NO08G02780, NO08G02780 (gene) Nannochloropsis oceanica

Overview
NameNO08G02780
Unique NameNO08G02780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1711
Alignment locationchr8:782362..784072 +

Link to JBrowse

Properties
Property NameValue
DescriptionAmidohydrolase 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:782362..784072 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR032466Metal_Hydrolase
IPR006680Amidohydro_1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G02780 vs. NCBI_GenBank
Match: XP_009035939.1 (hypothetical protein AURANDRAFT_59989 [Aureococcus anophagefferens] >EGB09913.1 hypothetical protein AURANDRAFT_59989 [Aureococcus anophagefferens])

HSP 1 Score: 131.3 bits (329), Expect = 6.300e-27
Identity = 116/366 (31.69%), Postives = 163/366 (44.54%), Query Frame = 0
Query:   33 PLPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFLNYEQDCG-VGVAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVGAEGVKNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNY----SSDDPSLTWPQVERGDFLTGGVP--SFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGCLK--LGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLL---GGDAQPTTLEALVLAQHALVSDLPEEQTLQ--LFSETAKKVYKL 385
            P  IVD H H  +     N   G L     P Y+   Y  DCG + ++ +VH+EA+       A  ++ +A+      KV A       +VA   LSA P+A AV+D      A +  GVR IL+Y      D+ +     +   D+L    P  +F+ GFA LA RGLSFDLQ    QL  AA      P+  V++DH+G  +    A D  DAK I  W+ GM  +AA P V VKLSML +   GW   +                                    +VK+ V+E ++ FG +RCMFASN+ ++  +    G D+   T+  L     A V D   +   Q  LF+ TA   Y+L
Sbjct:    9 PADIVDCHHHFIEPQN--NAFQGFLKSLGAPNYTCEQYASDCGALPISKTVHVEAMPDDGVAEAAWVESLADR----HKVAA-------VVAKCDLSA-PDAAAVLDG-LAACAPKLRGVRFILDYDGPFGEDNATHVQCSLHGLDYLRDPEPAAAFERGFASLAARGLSFDLQCCPAQLPAAAALCAKHPDVAVVIDHLGKPRHLSQARDPFDAKAIDAWRRGMALMAAQPQVCVKLSMLGFAVPGWTEHD--------------------------------GKRALVKSLVKETVDLFGPDRCMFASNWHINGAVSNSDGADSCEVTMPELYATFQAWVDDWGLDAAAQRALFAGTAATFYRL 327          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: WP_016747643.1 (amidohydrolase [Sphingomonas wittichii])

HSP 1 Score: 131.3 bits (329), Expect = 6.300e-27
Identity = 110/358 (30.73%), Postives = 150/358 (41.90%), Query Frame = 0
Query:   32 PPLPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFLNYEQDCGVG--VAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVGAEGVKNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGCLKLGAGDE--EDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQ-HKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P LPIVDPH H+WD      P  G         Y       D G G  +  +V IE          ++L PV ET F L            IV    L        +++AH      RF G+R   N+  D     WP+      L    P F+ GFA LAP GLSFD  +   Q+ + A    AFP+T +I+DH+G L LG G+     A+  A+W++G+  LA  PN  VK+  L    +G   H     AT +    E+ AA   V                     V   +E FG++RCMF SNFPVD    G          L  A   + +    ++   LF+ TA++ Y+L
Sbjct:   14 PDLPIVDPHHHLWDGIPALGPRGGRR-------YHTPELLADLGSGHRIVQTVAIECGAHYFDDGPESLRPVGETLFFLGSAKGAAGLCAGIVGHADLQPGDAVAPLLEAHVDAGKGRFRGIRQSANWDGDPLFDNWPRRPPPGLLAD--PGFRAGFARLAPLGLSFDAWIFHPQIGELADLAAAFPDTAIILDHVGGL-LGIGNHGARPAETFALWRDGLARLAERPNALVKIGGLGMPFAGSPLHMREPPATVD----ELVAAWRPV---------------------VETCVELFGADRCMFESNFPVDSATCG-------YVRLWNAFKRISAGWSADERAALFAGTARRAYRL 329          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: OYU70687.1 (amidohydrolase [Alphaproteobacteria bacterium PA2])

