NO08G02310, NO08G02310 (gene) Nannochloropsis oceanica

Overview
NameNO08G02310
Unique NameNO08G02310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2774
Alignment locationchr8:672790..675563 -

Link to JBrowse

Properties
Property NameValue
DescriptionActivating signal cointegrator 1 complex subunit 2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:672790..675563 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like
IPR003892CUE
Homology
BLAST of NO08G02310 vs. NCBI_GenBank
Match: EWM26745.1 (activating signal cointegrator 1 complex subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 562.8 bits (1449), Expect = 1.600e-156
Identity = 351/733 (47.89%), Postives = 426/733 (58.12%), Query Frame = 0
Query:   13 PFTTLWRTVSIGELPPYLPQDNGCRLEAVVLRIQAKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLTSEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVTGGLSRLVQAVPFTALTLAASPDLFLALRRTYGVLVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGCRQGQGLDTSGIAYLVELLNSSVGGAQGELTPRGLFM-SPHSHRNDKWGEEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTLPSPMGIYKHRKKDGGADEVDARDEDFIAHQKAYIRQMERDAEDNAFLLQEYDDDFDDQFQAEGVIFSRDMAREDFESVRKYNNLVKKEEEEDRFWKEMRLEQPDLPEVXXXXXXXXXXXXXXXXXXXXGFDADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGVGAGTTGTGRDTGPLSALARRRKEKQKHLRANHNRKNQAARKA 745
            P   +WR+  IGELPPYLPQDNGCRLEA +L++QA+ALQ LL+ KFP FASH LYN Q+  FLD YLN+A RP+E A D         E SL  VEAV TALHR V L YLR  TS +EQQQV  FA L    +V+D+P+ LDLCNLYGFTD  LL  LL  GA       LL+QL +AC  + ++  +L  AV   S  GE   DALEYL DVTGGLSRLV AVP T+L LA++P LF  L R Y VL+++ + AEG                   +  +  G    F C C+ AL+  VV GL+  A   E ALEALFT +S+L+Q                        A  G     R L+ DC     GL+ RLQ   SA    Q    D SG++YL+ELL S+ GG +      GLF+  P + R    G E  R++      V++MVQEVRQVCPGLGEGFVHACLAVM YN NMVVNALLEGSALPYPLDTLDR+LPSP+G  K RKK GG +  +ARDE+FIA QKAY+RQME+DAE++A+LLQEYDDDFDDQ+  E  +FSRD  REDFE++RKYNNL++KEEEE+ FW+ M+L+QP+LP +                      D D                                                  GRG    T      + P+SALARRRKEKQKHLRANHNRK +A RK+
Sbjct:   12 PLADMWRSAPIGELPPYLPQDNGCRLEAGLLKMQARALQTLLKMKFPAFASHILYNTQLESFLDTYLNYAPRPYEAAIDRRIGTSDRFESSLQGVEAVRTALHRSVLLAYLRFFTSHEEQQQVPSFATLASQSHVMDIPRALDLCNLYGFTDAGLLARLL-LGAIAFVESGLLSQLEDACRSVSEIFSDLEGAVASGSGDGET-QDALEYLTDVTGGLSRLVLAVPLTSLGLASTPRLFGGLGRIYDVLIARFE-AEGE---------TRGCSSNGERACKYAG----FACGCARALVGGVVAGLLALARTREGALEALFTFISELIQT-----------------TDADEEADEGGQGMGR-LVRDC---AGGLLSRLQAFLSAPADEQRPAPDMSGVSYLIELLRSTTGGYEAPTPRTGLFIKEPRAGR----GAEGERRVQRPARSVEAMVQEVRQVCPGLGEGFVHACLAVMGYNINMVVNALLEGSALPYPLDTLDRSLPSPLGADKLRKK-GGEEAEEARDEEFIARQKAYLRQMEKDAEEDAYLLQEYDDDFDDQYSGEQTMFSRDNTREDFEAIRKYNNLMRKEEEEEHFWEGMQLKQPELPTIARDSE-----------------DDDKDSRGRTKEPKSSSQTVLSGSGSFFINAREKSRVRGTSGSLLSRGESAAQGRGEDGAT------SHPMSALARRRKEKQKHLRANHNRKVKAVRKS 679          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: KFP19364.1 (Activating signal cointegrator 1 complex subunit 2 [Egretta garzetta])

HSP 1 Score: 79.3 bits (194), Expect = 5.500e-11
Identity = 116/510 (22.75%), Postives = 191/510 (37.45%), Query Frame = 0
