NO08G02430, NO08G02430 (gene) Nannochloropsis oceanica

Overview
NameNO08G02430
Unique NameNO08G02430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2361
Alignment locationchr8:705462..707822 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:705462..707822 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02430.1NO08G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02430.1NO08G02430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02430 ID=NO08G02430|Name=NO08G02430|organism=Nannochloropsis oceanica|type=gene|length=2361bp
AGCGCGGGATTCATGATTGCCTGTGAATGGGGTGAATGGGGTGCTTGAGG
TAGACTCTGACAAGCAAGGACGAAGAGGGAGGAGAGGAGGTGGAGTCAGT
CGGCAGCGACGAGACTGGTCAAGACAGGTGCCAGAGCCGCACAAGCCCCG
AGATGTTTCAAATCTGTACAATATGAGTGCCCTGACCATGAGGATGTGAT
GCTATGCACGGTACAGTGTCTGACTGCTGCGGCAAAAGTGTCTTATCAGA
TCTCTGAGCCAAACATGCCACGCCAACGCCAAATAATATGTGAACATGCA
TGTGACGCATCATGATAATAGACTACAGCTATAGCGCTACGCGCCCGTGC
TTCGCGAAAACTCTCAGAGGAAATTGATTGCTCGATTGACGAAAGGTGAG
ACGTCAAAGGCTAATTGTGACGCGGCCGGTGCTCACATACGGACTCGGTA
AGTGCTCACTTGGGGAACCTCGAAGCCCGGCGCTAAAGTTGCTTCGTCGC
GTTGCGTTAACTACTGTTTTACGCCCGCGCGTGCGCACAGGGGCCGTTAT
TCTTTTGACGCGTTCGCCTCGTGCCAAGCGGCATCGTCCGAACGTGTCCA
AAAAAGGATTGAGTGCACGAAAGGCCTCGGGGATGTTAGGGTACTGCCCT
TGCTTGCTTCCCTCATCTCAACGACACATGTCTCGGGCTCATTAGACACA
TACGTACCCCAGGCTCCCGGATGTGTGGGAAATAATAGGGGGCAATCTGT
ACTTTCTTTACTTACAACCTTTCCTCACACTTCTTCCTTCCTCATTCTCT
ACAAATACACAGTAATGCTACTTCTTATCCTCACCTGGCTGCAGAGGATG
CCGGCCTCCGACGCCTTCCTCCACCATTCGAAGATATCAGTCCTGACCTG
CTCCTCAGCAGCCTGATTTGGTATTTACGGTAACGAAGCTCCCCAAATTA
CTCATTTTGTGTCAGCTATGAATTCTTCTTCCTCCTCCACGTCGTCTTCC
ATCTCCTTCACCACATATTCCTCGTCGTTGCTGCCTTTGGATCCGACGGC
GCTAGCACTGTATCAGgtatgtcccacgtattcgaggacgggtcgagatc
atctcgacccgtcctcgatgatgcgtgattgttgtaagaacccacttgag
atgtctccgtcctcattcacggcatgtgatgggagtgaatatttttccac
ttgcatccatgcatctggcctccctccctccgccacgccctctctttctt
ttggcagtgttcaccagactcttgatatttcatctgcttctcctcatttg
atagATACCTCCATGAATTTCAGCTTAGACCGCTGGGAATTCAAGGCAAG
CAACGAGCTGAGCGACGAACTAGGCTGTTTTTTGAAGGGTGGAGATTGAT
GAAGATTCTTCCACGCGACGGGGCATCGCAAGAACGATTAGGGCCTCATG
GTCGACTGTTAAAGTTTTACGAAATGGATCCTTCTCTTTGCAAGCGATTG
CGTCTTCATTTTCCCCTTCTGAAGCGATCACGATGGCAGCAAGCACCGTC
AGCTCCATCACCACCCGCGAGGAGACAAGCCGAATGTCACCCGGTGGCTT
TGGTAAGCAACCCTCGGAGAGCGACCGGGTCTTCGGCACCTTGACCTTCG
AGGTGGACCAGACGGAGGAAATAAGTTCATTCTTGGGGGGTTTAGGGATG
CCGCAATCGTTCCTGAACCGCCCACAGACCGTGCGGGACCTAGGTGGGAA
GCAGAGGGAGGTACTCGTCACAGTTGTGAGCATGGACACAATCATCCTCC
TCTTTGTGGAGCGAAGCAAGTTTTATGTCCCTACACGTTCCACACCATCA
TCTAATTCTTCGGATGCCCGAGTGCCTACTTCCCTGAACTCGTGCTCGTG
ACGCATATTTTTTCCATGGTTGCCACGGCGGTCGCGGACGCCCTCCGCTC
CGATCTGATGCATTTTTTGGATAGATAGAAAGACATTAAGAGATAAATCC
TCCCTCCTGCTGCGACGATGCAAAAGTGAAGCAGTGTTAAGTCGCGCAGT
TTACTGCCTTGCCGTCCACTAACTACTGAGCAAGTGGGAAAACTAATCAC
AGGCATCCACGTCAATCTCCCACTTCCTATTTTGTCTGTAAATTTTGTTG
ATTAGCGAAAATCAGGATCGATCGAGTAAAAATGTGTCTGTCATCAACCA
TTTAATGTCTGGGCCTCTGTCGGGAAGTGGCTGTCTCCCCGCCTTTACTT
GATACGATTAGTCAGTCCCTCTGTCTGTCAGTCCATCACTTTATGGATGG
GCGGATCGGGTGCCTGTGTGAAGGAGGCACACGCAGAACCCCTAAAACAA
ATTAGTCCGGA
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protein sequence of NO08G02430.1

>NO08G02430.1-protein ID=NO08G02430.1-protein|Name=NO08G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=123bp
MAASTVSSITTREETSRMSPGGFGKQPSESDRVFGTLTFEVDQTEEISSF
LGGLGMPQSFLNRPQTVRDLGGKQREVLVTVVSMDTIILLFVERSKFYVP
TRSTPSSNSSDARVPTSLNSCS*
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Synonyms
Publications