HSP 1 Score: 131.3 bits (329), Expect = 6.300e-27
Identity = 118/374 (31.55%), Postives = 171/374 (45.72%), Query Frame = 0
Query:   28 PTTLPPLPIVDPHFHIWD-----ANTLPNPNLG-ELTMKALPVY--SFLNYEQDCGVGVAGSVHIE-AVVGQAKGAAKALDPVAETRFV--LEKVGAEGVKN-----VNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGC-LKLGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P   P LPI+DPH H+WD        LP P  G E  ++  P Y    L  +  CG  V G+V++E   + +A G A+ L PV ET FV  +  V A G          IV    L        V++AH      RF G+R   + +  DP +  P    G  L      F++GFA LAP  LSFD  +   QL D  +  +AFP+T +++DH+G  L +GA   +  +R  +W++ ++ LA  P V VKL  L  +  G+                        +  +S+  +S+       +  +   IE FG ERCMF SNFPVD   LG      T + L  A   L     +++   LF+ TA++VY+L
Sbjct:    7 PILEPDLPIIDPHHHLWDRPASAIAALPPPKHGFEHIIRMSPRYMTEELVADMQCGHKVIGTVYMECGSMYRADGPAE-LKPVGETEFVNGVAAVTASGRFGDIRACAGIVGHADLKLGAPVARVLEAHIAAGGGRFRGIRQSAS-ADADPDVLGPLHRMGPGLYLS-DDFRKGFAQLAPLNLSFDAWMLEPQLPDLISLARAFPDTDIVLDHVGTPLGIGAYAGKRDERFGIWRDNIRELAKSPKVNVKLGGLAMVFPGF------------------------DSFMSDPPTSSEGLAAEWRPYIETCIEAFGPERCMFESNFPVD---LGS----CTYDVLWNAFKVLARGAGDDEKAALFAGTARRVYRL 346          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: WP_095011114.1 (amidohydrolase [Altererythrobacter mangrovi])

HSP 1 Score: 130.6 bits (327), Expect = 1.100e-26
Identity = 115/371 (31.00%), Postives = 166/371 (44.74%), Query Frame = 0
Query:   32 PPLPIVDPHFHIWDANTLP-------NPNLGELTMKALPVYSFLNYEQDCGVGVAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVGAEGVKNV--------NIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWP-QVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGC-LKLGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKLK 386
            P LPI+DPH H+WD   L        +P +  L   A   +  L  +   G  V G+V +E           AL PV E  FV   V A+G   +        +IV    L+   +A  V+DA    A++RFVG+R    + +D  +L  P     G +L      F+EGFA L  RGL+FD  V   QL D     +AFPE  +++DH G  L +G  +    +  A W+  ++AL   PNV VKL               G+A A  M  E   A      +++E          + +  +   IE FG  R MF SN+PVD+    G + P    AL  A   + +   +E+  QL++ TA KVY+L+
Sbjct:    8 PDLPIIDPHHHLWDLRPLVGAFPEPLHPFVAALVDAAYYTFDALYADTHSGHNVIGTVFMECGAFYDSSRGDALKPVGEVEFV-NGVAAQGASGLYGDYRPCASIVGHADLTLGAKAGEVLDA-LQAASQRFVGIRHAAAWDADPATLGPPFHHPEGLYLDA---KFREGFAELGKRGLTFDAWVLEPQLGDVLDLARAFPEQTIVLDHCGTPLNIGPYNGTLGEHFARWRNSIQALGECPNVSVKLG--------------GLAMAFCMMPEEGPAAGIGSGKLAE----------MWRPYIETCIEAFGPARAMFESNYPVDR---WGASYP----ALWNAFKRITTGASDEEKHQLYAGTAAKVYRLE 342          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: WP_030092658.1 (amidohydrolase [Sphingomonas sp. DC-6] >ARR54671.1 amidohydrolase [Sphingomonas sp. DC-6])

