386
            G +  PG  G WD  +VS P V   P GTW MWYYGR  +F++    INLP+G  GLA S DG+ D+ RV+GLL  GA+F P  +S+ FDS HVG+ +V +   L  + M+YFGGD         +A+G+ M+ G A S DG++W R      G  LD G  GEFDALF GWPQV+  +  +        M+YHT N    GF +GLA S D  G  W K G +  P G  G+  + G  TR V+       + +MF E  N    + I +  S DG+HW+       G  +F  A KG+GRWDA+A+G P  V++ DG F MYY+G  E    E ++   IGLA+S G DF +W R GE
Sbjct:   12 GLVFMPGAEGWWDSERVSSPQVLYCPDGTWKMWYYGRDASFDRQ---INLPTGRCGLAISADGI-DWQRVQGLLTMGAIFEPHQNSSRFDSAHVGVSNVYFHDGL--YWMWYFGGDHTVVDRGGFKAKGLNMRPGCAISRDGINWVRLEGTYQGAFLDVGKAGEFDALFCGWPQVLPDDDGT------WKMYYHTLNPDR-GFLVGLAVSCD--GFHWEKVGQILAP-GESGSFDERGIGTRHVLK---INGQYIMFYEGVNNNGYHSIGLAVSGDGIHWQKHQGQQVGGSIFSHAQKGSGRWDARAVGTPCVVAMDDGSFRMYYIGANEGGHDELSSQHQIGLAVSAGTDFRQWHRWGE 352          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: CEJ47114.1 (Putative extracellular nuclease (Putative lipopro tein) [Chrysosporum ovalisporum])

HSP 1 Score: 242.3 bits (617), Expect = 2.500e-60
Identity = 151/358 (42.18%), Postives = 198/358 (55.31%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRT----PGVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPDGKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAESTSEGAAL-GCIGLAISEGMDFTKWKRMGE 386
            G IL PGT G WD  +VS P V   P GTW MWYYGR  +F+Q    INLP+G  GLA S DG+ ++ R+KG L  G+V  P   ++ FDS HVG+ +V +D  L  + M+YFGG+          A+G+ M+ G A S DG++W R      G +LD G  GEFDALF  WPQV       +  G    ++YHT N    GF +GLA S D  G  W K G +  P G  G+  + G  TR V+      K+ LMF E  N    + I +  SDDG+HW+       P+F  A KG+G WDA+A+G P  V + DG F MYY+G  E   +  +L   IGLA+S G +F +W R GE
Sbjct:   12 GLILAPGTEGWWDSERVSAPQVMHCPDGTWKMWYYGRDASFDQQ---INLPTGRCGLAISPDGV-NWQRLKGPLTMGSVLEPHPDAHRFDSAHVGVSNVNFDDNL--YWMWYFGGNHTIVDIGKFSAKGLKMRPGCAISRDGINWVRLEGAYQGAILDVGQAGEFDALFCAWPQV-------LRDGQSWKLYYHTLNPEK-GFLVGLAVSTD--GLHWEKVGQILGP-GESGSFDERGIGTRHVLK---INKQYLMFYEGVNNSGYHSIGLAISDDGIHWQ--KDTDVPIFSHAEKGSGYWDARAVGTPCVVPMDDGSFRMYYIGANEGGHDELSLQHQIGLAVSAGANFRQWYRWGE 347          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: ESQ16309.1 (hypothetical protein N838_06220 [uncultured Thiohalocapsa sp. PB-PSB1])

HSP 1 Score: 240.7 bits (613), Expect = 7.300e-60
Identity = 148/363 (40.77%), Postives = 202/363 (55.65%), Query Frame = 0
Query:   33 NVGKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGPSSSNS-FDSLHVGIGDVQ-WDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTP----GVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDM--HPDGKPVFVGAGKGTGRWDAQALGCP-SVSVRDGCFYMYYVGFAES----TSEGAALGCIGLAISEGMDFTKWKR 383
            ++G +  PG  GAWDD +VSGP VR  P GTW MWYYGR ++F++    INLP+G +GLA+S DGL  + RV G L  GAVF P +  + FDS HVG+GDV   D   + W   YFGGD         +A+G+ ++IG A S+DGV W R      G LLD GAPG FD+    WPQV+ L+        +  M+YH+ +     F +G+A SAD    +WT+RG +  P G  G    LG  TR V+     + + LMF E         I +  S+DG+ W  +  H     VF  A +G+GRWDA A+G P +V + DG + +YYVG  E+      E A    IG+A+S+G +  +W R
Sbjct:    7 HLGLMFPPGPPGAWDDERVSGPRVRSLPDGTWRMWYYGRDRSFDRE---INLPTGRVGLARSNDGLH-WQRVLGPLTGGAVFEPHADPARFDSAHVGVGDVTLTDGTYRLW---YFGGDHTRQRFGRFEAKGLQLRIGCALSTDGVHWQRQDGAHRGALLDLGAPGTFDSATCAWPQVLALD------DGRWRMYYHSLDAKRMLFVVGVAESADQL--EWTRRGEVFGP-GEAGAFDALGVGTRHVLR---HQGRWLMFYEGVRADGYRSIGLAESEDGLRWTRIPGHESDGSVFAHAPRGSGRWDAFAVGTPCAVPMSDGSWRLYYVGANETPGGYADELAMRHQIGVAVSDGANLMRWIR 350          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_071516745.1 (glycosyl hydrolase [Geitlerinema sp. PCC 9228])

