NO08G02770, NO08G02770 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_005856076.1 (hypothetical protein NGA_2123710, partial [Nannochloropsis gaditana CCMP526] >XP_005856158.1 hypothetical protein NGA_2123720, partial [Nannochloropsis gaditana CCMP526] >EKU20203.1 hypothetical protein NGA_2123720, partial [Nannochloropsis gaditana CCMP526] >EKU20286.1 hypothetical protein NGA_2123710, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 248.8 bits (634), Expect = 2.600e-62 Identity = 106/130 (81.54%), Postives = 121/130 (93.08%), Query Frame = 0 Query: 187 RNCGQLVCRKCSKSRWPQGMLPSTYHNNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVREYPVHCAAEGGNLEVLRWLIDELGCPLYETTDGAAPLVTQKGDSVLGVAARY 317 RNCGQLVC KCSKSRWP+GMLPSTYHNNE TVR+CDACNHLAWNFRRALK+GD R LEL ASGN+NIW PF++ESVREYPVHCAAEGGNL++LRWL++ELGCPLYET DGA+PL+T +GDSVLGVA+R+ Sbjct: 1 RNCGQLVCPKCSKSRWPRGMLPSTYHNNESTVRVCDACNHLAWNFRRALKEGDRIRALELFASGNLNIWMPFIIESVREYPVHCAAEGGNLDLLRWLVNELGCPLYETADGASPLLTHRGDSVLGVASRH 130
BLAST of NO08G02770 vs. NCBI_GenBank
Match: GAX16980.1 (hypothetical protein FisN_5Hh359 [Fistulifera solaris]) HSP 1 Score: 153.3 bits (386), Expect = 1.500e-33 Identity = 81/196 (41.33%), Postives = 114/196 (58.16%), Query Frame = 0 Query: 145 TEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPF-LVESVREYPVHCAAEGGNLEVLRWLIDELGCPL--------YETTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKG 331 TEE A+A R PP E KG C++C L + P HCRNCG +VC++CS + WP M+P TY+ E +V +C +C+ L+ NFR AL G+ R + L A+GN+N+ PF V+ YPVH A GG+L +L+WL+DE CP+ E P+VT KG S+LG+A + I+R+L+ KG Sbjct: 640 TEEAAVAFARAWTPPRMKE--KGPNCHICNSKFALLRRPCHCRNCGVVVCKECSVN-WPSKMIPDTYNIKKESSVNVCRSCDWLSSNFRLALLQGNQDRAVALHATGNINLHAPFGNVKGELLYPVHSAVLGGSLPLLKWLVDENSCPIKSLRVSGSREYGGSYIPIVTSKGRSLLGIALENRNVDIVRYLIVEKG 832
BLAST of NO08G02770 vs. NCBI_GenBank
Match: GAX25275.1 (hypothetical protein FisN_5Lh359 [Fistulifera solaris]) HSP 1 Score: 152.5 bits (384), Expect = 2.500e-33 Identity = 93/259 (35.91%), Postives = 136/259 (52.51%), Query Frame = 0 Query: 85 NGATYGTIRPVPRQYLNYHV-RQRENGAWQATVSLVQPFVRGLFTDPQGMRPAYITMGFY--GTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPF-LVESVREYPVHCAAEGGNLEVLRWLIDELGCPL--------YETTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKG 331 +G T VPR L + V W AT+ Q + +D + A ++ + TE+ A+A R PP E KG C++C L + P HCRNCG +VC++CS + WP M+P TY+ E +V +C +C+ L+ NFR AL G+ R + L A+GN+N+ PF V+ YPVH A GG+L +L+WL+D+ CP+ E P+VT KG S+LG+A + I+R+LV KG Sbjct: 588 SGETDNADAVVPRTLLPWSVIPNSATNTWTATIQTNQNALER--SDRMSIAEANKSLRAFVLPTEKAAVAFARAWTPPRMKE--KGPHCHICNSKFALLRRPCHCRNCGVVVCKECSVN-WPSKMIPDTYNIKKESSVNVCGSCDWLSSNFRLALLKGNQDRAVALHATGNINLHAPFGNVKGELLYPVHSAVLGGSLPLLKWLVDDNSCPIKSLRVSGSREYGGSYIPVVTSKGRSLLGIALENRNVDIVRYLVVEKG 841