HSP 1 Score: 130.2 bits (326), Expect = 1.400e-26
Identity = 111/358 (31.01%), Postives = 152/358 (42.46%), Query Frame = 0
Query:   32 PPLPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFLNYEQDCGVG--VAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVGAEGVKNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGCLKLGAGDE--EDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQ-HKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P LPIVDPH H+WD      P LG    +       L    D G G  +  +V IE          ++L PV ET F L            IV    L        +++AH      RF G+R   N+  D     WP+      L    P F+ GFA LAP GLSFD  +   Q+ + A    AFP+T +I+DH+G L LG G+     A+  A+W++G+  LA  PN  VK+  L    +G   H     AT +    E+ AA   V                     V   +E FG++RCMF SNFPVD    G          L  A   + +    ++   LF+ TA++ Y+L
Sbjct:   14 PDLPIVDPHHHLWDG----IPALGARGGRRYHTPELL---ADLGSGHRIVQTVAIECGAHYFDDGPESLRPVGETLFFLGSAKGTAGLCAGIVGHADLQPGDAVAPLLEAHVDAGKGRFRGIRQSANWDGDPLFDNWPRRPPPGLLAD--PGFRAGFARLAPLGLSFDAWIFHPQIGELADLATAFPDTAIILDHVGGL-LGIGNHGARPAETFALWRDGLARLAERPNALVKIGGLGMPFAGSPLHMREPPATVD----ELVAAWRPV---------------------VETCVELFGADRCMFESNFPVDSATCG-------YVRLWNAFKRISAGWSADERAALFAGTARRAYRL 329          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: WP_056358528.1 (MULTISPECIES: amidohydrolase [Sphingomonas] >KQX17464.1 amidohydrolase [Sphingomonas sp. Root1294] >KQY70390.1 amidohydrolase [Sphingomonas sp. Root50] >KRB92123.1 amidohydrolase [Sphingomonas sp. Root720])

HSP 1 Score: 130.2 bits (326), Expect = 1.400e-26
Identity = 108/359 (30.08%), Postives = 150/359 (41.78%), Query Frame = 0
Query:   32 PPLPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFLNYEQDCGVG--VAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKV-GAEGVKNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHM-GCLKLGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSML--EYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P L IVDPH H+WD      P  G         Y   +   D G G  +  +V IE      +    +L PV ET F L    GA       IV    L        V++AH      RF G+R   N+  D     WP+      L      F+ GFA LAP GLSFD  +   Q+ + A    AFP+T +I+DH+ G L +G      A+  A W++GM  LAA PN  VK+  L   +  S    +E   + AE++ +                           +  V   +E FG+ERCMF SNFPV       D+   +   L  A   + +    ++   LFS TA++ Y+L
Sbjct:   14 PGLAIVDPHHHLWDGIAALGPKGGRF-------YHAPDLLADLGAGHRIVQTVAIECHAHYREDGPASLRPVGETAFFLASAEGASPGLCAGIVGHADLRLGDAVTPVLEAHAAAGNGRFRGIRHSANWDGDPVFEAWPRRPSPGLLAD--TGFRAGFARLAPLGLSFDAWIFHPQIGELANLAAAFPDTAIILDHVGGLLGIGGHGTRPAETFAAWRDGMGKLAARPNALVKIGGLGMPFGGSPLHMREPPASVAELVEA--------------------------WRPVVETCVELFGAERCMFESNFPV-------DSATCSYVRLWNAFKRISARWSTDERTALFSGTARRAYRL 330          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: OJU55937.1 (amidohydrolase [Alphaproteobacteria bacterium 62-8])

HSP 1 Score: 130.2 bits (326), Expect = 1.400e-26
Identity = 116/374 (31.02%), Postives = 162/374 (43.32%), Query Frame = 0
Query:   32 PPLPIVDPHFHIWDANT----LPNPNLGEL-TMKALPVYSF--LNYEQDCGVGVAGSVHIEAVVGQAKGAAKALDPVAETRFV--LEKVGAEGVKN-----VNIVAFVKL-SAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWP---QVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGC-LKLGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSG--WQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P LPIVDPH H+WD  T    LP    G +  ++  P Y F  L  +   G  V G+V++E          + L  V ET FV  +  + A G+         IV  V L       + V+ +H      RF G+R    Y +D P++  P   +V  G +  G   SF+EGFA+L   GLSFD  +   QL D     +AFP+T ++ DH+G  L +GA      +R A W+E ++ LA   NV VKL  L     G  W +K    ++AE+                              K  +   IE FG+ R MF SNFPV       D+       L  A     S    ++ + LFS TA +VY+L
Sbjct:   12 PDLPIVDPHHHLWDRRTGVKDLPASGHGFVDILRQQPCYLFPELLADLQSGHNVRGTVYMECGAMYRAAGPQPLRTVGETEFVNGVAAMSASGIYGPVRACAGIVGHVDLRQGATIVEDVLRSHIAAGHGRFRGIRHSAAYDADAPNVLGPLAGRVPEGLYRDG---SFREGFAVLHKLGLSFDAWLLEPQLPDLIDLARAFPDTTIVCDHVGTPLGIGAYKGRREERFATWRENIRTLAKCANVNVKLGGLAMPFCGFDWSYKNRPASSAELA--------------------------VAWKPYIETCIEAFGARRAMFESNFPV-------DSYSCDYATLWNALKRTASGCTADEKIALFSGTAIRVYRL 349          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: SFE13512.1 (Predicted metal-dependent hydrolase, TIM-barrel fold [Acidovorax konjaci])

