NO08G02320, NO08G02320 (gene) Nannochloropsis oceanica

Overview
NameNO08G02320
Unique NameNO08G02320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1416
Alignment locationchr8:675971..677386 +

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Properties
Property NameValue
DescriptionPeroxisome membrane protein, Pex16
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:675971..677386 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013919Pex16
Vocabulary: Biological Process
TermDefinition
GO:0007031peroxisome organization
Vocabulary: Cellular Component
TermDefinition
GO:0005778peroxisomal membrane
GO:0005777peroxisome
Homology
BLAST of NO08G02320 vs. NCBI_GenBank
Match: EWM26598.1 (Peroxisome membrane protein, Pex16 [Nannochloropsis gaditana])

HSP 1 Score: 365.9 bits (938), Expect = 1.800e-97
Identity = 243/473 (51.37%), Postives = 302/473 (63.85%), Query Frame = 0
Query:    1 MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAALLPHPEDRIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHLQHQEGNTETKLILDGGRVITSFDNPM-SPLPLTTTTMSAAGPSLGPASESPAVDADXXXXXXXXXXXXXXXXXXXXECKRREDSTPRHEWRRGRRTGRKFLYYAGGERNQVVEEGKNGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVAPITAVADNVICPGLVRSMEEEEAVVAKARTRLLLTGEVLHILRPLLFAYLRWLLARRRFYIQRPVAIAASVGSGRKRTIPELLSSLPSAAPEWLPLLLPGLIDAVSHQCIMSAID-RNATLKQSYHDELQRRKNLWLLYLLRTPVFESLTQPFAGALDRSVGRVPLVGGLANYGFQALLYVQRHFTLTSGS 472
            +++Y++FVRNHAL VRP+EGL+RTVTFFLPSRF+ENGNGEI +E ALAASNV+TLVNDL+LL P RNT  LLP  EDR+GL L+LISHTEVL EK+SMRLG+G +H VVL LEALK +LRL+L+ LQ Q G     ++LDGGR I +F  P+ S  P ++T    +   +  +  +  V+ D                       +R +     EW+RGRRTGRKF Y++  E     ++  +                      XXXXXXXXXXXXXX  AP T   + V     +    EE   VA+AR RLLL GE+LHILRPL+ A LRW LARRR    R VA A  +G   +R        L SAAPE L +LLP L+D VS+QC   A++  +  LKQS  DEL+RRKNLWLLYLLRTPVFE LT P   A+D S+ R+PLVGGLA+Y +QAL+Y+QRHFTLTSGS
Sbjct:    4 VDSYISFVRNHALFVRPLEGLIRTVTFFLPSRFYENGNGEIVSEGALAASNVMTLVNDLVLLGP-RNT-PLLPKEEDRLGLTLLLISHTEVLAEKISMRLGDGTDHLVVLWLEALKVLLRLRLVSLQQQHGGNANVVLLDGGRAIPTFHRPVESARPSSSTPGETSSLGVKNSGATSGVEEDQEDEEVLLRVLPEEVAR-----PKRAECREGQEWKRGRRTGRKFRYFS--ESYNGDDDYGSNRHLIGDLTRCNARWTLSSPSPXXXXXXXXXXXXXXXXAPTTGDCEGVAVG--IEWTREERPEVAQARARLLLAGEILHILRPLVLASLRWALARRRRVKGRAVA-APPMGRSLRR------GPLHSAAPESLLVLLPALMDLVSYQCTTGALNGGDNALKQSCEDELRRRKNLWLLYLLRTPVFEGLTHPVTRAVDGSLVRLPLVGGLASYSYQALIYIQRHFTLTSGS 458          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: CBN78132.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 75.5 bits (184), Expect = 5.000e-10
Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = 0
Query:  314 LLTGEVLHILRPLLFAY----------LRWLLARRRFYIQRPVAIAASVGSGRKRTIPELLSSLPSAAPEWLPLLLPGLIDAVSHQCIMSAIDRNATLKQSYHDELQRRKNLWLLYLLRTPVFESLTQPFAGALDRSVGRVPLVGGLANYGFQALLYVQRHFTLTSGS 472
            L+ GEV+HILRPL ++Y            WL++          A A +  +G       LL+ +  A    +P+L                      L +    EL+RRK LW LYL+R+P FE L +P +         VP++GG+A Y    LLYVQRH   TS S
Sbjct:  346 LMAGEVIHILRPLAYSYGCAATGERSWRPWLISLG----MDAAAFACTARAGGSSGAMALLTPIGEAGSSGVPVL--------------------PYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: XP_013431168.1 (peroxisomal membrane protein pex16 [Aureobasidium namibiae CBS 147.97] >KEQ76641.1 peroxisomal membrane protein pex16 [Aureobasidium namibiae CBS 147.97])