Query:   47 AKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVTGGLSRLVQAVPFTALTLAASPDLF-LALRRTYGVLVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGCRQGQGLDTSGIAYLVE-----LLNSSVGGAQGELTPRGLFMSPHSHRNDKWGEEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTL-----PSPMGIYKHRKKDGGADEVDARDEDFI 543
            A  L  LL      F    +++  +   LD YL HA R F+   D H E           V  +   LHR VFL +LR+ T   S+D     + F  +I +  + D+P++LDLC L+G  +  LL  ++ E  F     S  + L EA P +   +EE    V   +   +   D + YL D    L   +   P    T       + LA      +   +S + +  +E                K++ I  F       C   +L +  + +    P  EE L+   ++L +    +                            +++    S  + +     I LQ + SA      +G+D      + +       N +   A+          + ++  ++  G      +   G E+ S++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDRT+     P P  +   R      DE D    D +
Sbjct:   63 ADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLCHAPRKFDALLDCHPE-----------VNDMQKCLHRSVFLTFLRMSTHKESKDHFITPSVFGEIIYNNFLFDIPKILDLCVLFGKGNGLLLQKMI-ENIFTQ-QPSYFSDLDEALPTVLQKLEEKVN-VTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYRLASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKKM-IEAFHILINQVCLQPILESSCENI---QPFIEEFLQIFASVLQERRFLRDYDELFPVE-----------------DDVSLLQQASSTLDETRTAYI-LQAVESA-----WEGVDRKKAQVVKDPAPPAASNGASAIAESTAEDMEKLGAAYASEDECAGAAAAPVVKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSV 530          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_013056662.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Anser cygnoides domesticus] >XP_013056663.1 PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Anser cygnoides domesticus])

HSP 1 Score: 79.0 bits (193), Expect = 7.100e-11
Identity = 124/534 (23.22%), Postives = 197/534 (36.89%), Query Frame = 0
Query:   47 AKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAF----RLFGDSLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVTGG------LSRLVQAVPFTALTLAASPDLFLALRRTYGV------LVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGCRQGQGLDTSGIAYLVELLNSSVGGAQGELTPRGLFMSPHSHRNDKWGEEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTL-------PSPMGIYKHRKKDGGADEVDARDE-DFIAHQKAYIRQME 554
            A  L  LL      F    +++  +   LD YL HA R F++  D H E           V  +   LHR VFL +LR+ T   S+D     + F  +I +  + D+P++LDLC L+G  +  LL  ++ E  F      FGD     L E  P +  V   +                 LE   +VT G      L  +V  +  T  TL A  D+F    +T+        L S  ++A    E                   RI     + V      L+N V        P  E + E +   + + +Q                         +      ++   S   + R   +++  + A  G  R+   +    IA      N +   A+     R    + ++  ++  G          G E+ S++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +P  LD LDRT+       P+P+   +H        ++ +RD  D    QK   R+ E