HSP 1 Score: 129.8 bits (325), Expect = 1.800e-26
Identity = 113/366 (30.87%), Postives = 164/366 (44.81%), Query Frame = 0
Query:   28 PTTLPPLPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFL--NYEQDCGVG--VAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVG---AEGV-KNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHM-GCLKLGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P   P LPIVD H H +D                 P +++L  +Y  D G G  V  SVH++A+        +AL PV ET FV+   G   A G    + IV +  L      + V++AH      RF GVR +  + + DP+LT P       L G   +++EG A +A  GLSFD  + + QL +     +AFP   VIV+H  G +++GA     A+    W+  M+ LA LPNV+VKL  L    +G+  ++                         E   S+ +     +  +   IE FG++RCMF SNFPVDK   G  +  T   A      A+ +     +   LF  TA +VY+L
Sbjct:   18 PVREPALPIVDAHHHFYDR----------------PGWTYLAADYAADTGSGHDVRASVHMQALTRYLTAGPEALKPVGETEFVVAATGQGPAGGTHAALGIVGYGNLRLGDAVRPVLEAHLEAGRGRFRGVRHLTTWDA-DPTLTNPLSAVPPGLLGD-RAYREGVAHVAALGLSFDAWLFFTQLPELRDLAKAFPAMPVIVNHCGGVVRIGAYAAHRAEAFGAWRRSMRELAELPNVFVKLGGLGMRINGFGFEQ------------------------GERPPSSEHLAETWRPWMETCIEAFGADRCMFESNFPVDK---GSYSYRTLWNAF----KAMTASAAPGERRALFEGTATRVYRL 334          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: WP_092956029.1 (amidohydrolase [Acidovorax konjaci])

HSP 1 Score: 129.8 bits (325), Expect = 1.800e-26
Identity = 113/366 (30.87%), Postives = 164/366 (44.81%), Query Frame = 0
Query:   28 PTTLPPLPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFL--NYEQDCGVG--VAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVG---AEGV-KNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHM-GCLKLGAGDEEDAKRIAVWQEGMKALAALPNVYVKLSMLEYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            P   P LPIVD H H +D                 P +++L  +Y  D G G  V  SVH++A+        +AL PV ET FV+   G   A G    + IV +  L      + V++AH      RF GVR +  + + DP+LT P       L G   +++EG A +A  GLSFD  + + QL +     +AFP   VIV+H  G +++GA     A+    W+  M+ LA LPNV+VKL  L    +G+  ++                         E   S+ +     +  +   IE FG++RCMF SNFPVDK   G  +  T   A      A+ +     +   LF  TA +VY+L
Sbjct:   92 PVREPALPIVDAHHHFYDR----------------PGWTYLAADYAADTGSGHDVRASVHMQALTRYLTAGPEALKPVGETEFVVAATGQGPAGGTHAALGIVGYGNLRLGDAVRPVLEAHLEAGRGRFRGVRHLTTWDA-DPTLTNPLSAVPPGLLGD-RAYREGVAHVAALGLSFDAWLFFTQLPELRDLAKAFPAMPVIVNHCGGVVRIGAYAAHRAEAFGAWRRSMRELAELPNVFVKLGGLGMRINGFGFEQ------------------------GERPPSSEHLAETWRPWMETCIEAFGADRCMFESNFPVDK---GSYSYRTLWNAF----KAMTASAAPGERRALFEGTATRVYRL 408          
BLAST of NO08G02780 vs. NCBI_GenBank
Match: WP_046194375.1 (hypothetical protein [Sphingomonas sp. SRS2] >KKC25439.1 hypothetical protein WP12_14490 [Sphingomonas sp. SRS2])