HSP 1 Score: 70.1 bits (170), Expect = 2.100e-8
Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 0
Query:    1 MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAAL-LPHPE----------------DRIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +  Y +FV  +A  V  +EG LR++T+ LP RF +    EI +E+  ++  +L++ +D +L R V+   AL  PHP                  R+ ++L ++ +TE+L E  + R G  A   VV+ LE++KA+ RL L+ L
Sbjct:   22 LRMYGDFVTKNASAVGQIEGALRSLTYILPGRFRDT---EIASESLHSSVQLLSIYHDSLLARAVQRLPALQRPHPSPHTRYTRFWAQHSPAYKRLAMLLQVVQYTELLCEMAAKRRGEKARWKVVVLLESVKALCRLLLMRL 161          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: PLW29416.1 (hypothetical protein PCASD_20377 [Puccinia coronata var. avenae f. sp. avenae])

HSP 1 Score: 68.9 bits (167), Expect = 4.700e-8
Identity = 47/143 (32.87%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    2 NTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAA-----------------LLPHPEDRIGLVLMLISHTEVLLEKVS-MRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +TY +F+ ++A  +  +E  LR+ T+FLP RF +    E+ +E+   A N+L+L +D I+ + V + A+                  +    D +   L +ISH+++L+E V+  RLG+     VVL LE +KA+LRLKL++L
Sbjct:    3 STYQDFLLSNATRITSIESTLRSFTWFLPGRFKD---AELASESLYTALNLLSLYHDRIITKVVSSLASSQKPAQTSHARYTSAWCTVSSTYDVVAHALAMISHSQLLIEMVARRRLGSQRRWRVVLMLELIKALLRLKLINL 142          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: PLW34375.1 (hypothetical protein PCANC_21693 [Puccinia coronata var. avenae f. sp. avenae])

HSP 1 Score: 68.9 bits (167), Expect = 4.700e-8
Identity = 47/143 (32.87%), Postives = 80/143 (55.94%), Query Frame = 0
Query:    2 NTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAA-----------------LLPHPEDRIGLVLMLISHTEVLLEKVS-MRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +TY +F+ ++A  +  +E  LR+ T+FLP RF +    E+ +E+   A N+L+L +D I+ + V + A+                  +    D +   L +ISH+++L+E V+  RLG+     VVL LE +KA+LRLKL++L
Sbjct:   26 STYQDFLLSNATRITSIESTLRSFTWFLPGRFKD---AELASESLYTALNLLSLYHDRIITKVVSSLASSQKPAQTSHARYTSAWCTVSSTYDVVAHALAMISHSQLLIEMVARRRLGSQRRWRVVLMLELIKALLRLKLINL 165          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: XP_007777013.1 (hypothetical protein W97_00912 [Coniosporium apollinis CBS 100218] >EON61696.1 hypothetical protein W97_00912 [Coniosporium apollinis CBS 100218])

HSP 1 Score: 68.6 bits (166), Expect = 6.100e-8
Identity = 49/143 (34.27%), Postives = 73/143 (51.05%), Query Frame = 0
Query:    1 MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPV-RNTAALLPHPE----------------DRIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +  Y +F+  +A  V  +E  LR++T+ +P RF E+   EI +E+  +   VL+L +D +L R + R   A  PHP                  RI L L +I +TE+L E  + R G      VV+ LEA+KA+ RL LL L
Sbjct:   22 LGMYEDFIVKNASAVAQIESGLRSLTYIIPGRFRES---EIASESLHSGVQVLSLYHDSLLARAIARLPGAQKPHPSPHNRYTKFWTQKSPTYKRIALTLQMIQYTELLWEMAAKRKGEKVRWRVVVLLEAIKALCRLLLLRL 161          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: KEQ62249.1 (peroxisomal membrane protein pex16 [Aureobasidium melanogenum CBS 110374])

HSP 1 Score: 68.6 bits (166), Expect = 6.100e-8
Identity = 46/143 (32.17%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    1 MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAAL-LPHPE----------------DRIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +  Y +FV  +A  V  +EG LR++T+ LP RF +    EI +E+  ++  +L++ +D +L R V+   AL  PHP                  R+  +L ++ +TE+L E  + R G  A   VV+ LE++KA+ RL L+ L
Sbjct:   22 LRMYGDFVTKNASAVGQIEGALRSLTYILPGRFRDT---EIASESLHSSVQLLSIYHDSLLARAVQRLPALQRPHPSPHTRYTRFWAQKSPAYKRLATLLQVVQYTELLCEMAAKRRGEKARWKVVVLLESVKAMCRLLLMRL 161          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: OBW69091.1 (Uncharacterized protein AUREO_008560 [Aureobasidium pullulans])