Sbjct:   63 ADDLDWLLALPHDKFWCQVIFDETLQKCLDSYLCHAPRKFDVLLDCHPE-----------VSDMQKRLHRSVFLTFLRMSTHKESKDHFITPSVFGEIIYNNFLFDIPKILDLCVLFGKGNGPLLQKMI-ENIFTQQPSYFGD-----LDETLPTVLQVFNNILHKCGLQCEGASAEPQKLEERVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYRLASFYELAIPELESAIKKRHYEDNSVFADLWRRI-SHSRKKVMEAFHILINQV-----CLQPILESSCENIQPFIEEFLQIFTSVLQERRFLRDYDELFPVEDDVS-----LLQQASSTLDETRTAYILQAVESAWEGVDRKKAQVTKDPIAAAAS--NGASAMAESTAEAREELGAAYASEDECAGAAAAPPTKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVP-SLDKLDRTMPRQPKPDPTPLLTSRHNVFQNDEFDISSRDSVDVSRIQKGKRREKE 565          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_020793979.1 (activating signal cointegrator 1 complex subunit 2 [Boleophthalmus pectinirostris])

HSP 1 Score: 77.8 bits (190), Expect = 1.600e-10
Identity = 133/568 (23.42%), Postives = 212/568 (37.32%), Query Frame = 0
Query:    6 PTSHPQ-------APFTTLWRTVSIGELPPYLPQDNGCRLEAVVLRIQAKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLTSEDEQQQV---TDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYR----------AVICLSTTGERG-----------NDALEYLADVTGGLSRLVQAVPFTALTLAASPDLFLALRRTYGVLVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGCRQGQGLDTSGIAYLVELLNSS--VGGAQGELTPRGLFMSPHSHRNDKWGEEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTLP----SPM-GIYKHRKKDGGADEVD 536
            P  HP+        P+T      S+ EL  +L Q           R   + L+ LL     +F    +++  +   LD YL  A R  ++           G  S  A+  V +ALHR VF+ +LR+ T ++ ++     + F  +I D  + D+P+++DLC L+G  +  LL H + E  F     S    L EA P +  V E +            AV  +  +  RG           +D L YL D T  +   ++  P  A +   S      L   Y     +S V E   E                  +R+   C R V    L L +  +  ++      ++  E L    +  +  K                           S+  + L      + + L+  +Q    + G R+ +         L  L   S    G  GE  PR       + +N + G +         +EV S++  VR + P LGEGF+ ACL   DYN+ +V+N +LE    P  L +LDR++P     P+  +  HR      DE D
Sbjct:   26 PALHPKRIAERLFLPYTPPPTEGSVAELEQFLEQ----------ARFITEDLEWLLALSHDLFWCQVVFDESLQRCLDSYLQLAPRGSDV----------PGLPSSPALAEVQSALHRAVFMTFLRMATYKESKEHFLTSSAFKEIIYDNFLFDIPKIMDLCVLFGKGNSHLL-HKMIENIFTQ-QPSYYNDLEEAMPTVSQVFESILERCGLQRESAAAVEPMKLSAHRGPDLSSMDQQELSDLLLYLCDSTSTIYAFLEIFP-QACSSFYSHGFLSRLSSFY-----ESAVPE--LEKAARKTTFDDKGLQMELWLRLSHSCRRMVDTVHLLLHHTCLQPILEGGDNIQKCAEELLHNFTSFLPEK-----------RFLCDYNEQFPIVDDISLLQQALPLIDETRTSYLLQGVQSAVDSVGTRRPEAPAQKREDNLWTLTQQSQKALGQPGE-QPRQQEGGQPAAQNSE-GPQRKHVCPLSTAEVDSLLSTVRDLLPDLGEGFLLACLEEYDYNSEVVINNILEERLSP-SLSSLDRSMPRAPSDPLPEVLDHRSNVFDDDEFD 549          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_009641152.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 [Egretta garzetta])

HSP 1 Score: 76.6 bits (187), Expect = 3.500e-10
Identity = 129/552 (23.37%), Postives = 199/552 (36.05%), Query Frame = 0
Query:   47 AKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVTGG------LSRLVQAVPFTALTLAASPDLFLALRRTYGV------LVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGL------------VIRLQKLASAGGCRQGQGLDTSGIAYLVELLNSSVGG-----AQGELTPRGLFMSPHSHRNDKWGEEELRKIGP-------------------QGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTL-----PSPMGIYKHRKKDGGADEVDARDEDFI 543