HSP 1 Score: 129.4 bits (324), Expect = 2.400e-26
Identity = 109/365 (29.86%), Postives = 155/365 (42.47%), Query Frame = 0
Query:   34 LPIVDPHFHIWDANTLPNPNLGELTMKALPVYSFLNYEQDCGVGVAGSVHIEAVVGQAKGAAKALDPVAETRFVLEKVGAEGVKN--------VNIVAFVKLSAMPEAQAVIDAHKHLAAERFVGVRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQVNWFQLQDAATFLQAFPETVVIVDHMGCLKLGAGD-EEDAKRIAVWQEGMKALAALPNVYVKLSMLEYM-----RSGWQHKETGIATAEVMSSEISAAGNDVEKEISEGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTTLEALVLAQHALVSDLPEEQTLQLFSETAKKVYKL 385
            LPI+D H HIW     P        ++   V    +Y+++CG  +  +V  EA         +AL PV ET +V  +VG E  +           I+A   L    +  AV+DAH+  + +R  G R +    +D P       E G     G  +F+ GF  +A RGLS+D  +   QL + A   ++FP+T +I+DH+G   +G G     A     W++GM A AA  N +VKL  L        R G +   T I  AE+    I  A                             I+ FG++RCMF SNFPVD+         T    L  A   + + L      QLFS TA +VY L
Sbjct:   20 LPIIDSHHHIWPVAPAPG-------LENWDVPDLRSYKRNCGHNIVATVFCEAHANYRTDGPEALRPVGETEYV-NRVGEEAEQEGGKLSGLCAAIIANADLMLGADVAAVLDAHRAASPKRLRGTRYMTANDADIPMPPPFDTEPGMM---GRAAFRAGFEQVAKRGLSYDAFILHPQLPEVADLARSFPDTKIIIDHVGG-PVGIGRFNGTAASFDEWKDGMAAFAAQKNSFVKLGGLHLWFTGMGRVGAERPRTSIEIAEIHGEHILTA-----------------------------IDLFGADRCMFESNFPVDR-------MDTGATILWNAFKRITAQLDPADRAQLFSGTAARVYGL 336          
The following BLAST results are available for this feature:
BLAST of NO08G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009035939.16.300e-2731.69hypothetical protein AURANDRAFT_59989 [Aureococcus... [more]
WP_016747643.16.300e-2730.73amidohydrolase [Sphingomonas wittichii][more]
OYU70687.16.300e-2731.55amidohydrolase [Alphaproteobacteria bacterium PA2][more]
WP_095011114.11.100e-2631.00amidohydrolase [Altererythrobacter mangrovi][more]
WP_030092658.11.400e-2631.01amidohydrolase [Sphingomonas sp. DC-6] >ARR54671.1... [more]
WP_056358528.11.400e-2630.08MULTISPECIES: amidohydrolase [Sphingomonas] >KQX17... [more]
OJU55937.11.400e-2631.02amidohydrolase [Alphaproteobacteria bacterium 62-8... [more]
SFE13512.11.800e-2630.87Predicted metal-dependent hydrolase, TIM-barrel fo... [more]
WP_092956029.11.800e-2630.87amidohydrolase [Acidovorax konjaci][more]
WP_046194375.12.400e-2629.86hypothetical protein [Sphingomonas sp. SRS2] >KKC2... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008751NSK008751Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02780.1NO08G02780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669552gene_3609Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g186gene3788Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02780.1NO08G02780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02780 ID=NO08G02780|Name=NO08G02780|organism=Nannochloropsis oceanica|type=gene|length=1711bp