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_002178990.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49688.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 149.8 bits (377), Expect = 1.600e-32 Identity = 87/272 (31.99%), Postives = 140/272 (51.47%), Query Frame = 0 Query: 110 GAWQATVSLVQPFVRGLFTDPQGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVRE---YPVHCAAEGGNLEVLRWLIDELGCPLYE------TTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTID-FLLREECGGEGG---EKGGGVVR 368 G W T++ Q RG+ +P ++ + TE+ A + +APP + C+ C ++K HCRNCG +C CS S WP MLP TY+ NE ++++C +C+ L+ F++AL + + + + +GNVN+ TPF + ++ YP+H A EGGNL++ RWL+++ CPL + +D A + T KG +VL +A + R I+R+LV +G E + TI+ L+ C EG E G + R Sbjct: 505 GLWITTINTNQ---RGVSKNP-AQANKFLKAFSFPTEKEARESAIANAPPKMVSFQESAKCFHCRKLFAVFKRACHCRNCGVCICASCSIS-WPAKMLPETYNLKNEASLKVCTSCDTLSSLFKKALLEAKYEEAIAIYETGNVNLRTPFPPANKKDEVLYPIHAAIEGGNLKLARWLVEDRFCPLKQIRAGRSKSDKNALIQTSKGRTVLSIAMEFLRIGILRFLVVERGISVFEATDTRSALRTIEAALVALPCSSEGDGIREDGASIAR 771
BLAST of NO08G02770 vs. NCBI_GenBank
Match: XP_002178993.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49691.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 149.8 bits (377), Expect = 1.600e-32 Identity = 87/272 (31.99%), Postives = 140/272 (51.47%), Query Frame = 0 Query: 110 GAWQATVSLVQPFVRGLFTDPQGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVRE---YPVHCAAEGGNLEVLRWLIDELGCPLYE------TTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTID-FLLREECGGEGG---EKGGGVVR 368 G W T++ Q RG+ +P ++ + TE+ A + +APP + C+ C ++K HCRNCG +C CS S WP MLP TY+ NE ++++C +C+ L+ F++AL + + + + +GNVN+ TPF + ++ YP+H A EGGNL++ RWL+++ CPL + +D A + T KG +VL +A + R I+R+LV +G E + TI+ L+ C EG E G + R Sbjct: 505 GLWITTINTNQ---RGVSKNP-AQANKFLKAFSFPTEKEARESAIANAPPKMVSFQESAKCFHCRKLFAVFKRACHCRNCGVCICASCSIS-WPAKMLPETYNLKNEASLKVCTSCDTLSSLFKKALLEAKYEEAIAIYETGNVNLRTPFPPANKKDEVLYPIHAAIEGGNLKLARWLVEDRFCPLKQIRAGRSKSDKNALIQTSKGRTVLSIAMEFLRIGILRFLVVERGISVFEATDTRSALRTIEAALVALPCSSEGDGIREDGASIAR 771
BLAST of NO08G02770 vs. NCBI_GenBank
Match: CBJ32496.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 141.0 bits (354), Expect = 7.600e-30 Identity = 80/241 (33.20%), Postives = 118/241 (48.96%), Query Frame = 0 Query: 131 QGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPL-----HCRNCGQLVCRKCSKSRWPQGMLPSTYH--NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVREYPVHCAAEGGNLEVLRWLIDELGCPLYETTDGAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTIDFLLREECGGEGGEKGGG 365 Q P + G + T A A + PVW EP C C +++++ L HCRNCG+LVC C+ WP+ MLP +Y + ER VR+C C + FRRAL G + +E +G VN+ PF S RE PVHCAA GGN+ ++ WL+++ CP++ + P + G SV+ AA R +MR+L + S + W + LR + ++G G Sbjct: 482 QDQVPTPLVCGKFATSYEADRAAEAFSSPVWHEPTPNSTCAEC---QSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPF---SDRELPVHCAAAGGNVSLMMWLLEDRCCPIFMDDEKTMPHLDGAGRSVMAAAADSGRVEMMRYLTFTQPSAASGMGMAP-FWRGLQACLRNDEDKHDDDRGRG 715
BLAST of NO08G02770 vs. NCBI_GenBank
Match: GAX16979.1 (hypothetical protein FisN_5Hh358 [Fistulifera solaris]) HSP 1 Score: 140.2 bits (352), Expect = 1.300e-29 Identity = 82/253 (32.41%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 109 NGAWQATVSLVQPFVRGLFTDPQGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVRE---YPVHCAAEGGNLEVLRWLIDELGCPLYETTD----------GAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTID 348 N A ++ + RG+ DP F+ E +A N APP C+MC N+++ P HCRNCG VC+ CS S W +P TY+ N+ +V+IC C+ L+ F+ AL G+ + + SGNVN+ TPF + + YPV CA +GGNL+V+RWLI++ CP+ + A + T KG +VL +A + I+R+ V + CR L G D Sbjct: 84 NAATNLWITTINTNQRGVAKDPNLANKYLKAFSFHSEHEARESAIAN-APPKMVPLSDSPSCFMCEGKFNVFRRPCHCRNCGVCVCKDCSTS-WSAKQIPDTYNLKNKTSVKICKGCDTLSSKFKEALLAGNLEDAIAIYISGNVNLRTPFPERNKKGELIYPVMCAVQGGNLDVVRWLIEDHFCPIKQIQQTGLGRMAKRGEGALITTSKGRTVLSIALEGLQIDILRYFV---------VDCRMSLHGVAD 325