            A  L  LL      F    +++  +   LD YL HA R F+   D H E           V  +   LHR VFL +LR+ T   S+D     + F  +I +  + D+P++LDLC L+G  +  LL  ++ E  F     S  + L EA P +  V + +                 LE   +VT G      L  +V  +  T  TL A  D+F    +T+        L S  ++A    E                   RI     + +      L+N V        P  E + E +   + + +Q                                   + +  +Q+R  L            V  LQ+ +S         LD +  AY+++ + S+  G     AQ    P     S  +    +   E++ K+G                     G E+ S++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +PY LD LDRT+     P P  +   R      DE D    D +
Sbjct:   63 ADDLNWLLALPHDKFWCQVIFDETLQKCLDSYLCHAPRKFDALLDCHPE-----------VNDMQKCLHRSVFLTFLRMSTHKESKDHFITPSVFGEIIYNNFLFDIPKILDLCVLFGKGNGLLLQKMI-ENIFTQ-QPSYFSDLDEALPTVLQVFDNI---------XXXXXXQKLEEKVNVTPGNMPLQELKDIVLYLCDTCTTLWAFLDVFPLACQTFQKHEFCYRLASFYELAIPELESAIKKRHYEDNSVFADLWRRISHSRKKMI-EAFHILINQV-----CLQPILESSCENIQPFIEEFLQ-----------------------------------IFASVLQERRFLRDYDELFPVEDDVSLLQQASST--------LDETRTAYILQAVESAWEGVDRKKAQVVKDPAPPAASNGASAIAESTAEDMEKLGAAYASEDECAGAAAAPVVKVSGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVPY-LDKLDRTMQRQLKPDPTPLVTSRYNVFQNDEFDVFSRDSV 542          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_018544003.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 [Lates calcarifer])

HSP 1 Score: 76.6 bits (187), Expect = 3.500e-10
Identity = 114/502 (22.71%), Postives = 187/502 (37.25%), Query Frame = 0
Query:   44 RIQAKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLTSEDEQQQVTD---FAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYR--AVICLSTTGERGN--DALEYLADVTGGLSRLVQAVPF---TALTLAASPDLFLALRRTY------GVLVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLAL----LNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLS--DCIQQRNGLVIRLQKLASAGGCRQGQGLDTSGIAYLVELLNSSV---GGAQGELTPRGLFMSPHSHRNDKWGEEELRKIGP-QGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTLPSPM 520
            R   + L+ LL      F    +++  +   LD YL+HA R  +LA             S  AV  +  ++HR VFL +LR+ T ++ ++       F  +I +  + D+P++LDLC L+G  +  LL H + E  F     S    L E  P +  V + +     + C   T       +A +    +T     LV  + +   +  T+ A  D+F A   T+        L S  + A    E                   R+   C + V    L L    L  +++G        EE L+   + L +                                S  ++ + S  D + +R        K +S     QG   +         +    V   GG +       +   P    N          + P  G+E++S++  +R + P LGEGF+ ACL   DYN+ +V+N +LE    P  LD LDR +P P+
Sbjct:   61 RFITEDLEWLLALPHDKFWCQVVFDESLQRCLDSYLHHAPRSLDLA----------ALTSSPAVAEMQRSVHRLVFLTFLRMATHKESKENFLTPAVFGEIIYENFLFDIPKILDLCVLFGKGNGQLL-HKMIENIFTQ-QPSYYNDLEETVPTVLQVFDSVLEKCGLQCEGATAMEPMKLNAHKQPTAMTMSQQDLVDIILYLCDSTTTIHAFLDIFPAACSTFHSHGFLSRLTSFYETAVPDLEKAVRKRNFDDKSLQEDLWKRLSHSCRKMVETAHLLLHHTCLQPILEGRENTPTFAEELLQHFTSFLPEKRFLSDYDEQFPIADDISLLQQALPVIDETRTSYLLQGVESAWDSVGRRKPQSQMRPKASSLLSANQGAAGEAXXXXXXASVKPQKVREPGGGESLRGAEAMLDVPRKGNNG--------AVCPVSGAELESLLSCIRDLLPDLGEGFLLACLEEYDYNSELVINNILEDRLAP-NLDKLDRAMPRPV 541          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_007434852.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Python bivittatus] >XP_015744682.1 PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Python bivittatus])

HSP 1 Score: 76.3 bits (186), Expect = 4.600e-10
Identity = 123/523 (23.52%), Postives = 190/523 (36.33%), Query Frame = 0