ATGAATCCGGACAAGGCCGGGTCAGGTAATCTGGCGCCCACCCACAGgta
aggcatctgccctcctctccctacatagatcccacccaccaccgccgcac
acaaacaacacaacacctgcaatccaaacaccatcatctcccgtaaattg
ctgcaggaaaggaatatccaatttttatcagaattaaatcagcaggattc
atgaagtcatgagtgaaagtttaatgaaaatgtgattgcgaatgtaattt
ccgaacaacaactcaacctcctgccctccactgtggcagaatctgcggta
acttaaaccacaaataatttaaagctttaaattttgtgacactcgtttac
tgtctaccacgcttaggtctgcgcacctatggcttatgaagcataaaggg
gatcgggttcggggtcggttgaagtttgccacgtagtgttcggtgcagca
ttattttcttccagaggcacaactggcgacgcacacacgtacacatcact
ctagaacaatcggggtgcgacagcatacctaaccacaatgcccttgagga
atcttttatggagcaactcaaaccagactaaacgcatactccccacatag
CCACCACATCAACGACGTCCTCATCCCCAATATGCCAACAACACTACCAC
CGCTCCCCATTGTGGATCCTCACTTCCACATTTGGGACGCCAACACGCTT
CCCAACCCCAACCTCGGTGAGCTGACCATGAAAGCGCTGCCCGTTTACAG
CTTCCTGAATTACGAGCAGGACTGTGGCGTGGGGGTGGCGGGCTCCGTTC
ACATCGAAGCCGTCGTTGGTCAGGCCAAGGGTGCTGCAAAAGCGTTAGAC
CCCGTCGCAGAGACGCGTTTCGTCCTTGAAAAAGTTGGAGCCGAAGGAGT
GAAGAACGTCAACATTGTAGCGTTTGTAAAGCTCAGTGCCATGCCCGAAG
CACAGGCCGTCATCGACGCGCACAAACACCTGGCGGCTGAGCGATTCGTT
GGCGTGCGGATGATTTTGAATTATTCTTCCGATGACCCGTCTTTGACCTG
GCCTCAAGTGGAGCGCGGCGATTTCCTCACAGGCGGCGTACCATCGTTCA
AGGAGGGCTTTGCACTGCTTGCCCCGCGGGGGTTATCCTTCGATTTGCAA
GTCAATTGGTTTCAGCTTCAAGACGCTGCAACATTTTTGCAGGCCTTTCC
CGAAACGGTGGTTATTGTTGATCATATGGGTTGCTTGAAATTGGGGGCTG
GAGATGAAGAGGACGCCAAGCGCATTGCTGTGTGGCAAGAGGGTATGAAG
GCGTTAGCTGCTTTGCCGAATGTGTACGTGAAGTTGTCGATGTTGGAATA
CATGCGTTCAGGGTGGCAGCACAAAGAGACGGGAATAGCGACGGCAGAGG
TAATGTCAAGCGAGATCAGTGCCGCTGGGAACGATGTGGAGAAGGAAATA
AGCGAGGGCAGCAGCAGCACCACCAATGCTAATACTGTTGTGAAGGCGCG
TGTCCGAGAAGTTATTGAGTGGTTTGGGTCCGAGCGGTGTATGTTCGCGA
GTAACTTCCCAGTGGATAAGTGTCTGTTGGGTGGTGACGCTCAGCCGACC
ACGCTTGAGGCGTTGGTGCTGGCGCAGCATGCGTTGGTAAGTGACTTGCC
GGAGGAGCAGACACTGCAACTGTTTTCAGAGACGGCCAAGAAGGTATATA
AGCTCAAATAG
back to top

protein sequence of NO08G02780.1

>NO08G02780.1-protein ID=NO08G02780.1-protein|Name=NO08G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=386bp
MNPDKAGSGNLAPTHSHHINDVLIPNMPTTLPPLPIVDPHFHIWDANTLP
NPNLGELTMKALPVYSFLNYEQDCGVGVAGSVHIEAVVGQAKGAAKALDP
VAETRFVLEKVGAEGVKNVNIVAFVKLSAMPEAQAVIDAHKHLAAERFVG
VRMILNYSSDDPSLTWPQVERGDFLTGGVPSFKEGFALLAPRGLSFDLQV
NWFQLQDAATFLQAFPETVVIVDHMGCLKLGAGDEEDAKRIAVWQEGMKA
LAALPNVYVKLSMLEYMRSGWQHKETGIATAEVMSSEISAAGNDVEKEIS
EGSSSTTNANTVVKARVREVIEWFGSERCMFASNFPVDKCLLGGDAQPTT
LEALVLAQHALVSDLPEEQTLQLFSETAKKVYKLK*
back to top
Synonyms
Publications