HSP 1 Score: 238.8 bits (608), Expect = 2.800e-59
Identity = 150/360 (41.67%), Postives = 199/360 (55.28%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTP----GVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPD--GKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAE-STSEGAALGCIGLAISEGMDFTKWKRMGE 386
            G ILGPG +  WD  +VS P V +   G W MWYYGR + F++    INLP+GH G+A S+DG+  + RV+G L  GAVF P    N FDS HVG+ DV++      + M+YFGGD  +      +A+G+ M+ G A S DG+ W R      G  L  G  G+FD LF G+PQV+  E D         ++YHT +    GF +GLA S D  G  W K G +  P G  G   + G  TR V+  P+   + +MF E  N    +CI +  S DG HW+    D  G  VF  A  G+GRWDA+A+G P  V + +G +YMYY+G  E  T E      IGLA+S+G +F KWKR GE
Sbjct:   13 GLILGPGPSQWWDSERVSCPRVLRCSDGMWRMWYYGRDRNFDRD---INLPTGHCGMAISEDGIH-WQRVQGPLTMGAVFEPHPDPNRFDSAHVGVSDVRYSDGY--YWMWYFGGDNNFTQVGNMRAKGVRMQPGCAISGDGLHWVRLEGPHRGAFLPVGESGDFDELFCGFPQVL-REND-----GSWKLYYHTLHPEK-GFLVGLAVSKD--GLHWEKVGQVLGP-GAAGRFDERGAGTRYVL--PI-DNQYVMFYEGVNNSGYHCIGIATSTDGQHWQKQDGDEVGGAVFAHAQPGSGRWDARAVGTPCVVPLENGGWYMYYIGANEGGTDELTTQHQIGLAVSDGNNFAKWKRWGE 353          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_085435938.1 (glycosyl hydrolase [unicellular cyanobacterium SU2])

HSP 1 Score: 238.8 bits (608), Expect = 2.800e-59
Identity = 153/360 (42.50%), Postives = 195/360 (54.17%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTP----GVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDM--HPDGKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAE-STSEGAALGCIGLAISEGMDFTKWKRMGE 386
            G IL PG  G WD  +VS P V   P GTW MWYYGR   F++    INLP+G  GLA S DG+ ++ RV G L  G+V  P    N FDS H+G+ DV +   L  + M+YFGGD +   T    A+GI M  G A S DG++W R      G  LD G PGEFDALF GWPQV+              M+YHT N  T GF +GLA S D  G  W K G +  P G   +  + G  TR V+    +  + +MF E  NT + + I V  SDDG+ W     +  G  +F  A KG+ RWDA+A+G P  V + DG F MYY+G  E    E ++   IGLA+S G +F +W R GE
Sbjct:   13 GLILTPGPQGWWDCERVSSPCVINCPDGTWKMWYYGRDPNFDRE---INLPTGRCGLAISSDGV-NWERVNGPLTMGSVLEPHQDPNRFDSSHIGVSDVYYREGL--YWMWYFGGDQKVINTGNFAAKGISMLPGCAISYDGINWIRLEGPYRGAFLDCGQPGEFDALFCGWPQVLH-------ENGTWKMYYHTLN-PTLGFLVGLAVSTD--GLHWEKMGQILGP-GEANSFDERGVGTRHVLK---KDNQYIMFYEGVNTSSYHSIGVAISDDGIKWNKQPGNEIGGAIFSHAPKGSDRWDARAVGTPCVVPMNDGSFRMYYIGANEGGHDELSSQHKIGLAVSNGANFMEWHRWGE 352          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_019497328.1 (glycosyhydrolase [Calothrix sp. PCC 7103])