Query:   44 RIQAKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGD--SLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVTGG------LSRLVQAVPFTALTLAASPDLFLALRRTYGVLVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGL--IVHAPAHEE--ALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGL------------VIRLQKLASAGGCRQGQGLDTSGIAYLVELLNSSVGGAQ----------------GELT----PRGLFMSPHSHRNDKWGEEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTLPSPM 520
            R  A  L  LL      F    +++  +   LD YL++A R F+  TDL           LA V  +   LHR VFL +LR+ T   S+D     + F  ++ +  + D+P++LDLC L+G  + +LL  ++G     +F    S  + L E  P I  V   +  A              LE    +T G      L  +V  V  + +TL A  D+F    +T+                                  +   FC R       AL   V+  L   +    HE+   L  L+  LS   +   E                               + +  +Q+   L            V  LQ+ +SA        LD +  +Y+++ + S+    +                G+LT      GL      +R +  G          G E+ S++ +V+ + P LGEGFV ACL   +YN   V+N LLE   L   L  LDR +P P+
Sbjct:   60 RFVADDLDWLLALPHDKFWCQVIFDESLQKCLDSYLHYAPRKFDTTTDL-----------LAEVNDLQKHLHRNVFLTFLRMSTHKESKDHFITPSVFGEILYNNFLFDIPKILDLCVLFGKGNGSLLQKMIG----NIFTQQPSYFSDLDETMPTILQVFSNILHACGLQGEGASATPQKLEERVRMTPGGIHLQELKDIVLYVCDSCITLWAFLDIFPLACQTF----------------------------------QKHDFCFRLA-----ALYELVIPELESAIKKRQHEDIRVLSDLWRRLSHSRKKMLEMFHMLVNQLCLQPILESSCDNIQAYIEEFLHIFTSVLQETRFLRDYDELFPVADDVSLLQQASSA--------LDETRTSYILQAVESAWDRTERRRKMVQDPSLSETTDGDLTVPSASEGLENFEEQNRLECAGAAAAPTAPVSGVELDSLISQVKDLLPDLGEGFVLACLEEYNYNVEHVINNLLE-DKLVASLQELDRAMPRPV 519          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_008499729.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Calypte anna])

HSP 1 Score: 76.3 bits (186), Expect = 4.600e-10
Identity = 119/531 (22.41%), Postives = 201/531 (37.85%), Query Frame = 0
Query:   47 AKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVT------GGLSRLVQAVPFTALTLAASPDLFLALRRTYGV------LVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGCR-QGQGLDTSGIAYLVELLNSSVGGAQGELTPRGLFMSPHSHRNDKWG-EEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTL-----PSPMGIYKHRKKDGGADEVDARDEDFIAHQKAYIRQMERD 556
            A  L  LL      F    +++  +   LD YL+HA R F+   D H E           V  +   LHR VFL +LR+ T   S+D     + F  +I +  + D+P++LDLC L+G  +  LL  ++ E  F     S  + L E    +  V  ++                 LE  A+VT        L  +V  +  T+ TL A  D+F    +T+        L S  ++A    E                   RI         R  +  +  ++   +   P  E + E +   + + +Q                         +      ++   S   + R   +++  + A  G  R + QGL+   +A      ++ V     ++   G   +P++  ++  G    + K+   G E+ S++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +P  LD LDR +     P P  +   R      DE D    D +   +    + E+D
Sbjct:   63 ADDLNWLLALPHEKFWCQVVFDETLQKCLDSYLHHAPRKFDALWDCHPE-----------VNDMQRCLHRRVFLTFLRMSTHKESKDHFITPSGFGEIIYNNFLFDIPKILDLCVLFGKGNGPLLQKMI-ENIFTQ-QPSYYSDLDETLHTVLQVFNDILTKCGLQCEGASAEPQRLEERANVTPENMPCQELKDIVLFLCDTSTTLWAFLDVFPLASQTFKKHEFCYRLASFYELAIPELESAIKKRHYEDNSVYADLWRRISH------SRKKMIEIFHILINQVCLQPILESSCENIQPFVEEFLQIFTSVLQERRFLRDYDELFPIEDDVS-----LLQQASSTLDETRTAYILQAVESAWEGADRKKTQGLEDPTLASASHGASAMVESTAEDMEELG---APYASEDECAGAAAPMAKV--SGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVP-SLDKLDRAMQRQLKPDPTPLVTSRSNVFQNDEFDVFSRDSVDISRIQKGKREKD 563          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_015247448.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 [Cyprinodon variegatus] >XP_015247449.1 PREDICTED: activating signal cointegrator 1 complex subunit 2 [Cyprinodon variegatus])