HSP 1 Score: 68.6 bits (166), Expect = 6.100e-8
Identity = 45/143 (31.47%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    1 MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAAL-LPHPE----------------DRIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +  Y +FV  +A  V  +EG LR++T+ LP RF +    EI +E+  ++  +L++ +D +L R V+   AL  PHP                  R+ ++L ++ +TE+L E  + R G  A    V+ LE++KA+ RL L+ L
Sbjct:   22 LRMYGDFVTKNASAVSQIEGALRSLTYILPGRFRDT---EIASESLHSSVQLLSIYHDSLLARAVQRLPALQRPHPSPHTRYTRFWSQKSPAYKRLAMLLQVVQYTELLCEMAAKRRGERARWRAVVILESIKAMCRLLLMRL 161          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: EPS40772.1 (hypothetical protein H072_5346 [Dactylellina haptotyla CBS 200.50])

HSP 1 Score: 67.8 bits (164), Expect = 1.000e-7
Identity = 47/141 (33.33%), Postives = 73/141 (51.77%), Query Frame = 0
Query:    4 YVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAALLPHPE------------------DRIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            Y +FV  +A  V  +E  LR++T+ +P+RF +    EI +E+  +   +L+L +D +L R V+N  A +P P                     I L++ +I +TE+L E  + R G      VV+ LEA+KA  RL LLHL
Sbjct:   23 YEDFVTKNAGAVSQIESSLRSLTYIVPARFKD---AEIASESIHSGIQLLSLYHDSLLSRAVKNLPASVPRPPLTPHARYTKFWTQKSSAYKNIALMVTMIQYTELLWEMAARRKGQRIRWRVVVILEAIKAACRLLLLHL 160          
BLAST of NO08G02320 vs. NCBI_GenBank
Match: XP_013340183.1 (hypothetical protein AUEXF2481DRAFT_69636 [Aureobasidium subglaciale EXF-2481] >KEQ91670.1 hypothetical protein AUEXF2481DRAFT_69636 [Aureobasidium subglaciale EXF-2481])