HSP 1 Score: 236.9 bits (603), Expect = 1.100e-58
Identity = 154/360 (42.78%), Postives = 195/360 (54.17%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGPSSSNS-FDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRTP----GVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPD--GKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAE-STSEGAALGCIGLAISEGMDFTKWKRMGE 386
            G I  PG  G WD  +VS P V +   GTW MWYYGR  +F++    INLP+G  GLA S DG+  + RVKG +  GAV  PS   S FDS H+G+  V++   L  + M+YFGGD         +A+GI M+ G A S DG++W R      G  LD G   EFD LF GWPQV  L  D         M+YHTFN    GF +GLA S D  G  W K G +  P G  G+  + G  TR V+    R    +MF E AN  + +CI V  S+DG+ W     +  G PVF  A  G+ RWDA+A+G P  V + DG F MYY+G  E    E +    IGLA+S+G +F KW R GE
Sbjct:   11 GLIFTPGPQGWWDSERVSCPRVIRCADGTWKMWYYGRDASFDRQ---INLPTGRCGLAISADGI-SWERVKGFMTMGAVLEPSPDPSRFDSAHIGVSSVEYSDGL--YWMWYFGGDQTVQEVGKFKAKGIQMRPGCAISRDGINWVRLEGAYRGAFLDIGKTPEFDCLFCGWPQV--LRDDD----GTWKMYYHTFN-PELGFLVGLAVSTD--GFNWEKVGQILGP-GELGSFDERGIGTRHVLKVSSR---YVMFYEGANNSSYHCIGVATSNDGIKWSKYEGEQPGGPVFRHAPSGSLRWDARAVGTPCVVPMNDGSFRMYYIGANEGGYDELSTQHQIGLAVSDGSNFYKWYRWGE 351          
BLAST of NO08G02850 vs. NCBI_GenBank
Match: WP_089093311.1 (glycosyl hydrolase [Nodularia sp. NIES-3585] >GAX38226.1 hypothetical protein NIES3585_42740 [Nodularia sp. NIES-3585])