HSP 1 Score: 76.3 bits (186), Expect = 4.600e-10
Identity = 123/547 (22.49%), Postives = 201/547 (36.75%), Query Frame = 0
Query:   31 PQDNGCRLEAVVL----RIQAKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEEL---------------------YRAVICLSTTGERGNDALEYLADVTGGLSRLVQAVPFTALTL--------------AASPDLFLALRRTYGVLVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLA--SAGGCRQGQGLDTSGIAYLVELLNSSVGGAQGELTPRGLFMSP---HSHRNDKWGEEELRKIGPQ-----------GSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTLPSPM 520
            P +NG   E        +  A+ ++ LL      F    +++  +   LD YL+ A R  +LAT               AV  V  A+H+ +FL +LR+ T   S+D       F  +I D  + D+P++LDLC L+G  +  LL H + E  F     +    L E  P +  V + +                      +    +S   E   D + YL D T  +   +   P    +               AA PDL  A+++          + E  W+                   R+   C + V    L L +  +  ++       E  E + T   +L+Q                         A   S+ ++  L    + R   +++  + A  S G  R    + + G    V L++++ G A G       F +P    S    K    E     PQ           G E++S++  +R + P LGEGF+ ACL   DYN+ +V+N +LE    P  L+ LDR +P P+
Sbjct:   44 PPENGSPAEVEEFLEHAKFIAEDMEWLLALPHDKFWCQVVFDESLQKCLDSYLHQAPRGLDLAT----------LPLSPAVADVQRAVHKAIFLTFLRMATHKESKDHFFTPAVFGEIIYDNFLFDIPKILDLCVLFGKGNSQLL-HKMIENIFTQ-QPAYYNDLDETLPTVLQVFDTILDKCGLRCEGATAMEPMKLNAQKQPTAMSMNLEELGDIILYLCDSTTTIHAFLDIFPAACSSFHSHGFLSRLPPFYEAAVPDLEKAIKKRN---FDDKSLQEDLWK-------------------RLSHSCRKIVETSHLLLHHTCLQPIL-------EGQENMQTFAEELLQ----YFTSFLPEKRFLVDYDELFPIADDVSL-LQQALPVIDETRTSYLLQGVESAWDSMGRQRPLGHIQSEG----VSLMSANQGAAGGTAASSDSFRAPELQESREGQKLRGAEAMMNVPQKGNNGAVCPVSGPELESLLSCIRDLLPDLGEGFLLACLQEYDYNSELVINNILEDRLAP-NLEKLDRAMPRPV 539          
BLAST of NO08G02310 vs. NCBI_GenBank
Match: XP_008499727.1 (PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Calypte anna])

HSP 1 Score: 75.9 bits (185), Expect = 6.000e-10
Identity = 117/518 (22.59%), Postives = 196/518 (37.84%), Query Frame = 0
Query:   47 AKALQALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREGEGSLAAVEAVHTALHRYVFLVYLRLLT---SEDEQQQVTDFAALIKDRNVLDLPQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIEELYRAVICLSTTGERGNDALEYLADVT------GGLSRLVQAVPFTALTLAASPDLFLALRRTYGV------LVSKSKVAEGSWEMTXXXXXXXXXXXXXXKQVRIGGFCARFVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEXXXXXXXXXXXXXXXXXXXXAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGCR-QGQGLDTSGIAYLVELLNSSVGGAQGELTPRGLFMSPHSHRNDKWG-EEELRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLEGSALPYPLDTLDRTL-----PSPMGIYKHRKKDGGADEVDARDEDFI 543