HSP 1 Score: 67.0 bits (162), Expect = 1.800e-7
Identity = 44/143 (30.77%), Postives = 74/143 (51.75%), Query Frame = 0
Query:    1 MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAASNVLTLVNDLILLRPVRNTAAL-LPHPED----------------RIGLVLMLISHTEVLLEKVSMRLGNGAEHSVVLSLEALKAILRLKLLHL 127
            +  Y +FV  +A  V  +EG LR++T+ LP RF +    EI +E+  ++  +L++ +D +L R ++   AL  PHP                  R+   L ++ +TE+L E  + R G  A    V+ LE++KA+ RL L+ L
Sbjct:   22 LRMYGDFVTKNASAVSQIEGALRSLTYILPGRFRDT---EIASESLHSSVQLLSIYHDSLLARAIQRLPALQRPHPSPHTRYTRFWTQKSPAYRRLATFLQVVQYTELLCEMAAKRRGEKARWKAVVILESIKALCRLLLMRL 161          
The following BLAST results are available for this feature:
BLAST of NO08G02320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 16
Match NameE-valueIdentityDescription
EWM26598.11.800e-9751.37Peroxisome membrane protein, Pex16 [Nannochloropsi... [more]
CBN78132.15.000e-1032.14conserved unknown protein [Ectocarpus siliculosus][more]
XP_013431168.12.100e-832.17peroxisomal membrane protein pex16 [Aureobasidium ... [more]
PLW29416.14.700e-832.87hypothetical protein PCASD_20377 [Puccinia coronat... [more]
PLW34375.14.700e-832.87hypothetical protein PCANC_21693 [Puccinia coronat... [more]
XP_007777013.16.100e-834.27hypothetical protein W97_00912 [Coniosporium apoll... [more]
KEQ62249.16.100e-832.17peroxisomal membrane protein pex16 [Aureobasidium ... [more]
OBW69091.16.100e-831.47Uncharacterized protein AUREO_008560 [Aureobasidiu... [more]
EPS40772.11.000e-733.33hypothetical protein H072_5346 [Dactylellina hapto... [more]
XP_013340183.11.800e-730.77hypothetical protein AUEXF2481DRAFT_69636 [Aureoba... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008801NSK008801Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02320.1NO08G02320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582604gene_3561Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g138gene3830Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02320.1NO08G02320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02320 ID=NO08G02320|Name=NO08G02320|organism=Nannochloropsis oceanica|type=gene|length=1416bp
ATGAATACCTACGTCAACTTTGTTCGAAACCACGCACTGCTCGTCCGCCC
AGTCGAGGGTCTGCTGCGCACTGTGACATTCTTCCTACCGTCCCGCTTCC
ACGAAAATGGGAATGGGGAGATCACCACCGAGGCAGCTTTGGCCGCCAGC
AATGTCCTCACCTTGGTGAATGATCTAATACTGCTTAGGCCAGTTAGAAA
TACGGCAGCACTCCTGCCCCACCCAGAAGACCGCATTGGGTTGGTCCTTA
TGCTCATCAGTCACACGGAAGTGCTGTTGGAGAAGGTTTCAATGCGGCTT
GGGAACGGCGCCGAGCATTCGGTGGTTTTGTCCCTGGAAGCCCTAAAAGC
CATCTTACGCCTCAAGCTTCTCCACCTCCAACATCAAGAAGGAAACACGG
AGACCAAGCTGATTCTGGACGGTGGGCGTGTCATCACATCATTTGACAAC
CCCATGTCGCCCCTCCCTCTGACCACGACGACGATGTCGGCAGCCGGCCC
GTCATTGGGACCAGCCTCCGAGTCCCCAGCGGTGGATGCCGACGAGGACC
AGGAGGAAGAGGAGATGCTGTTGCGTGTCGTACGGAGAAAAGGAGGAAGT
TTGGAATGTAAACGAAGAGAGGACAGTACCCCTCGGCATGAATGGAGGCG
GGGCAGACGGACAGGGCGCAAGTTTTTGTACTATGCAGGTGGTGAGAGAA
ACCAGGTTGTTGAAGAAGGTAAGAATGGATCCCATGAGGACGATCACGAC
AAGGCCAACATCGACTCCTCTTCCTCCCCGACTTCCTCGTCATCCTCCTC
GTCCGCGTCATCGTCAACGTCGCCAGCGCCTAGCCAGGTAGCACCTATTA
CGGCTGTGGCCGACAACGTTATTTGCCCGGGTCTGGTGCGATCAATGGAA
GAGGAGGAGGCTGTGGTTGCCAAGGCGCGCACCCGTCTATTACTTACAGG
CGAGGTGCTGCACATCTTGCGCCCTCTTCTATTTGCCTACCTGCGCTGGT
TGTTGGCCCGTCGACGCTTCTATATCCAACGTCCTGTCGCCATCGCAGCT
TCTGTCGGTAGTGGCCGTAAGCGAACCATACCAGAGCTGCTCTCCTCCTT
ACCGTCGGCAGCTCCTGAGTGGCTGCCCCTACTGCTTCCGGGTTTAATAG
ATGCCGTCAGCCACCAATGTATTATGAGCGCGATCGACCGAAATGCCACC
CTAAAGCAGTCCTACCACGACGAATTGCAGCGTCGCAAGAATCTCTGGCT
TTTGTACCTTCTCCGCACGCCCGTGTTTGAAAGTCTTACCCAGCCCTTTG
CGGGCGCTCTGGACCGCAGCGTTGGTCGGGTGCCATTGGTGGGTGGTTTG
GCCAACTACGGGTTCCAGGCCCTCCTTTACGTTCAGCGGCATTTCACCCT
CACCTCGGGCTCGTAA
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protein sequence of NO08G02320.1

>NO08G02320.1-protein ID=NO08G02320.1-protein|Name=NO08G02320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MNTYVNFVRNHALLVRPVEGLLRTVTFFLPSRFHENGNGEITTEAALAAS
NVLTLVNDLILLRPVRNTAALLPHPEDRIGLVLMLISHTEVLLEKVSMRL
GNGAEHSVVLSLEALKAILRLKLLHLQHQEGNTETKLILDGGRVITSFDN
PMSPLPLTTTTMSAAGPSLGPASESPAVDADEDQEEEEMLLRVVRRKGGS
LECKRREDSTPRHEWRRGRRTGRKFLYYAGGERNQVVEEGKNGSHEDDHD
KANIDSSSSPTSSSSSSSASSSTSPAPSQVAPITAVADNVICPGLVRSME
EEEAVVAKARTRLLLTGEVLHILRPLLFAYLRWLLARRRFYIQRPVAIAA
SVGSGRKRTIPELLSSLPSAAPEWLPLLLPGLIDAVSHQCIMSAIDRNAT
LKQSYHDELQRRKNLWLLYLLRTPVFESLTQPFAGALDRSVGRVPLVGGL
ANYGFQALLYVQRHFTLTSGS*
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Synonyms
Publications