HSP 1 Score: 235.0 bits (598), Expect = 4.000e-58
Identity = 149/358 (41.62%), Postives = 196/358 (54.75%), Query Frame = 0
Query:   35 GKILGPGTAGAWDDYKVSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRDFARVKGLLLDGAVFGP-SSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDGEYGPTPYGQARGIYMKIGKAESSDGVSWTRT----PGVLLDKGAPGEFDALFVGWPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKRGPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAVYGSDDGMHWEDMHPDGKPVFVGAGKGTGRWDAQALGCPS-VSVRDGCFYMYYVGFAE-STSEGAALGCIGLAISEGMDFTKWKRMGE 386
            G +L PGT G WD  +VS P V + P GTW MWYYGR  AF++    INLP+G  GLA S DG+ ++ RVKG L  G+VF P   +N FDS HVG+ +V +   L  + M+YFGG+          A+G+ M+ G A S DG++W R      G +LD G  GEFD LF  WPQV+              ++YHT N    GF +GLA S D  G  W K G + L  G  G+  + G  TR V+       + LMF E  N    + I +  SDDG+HW+       P+F  A KG+G WDA+A+G P  V + DG F MYY+G  E    E ++   IGLA+S G +F +W R GE
Sbjct:   12 GLVLAPGTEGWWDSERVSAPQVIRCPDGTWKMWYYGRDAAFDRQ---INLPTGRCGLAISPDGV-NWQRVKGQLTMGSVFEPHPDTNRFDSAHVGVSNVNFYDGL--YWMWYFGGNHTVVDIGKFSAKGLQMRPGCAISRDGINWVRLEGAYQGAILDVGKKGEFDTLFCAWPQVLH-------DHGTWKLYYHTLNPEK-GFLVGLAVSTD--GLHWEKVGQI-LGAGESGSFDERGIGTRHVLK---INGEYLMFYEGVNNSGYHSIGLAISDDGIHWQ--KDTDIPIFSHAEKGSGYWDARAVGTPCVVPMDDGSFRMYYIGANEGGHDELSSQHQIGLAVSAGTNFRQWHRWGE 347          
The following BLAST results are available for this feature:
BLAST of NO08G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26647.11.600e-17678.55Glycosyl hydrolase family 43, five-bladed beta-pro... [more]
WP_015224680.11.700e-6143.21hypothetical protein [Halothece sp. PCC 7418] >AFZ... [more]
WP_006102408.16.600e-6143.21hypothetical protein [Coleofasciculus chthonoplast... [more]
WP_104910059.11.900e-6041.94glycosyl hydrolase [Nostoc sp. 'Lobaria pulmonaria... [more]
CEJ47114.12.500e-6042.18Putative extracellular nuclease (Putative lipopro ... [more]
ESQ16309.17.300e-6040.77hypothetical protein N838_06220 [uncultured Thioha... [more]
WP_071516745.12.800e-5941.67glycosyl hydrolase [Geitlerinema sp. PCC 9228][more]
WP_085435938.12.800e-5942.50glycosyl hydrolase [unicellular cyanobacterium SU2... [more]
WP_019497328.11.100e-5842.78glycosyhydrolase [Calothrix sp. PCC 7103][more]
WP_089093311.14.000e-5841.62glycosyl hydrolase [Nodularia sp. NIES-3585] >GAX3... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL108nonsL108Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR140ngnoR140Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008735NSK008735Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02850.1NO08G02850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02850.1NO08G02850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02850 ID=NO08G02850|Name=NO08G02850|organism=Nannochloropsis oceanica|type=gene|length=1158bp
ATGCAAAGCCCACCCTCGCTTCTCCTCCTCCCTCTCCTCCTTATCCCTCT
CCTCCAACACCGCCAGATCAACGCCTTCCCCTTTGGCGGTGGACTGAACG
TGGGCAAGATTCTGGGACCCGGCACAGCTGGAGCATGGGATGACTACAAG
GTGTCGGGTCCCATTGTGCGGCAAGCGCCGGCCGGTACCTGGAATATGTG
GTACTATGGCCGATCGAAAGCCTTCAACCAAACCGCCGACCTGATCAACC
TCCCCTCGGGACACATTGGCTTGGCGAAATCCAAGGATGGCTTGCGTGAT
TTCGCGCGGGTCAAAGGTCTCCTGTTAGATGGAGCTGTATTTGGTCCTAG
CAGCAGCAATAGCTTCGATTCTCTGCACGTAGGCATCGGAGACGTCCAAT
GGGACGCGCAGTTGAAGAAATGGGTCATGTACTACTTCGGTGGCGACGGC
GAGTATGGCCCTACTCCCTACGGACAAGCCCGAGGGATCTACATGAAAAT
CGGTAAGGCCGAAAGCTCCGACGGTGTGAGCTGGACACGGACCCCCGGTG
TGCTCCTTGATAAAGGCGCGCCTGGTGAGTTCGATGCCCTCTTCGTCGGT
TGGCCTCAAGTCGTGGATCTGGAGAAAGACAGTGTCCTACCGGGTGCAAA
GCTCGGTATGTTTTATCATACCTTTAATACAGCAACCTTCGGATTTGAAA
TCGGGCTTGCCACGTCCGCCGACTCCAAGGGTGAGAAATGGACTAAGCGT
GGCCCTCTTCAATTACCCCGAGGGCCTCCCGGCACGCTACGCGATTTGGG
ACATGCCACCCGCTGTGTTATTTCTGACCCGGTTAGGAGAAAGAAATTAC
TGATGTTTGCGGAGTGTGCGAATACGCAGAACAGTAATTGTATTGCTGTG
TATGGTTCGGATGATGGTATGCATTGGGAAGACATGCACCCAGATGGCAA
GCCTGTCTTTGTCGGGGCTGGGAAAGGGACAGGGAGGTGGGATGCTCAGG
CGTTGGGTTGTCCGAGTGTAAGTGTGAGAGATGGATGTTTTTATATGTAT
TATGTGGGCTTTGCTGAGAGTACTTCGGAGGGTGCAGCGCTTGGGTGCAT
TGGCTTGGCGATCAGTGAGGGGATGGACTTTACAAAGTGGAAGAGGATGG
GAGAGTAG
back to top

protein sequence of NO08G02850.1

>NO08G02850.1-protein ID=NO08G02850.1-protein|Name=NO08G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=386bp
MQSPPSLLLLPLLLIPLLQHRQINAFPFGGGLNVGKILGPGTAGAWDDYK
VSGPIVRQAPAGTWNMWYYGRSKAFNQTADLINLPSGHIGLAKSKDGLRD
FARVKGLLLDGAVFGPSSSNSFDSLHVGIGDVQWDAQLKKWVMYYFGGDG
EYGPTPYGQARGIYMKIGKAESSDGVSWTRTPGVLLDKGAPGEFDALFVG
WPQVVDLEKDSVLPGAKLGMFYHTFNTATFGFEIGLATSADSKGEKWTKR
GPLQLPRGPPGTLRDLGHATRCVISDPVRRKKLLMFAECANTQNSNCIAV
YGSDDGMHWEDMHPDGKPVFVGAGKGTGRWDAQALGCPSVSVRDGCFYMY
YVGFAESTSEGAALGCIGLAISEGMDFTKWKRMGE*
back to top
Synonyms
Publications