            A  L  LL      F    +++  +   LD YL+HA R F+   D H E           V  +   LHR VFL +LR+ T   S+D     + F  +I +  + D+P++LDLC L+G  +  LL  ++ E  F     S  + L E    +  V  ++                 LE  A+VT        L  +V  +  T+ TL A  D+F    +T+        L S  ++A    E                   RI         R  +  +  ++   +   P  E + E +   + + +Q                         +      ++   S   + R   +++  + A  G  R + QGL+   +A      ++ V     ++   G   +P++  ++  G    + K+   G E+ S++ +V+ + P LGEGF+ ACL    YN   V+N +LE   +P  LD LDR +     P P  +   R      DE D    D +
Sbjct:   63 ADDLNWLLALPHEKFWCQVVFDETLQKCLDSYLHHAPRKFDALWDCHPE-----------VNDMQRCLHRRVFLTFLRMSTHKESKDHFITPSGFGEIIYNNFLFDIPKILDLCVLFGKGNGPLLQKMI-ENIFTQ-QPSYYSDLDETLHTVLQVFNDILTKCGLQCEGASAEPQRLEERANVTPENMPCQELKDIVLFLCDTSTTLWAFLDVFPLASQTFKKHEFCYRLASFYELAIPELESAIKKRHYEDNSVYADLWRRISH------SRKKMIEIFHILINQVCLQPILESSCENIQPFVEEFLQIFTSVLQERRFLRDYDELFPIEDDVS-----LLQQASSTLDETRTAYILQAVESAWEGADRKKTQGLEDPTLASASHGASAMVESTAEDMEELG---APYASEDECAGAAAPMAKV--SGVELDSLISQVKDLLPDLGEGFILACLEEYSYNAEQVINNILEDKLVP-SLDKLDRAMQRQLKPDPTPLVTSRSNVFQNDEFDVFSRDSV 550          
The following BLAST results are available for this feature:
BLAST of NO08G02310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26745.11.600e-15647.89activating signal cointegrator 1 complex subunit 2... [more]
KFP19364.15.500e-1122.75Activating signal cointegrator 1 complex subunit 2... [more]
XP_013056662.17.100e-1123.22PREDICTED: activating signal cointegrator 1 comple... [more]
XP_020793979.11.600e-1023.42activating signal cointegrator 1 complex subunit 2... [more]
XP_009641152.13.500e-1023.37PREDICTED: activating signal cointegrator 1 comple... [more]
XP_018544003.13.500e-1022.71PREDICTED: activating signal cointegrator 1 comple... [more]
XP_007434852.14.600e-1023.52PREDICTED: activating signal cointegrator 1 comple... [more]
XP_008499729.14.600e-1022.41PREDICTED: activating signal cointegrator 1 comple... [more]
XP_015247448.14.600e-1022.49PREDICTED: activating signal cointegrator 1 comple... [more]
XP_008499727.16.000e-1022.59PREDICTED: activating signal cointegrator 1 comple... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008802NSK008802Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02310.1NO08G02310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100001g137gene3831Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02310.1NO08G02310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02310 ID=NO08G02310|Name=NO08G02310|organism=Nannochloropsis oceanica|type=gene|length=2774bp
TTAACCACCCCACCATCACCCCAACACCATCAAGCAAAAGCGTTACGCAC
GCATCCCGGCCCCACATTCAACTACAGGAGGAATAGGCATATTTTCCTTT
AACGAGTGGCCCGTAGAAAATGGACTGAAAAGCTAGCTGCAGCCATCGCA
CCGTGCCGCACGCGGCGTTTGACACATCATCGCGTATAGCCTTAATTAAG
CAAGGGGGTAAACCAAGAAGAAGATGGCATCCCAGCCGCCCACCTCTCAC
CCTCAGGCTCCATTCACCACCTTATGGCGGACTGTATCGATTGGGGAGCT
ACCGCCGTACCTGCCGCAGGACAATGGCTGCCGGCTGGAGGCGGTTGTCT
TGAGGATTCAGGCAAAGGCCTTGCAGGCGTTGCTGCAGACCAAGTTTCCC
ATGTTTGCCAGCCACACACTCTACAATCCCCAGGTGGGTGTTTTCCTTGA
TGGCTACCTCAATCATGCCCGTCGTCCGTTTGAGCTAGCCACGGATCTTC
ATGCCGAGATGCATAGGGAGGGAGAGGGCTCGTTGGCGGCTGTAGAGGCC
GTGCATACAGCGTTACATCGCTATGTTTTCCTGGTCTACCTTCGGCTTTT
GACCAGCGAAGACGAGCAGCAACAAGTGACGGATTTTGCCGCGTTGATCA
AGGATCGTAATGTGCTAGATCTTCCCCAGGTGTTGGACCTGTGCAATTTG
TACGGCTTCACAGACCCGGCCTTACTGACGCACCTCTTGGGGGAAGGGGC