BLAST of NO08G02770 vs. NCBI_GenBank
Match: OEU09625.1 (hypothetical protein FRACYDRAFT_248469 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 139.4 bits (350), Expect = 2.200e-29 Identity = 84/282 (29.79%), Postives = 141/282 (50.00%), Query Frame = 0 Query: 73 PSTSLSASSSSGNGATYGTIRPVPRQYL----NYHVRQRENGAWQATVSLVQPFVRGLFTDPQGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVRE----YPVHCAAEGGNLEVLRWLIDELGCPLYETTDGAA----------PLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSE 336 P ++ S++ S+ + A++ + + L YH W AT++ Q +G+ +P M Y+ + E A + +APP + C++C +++ HCRNCG VC CS + WP +P TY+ E V+IC +CN L+ F+++L +GD+ + L SGNVN+ TPF S ++ YP+HCA EGG+++++RWL+++ CP+ G P++T K SVL +A + ++R+LV G E Sbjct: 404 PRSNHSSNGSASSAASWQQPERIHSRILLTATVYH--NTATNLWIATINTNQ---KGVAKNP-AMASRYLKAFSFSNENEARESAIANAPPKMMKFDDHQNCFVCQGKFAMFRRACHCRNCGVCVCSGCS-TTWPAKAIPDTYNLKKESQVKICKSCNFLSGAFKKSLLEGDYEEAIALYGSGNVNLRTPFPQFSGKKEEVVYPMHCAVEGGDIDIVRWLMEDHFCPVKVIRAGGKRSKKGGSTDFPILTSKNRSVLTIAMEHLHVKLLRYLVVDNGVSIYE 678
BLAST of NO08G02770 vs. NCBI_GenBank
Match: CBN78436.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 136.7 bits (343), Expect = 1.400e-28 Identity = 65/166 (39.16%), Postives = 93/166 (56.02%), Query Frame = 0 Query: 131 QGMRPAYITMGFYGTEEGALAACRNHAPPVWAEPVKGCVCYMCLDGKNLY--KSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH--NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVREYPVHCAAEGGNLEVLRWLIDELGCPLY 293 Q P +++G Y T A + +PP+W EP K C +C D Y K HCRNCG+LVC C++ WP+ MLP TY+ +E+ VR+C +C +FR+A G + ++G VN+ P+ + E PVHCAA GGNL +L WL+D+ CPL+ Sbjct: 19 QDAEPVEVSVGVYDTAYEGQRAAESFSPPLWQEPGKDSRCAVC-DSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYH-NELPVHCAASGGNLNILAWLVDDRCCPLF 182
BLAST of NO08G02770 vs. NCBI_GenBank
Match: GAX25274.1 (hypothetical protein FisN_5Lh358 [Fistulifera solaris]) HSP 1 Score: 126.7 bits (317), Expect = 1.500e-25 Identity = 68/192 (35.42%), Postives = 100/192 (52.08%), Query Frame = 0 Query: 170 CYMCLDGKNLYKSPLHCRNCGQLVCRKCSKSRWPQGMLPSTYH-NNERTVRICDACNHLAWNFRRALKDGDWTRVLELCASGNVNIWTPFLVESVRE---YPVHCAAEGGNLEVLRWLIDELGCPLYETTD----------GAAPLVTQKGDSVLGVAARYQRTAIMRWLVTVKGCKTSEIVCRQLLWGTID 348 C+MC N+++ P HCRNCG VC+ CS S W +P TY+ N+ +V IC C L+ F+ AL G+ + + SGNVN+ TPF + + YPV CA +GGNL+V+RWL+++ CP+ + A + T KG +VL +A + I+R+ V + CR L G D Sbjct: 10 CFMCEGTFNVFRRPRHCRNCGVCVCKDCSTS-WSAKQIPETYNLKNKTSVNICKGCEILSSKFKEALLVGNLDDAISVYGSGNVNLRTPFPQRNKKGELIYPVMCAVQGGNLDVVRWLVEDHFCPIKQVQQTGLNRASKRGEGALMTTSKGRTVLSIALEGLQIDILRYFV---------VDCRMSLHGVAD 191 The following BLAST results are available for this feature:
BLAST of NO08G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02770 ID=NO08G02770|Name=NO08G02770|organism=Nannochloropsis oceanica|type=gene|length=1110bpback to top protein sequence of NO08G02770.1 >NO08G02770.1-protein ID=NO08G02770.1-protein|Name=NO08G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
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