CTTCCGCCTGTTTGGAGATAGCCTCCTCACCCAGCTTGCGGAGGCCTGCC
CCATCATTCAAGATGTAATTGAAGAACTATATCGCGCGGTGATATGTTTG
TCCACGACAGGTGAGAGGGGAAATGATGCACTTGAGTACCTGGCGGACGT
GACAGGAGGCTTGAGCAGGTTAGTCCAGGCAGTGCCTTTCACGGCCCTCA
CACTCGCCGCGTCGCCAGACCTCTTCCTCGCCCTCCGCCGGACCTACGGG
GTCCTGGTGTCAAAAAGCAAAGTGGCGGAGGGAAGCTGGGAAATGACCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGGACAAGCAGGTGA
GAATAGGAGGTTTCTGCGCGCGCTTTGTGTGTCGATGCAGCCTTGCCTTG
CTGAATGCCGTTGTGGACGGCCTGATTGTTCACGCCCCCGCGCACGAAGA
GGCTTTGGAAGCCCTCTTTACCATGCTCAGCCAGCTTGTGCAAGCCAAAG
GGGAAGAGGAGGGAGGGAAAGAAGAAGAAAGAGAAGAAAAAGGAAAGGAA
GAGGATGACCGACAGGCAGCACATGGCAAAAGTATCACCATCAGATGCCT
ATTGTCCGACTGCATCCAGCAACGAAATGGGCTAGTGATCCGCCTGCAGA
AGTTGGCTTCGGCGGGCGGATGTCGGCAAGGACAGGGCCTCGACACGTCC
GGCATCGCGTACCTGGTGGAGCTGCTGAACAGTAGTGTGGGTGGGGCACA
GGGTGAGTTGACGCCACGGGGGCTGTTCATGAGCCCACATTCCCACCGGA
ATGATAAGTGGGGAGAGGAGGAGCTGCGGAAGATCGGACCCCAAGGATCG
GAAGTCAAAAGCATGGTCCAGGAGGTGCGGCAAGTGTGTCCCGGCCTGGG
GGAAGGTTTCGTGCACGCCTGCCTGGCCGTGATGGACTACAATACCAACA
TGGTGGTTAACGCCCTGCTGGAGGGCAGCGCTTTGCCCTACCCTCTCGAC
ACGCTGGACCGGACACTGCCTTCGCCGATGGGTATTTACAAGCATCGGAA
GAAGGACGGCGGGGCGGACGAGGTTGATGCGCGCGACGAAGACTTCATCG
CCCACCAGAAGGCCTACATCCGGCAGATGGAGCGGGATGCGGAAGATAAC
GCCTTTCTGCTGCAGGAATATGATGACGACTTTGACGACCAGTTTCAAGC
CGAGGGTGTGATCTTCTCCCGCGATATGGCCCGGGAGGACTTTGAGTCTG
TCAGGAAGTACAATAATTTGGTAAAGAAGGAGGAGGAGGAGGATCGCTTC
TGGAAAGAGATGCGGTTGGAGCAGCCGGATCTTCCCGAGGTGGAAGATGA
TGAAAACGATGATAAAAGCGAGGAAGGACAAGAAAATTCAAAGCCAGGAG
GAGGGTTCGACGCGGACCGTAGTGGCCGGCCACAGGGAGGAGGAGGTGGA
AAAGGAGGGACTGCTAGGGTGCGAGGGGGAGGGGATGAAGAAAGAGGAAG
TGGAGGAAGGGGAGGGGGAAGAAGAAGATATGATAGTGGTGGTTTAGAAA
GCGGTGGGGAGAGAGGAGGAAGAGGTGTTGGAGCTGGAACTACAGGCACA
GGAAGGGACACGGGGCCGCTGAGTGCGCTGGCAAGACGGAGAAAGGAGAA
ACAAAAACACCTGCGGGCCAACCACAATCGGAAAAACCAGGCGGCGCGCA
AAGCGGTTGGATGAAGCGAGCATGGGGATGATGCGAAATGACCGAGCAAA
TGCATGTGTAAAAAAAGTAAAACAAAAAAGGAAAAAGAAACGCAAATTGA
TGAAAGACGCAGATTGTGCGCGAGGTGGTGTGTGTTCGCATTCAGCCTAA
GAGGAGCAGCAGGAGCAGCAGAGCAGGGTATCAACAGTCCAGCAGCACCC
GCCCTACTTATGATGACGTTTGAAAAAAGAACTACTTATGATGACGTTTG
ATTTTGATGACCCTCGGCTCGTTGGCTTGGTCATGCCGATATTCGGACCT
CGTCAGCCCTCCCAAGGGATAGCA
back to top

protein sequence of NO08G02310.1

>NO08G02310.1-protein ID=NO08G02310.1-protein|Name=NO08G02310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=747bp
MASQPPTSHPQAPFTTLWRTVSIGELPPYLPQDNGCRLEAVVLRIQAKAL
QALLQTKFPMFASHTLYNPQVGVFLDGYLNHARRPFELATDLHAEMHREG
EGSLAAVEAVHTALHRYVFLVYLRLLTSEDEQQQVTDFAALIKDRNVLDL
PQVLDLCNLYGFTDPALLTHLLGEGAFRLFGDSLLTQLAEACPIIQDVIE
ELYRAVICLSTTGERGNDALEYLADVTGGLSRLVQAVPFTALTLAASPDL
FLALRRTYGVLVSKSKVAEGSWEMTSSSSSSSSSSSRRDKQVRIGGFCAR
FVCRCSLALLNAVVDGLIVHAPAHEEALEALFTMLSQLVQAKGEEEGGKE
EEREEKGKEEDDRQAAHGKSITIRCLLSDCIQQRNGLVIRLQKLASAGGC
RQGQGLDTSGIAYLVELLNSSVGGAQGELTPRGLFMSPHSHRNDKWGEEE
LRKIGPQGSEVKSMVQEVRQVCPGLGEGFVHACLAVMDYNTNMVVNALLE
GSALPYPLDTLDRTLPSPMGIYKHRKKDGGADEVDARDEDFIAHQKAYIR
QMERDAEDNAFLLQEYDDDFDDQFQAEGVIFSRDMAREDFESVRKYNNLV
KKEEEEDRFWKEMRLEQPDLPEVEDDENDDKSEEGQENSKPGGGFDADRS
GRPQGGGGGKGGTARVRGGGDEERGSGGRGGGRRRYDSGGLESGGERGGR
GVGAGTTGTGRDTGPLSALARRRKEKQKHLRANHNRKNQAARKAVG*
back to top
Synonyms
Publications