NO08G02110, NO08G02110 (gene) Nannochloropsis oceanica

Overview
NameNO08G02110
Unique NameNO08G02110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1299
Alignment locationchr8:624131..625429 -

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Properties
Property NameValue
DescriptionCilia- and flagella-associated protein 20
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:624131..625429 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007714CFA20/WDR90/C3orf67
Homology
BLAST of NO08G02110 vs. NCBI_GenBank
Match: OLP82110.1 (UPF0468 protein C16orf80-like [Symbiodinium microadriaticum])

HSP 1 Score: 333.6 bits (854), Expect = 6.100e-88
Identity = 153/191 (80.10%), Postives = 178/191 (93.19%), Query Frame = 0
Query:    6 TNMFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPISQ 197
            TNMF NTYQ+GFLSI YSIGSKPLQIWD  V+NG+IKR+TD DIQSSVLEI+G NVSTT+I CPA+ SKTLGIKLP+L++++KNL KYFTFEVT+LDD+ +RRRFRAS +QS TRVKPFICTMPMRLD+GWNQIQFNL+DFTRRAYGTNY+ETLRVQ+HANCR+RRIYFSDRLY+EEELP EFK+FLP++Q
Sbjct:  804 TNMFKNTYQSGFLSILYSIGSKPLQIWDKKVRNGHIKRLTDSDIQSSVLEIMGTNVSTTYITCPADPSKTLGIKLPFLVMIIKNLKKYFTFEVTVLDDKEVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYIETLRVQLHANCRIRRIYFSDRLYSEEELPPEFKLFLPVAQ 994          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: CBJ27915.1 (Flagellar Associated Protein [Ectocarpus siliculosus])

HSP 1 Score: 332.4 bits (851), Expect = 1.400e-87
Identity = 154/191 (80.63%), Postives = 177/191 (92.67%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPISQHE 199
            MF NT+Q+GFLSI YSIGSKPLQIWD  V+NG+IKRITD+DIQSSVLEIVG NVSTTFI CPA+  KTLGIKLP+L+++LKNL KYFTFEV +LDD+N+RRRFRAS +QS TRVKPFICTMPMRLD+GWNQIQFNL+DFTRRAYGTNY+ETLRVQ+HANCR+RRIYFSDRLY+EEELP EFK+FLPI++ E
Sbjct:    1 MFRNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDQDIQSSVLEIVGTNVSTTFITCPADAGKTLGIKLPFLVMILKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRIYFSDRLYSEEELPPEFKLFLPITKQE 191          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: XP_019762447.1 (PREDICTED: cilia- and flagella-associated protein 20 [Dendroctonus ponderosae] >AEE61473.1 unknown [Dendroctonus ponderosae] >ENN75735.1 hypothetical protein YQE_07695, partial [Dendroctonus ponderosae] >ERL87024.1 hypothetical protein D910_04426 [Dendroctonus ponderosae])

HSP 1 Score: 332.4 bits (851), Expect = 1.400e-87
Identity = 155/187 (82.89%), Postives = 175/187 (93.58%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPI 195
            MF NT+Q+GFLSI YSIGSKPLQIWD  V+NG+IKRITDEDIQS VLEIVGCNVSTT+I CPA+  KTLGIKLPYL++++KNL KYFTFEV ILDD+N+RRRFRAS +QS TRVKPFICTMPMRLD+GWNQIQFN+ADFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY+E+ELPAEFK+FLPI
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVKNGHIKRITDEDIQSLVLEIVGCNVSTTYITCPADPRKTLGIKLPYLVMIVKNLKKYFTFEVQILDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNVADFTRRAYGTNYVETLRVQVHANCRIRRVYFSDRLYSEDELPAEFKLFLPI 187          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: XP_975505.1 (PREDICTED: cilia- and flagella-associated protein 20 [Tribolium castaneum])

HSP 1 Score: 332.0 bits (850), Expect = 1.800e-87
Identity = 154/187 (82.35%), Postives = 175/187 (93.58%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPI 195
            MF NT+Q+GFLSI YSIGSKPLQIWD  V+NG+IKRITDEDIQS VLE+VGCNVSTT+I CPA+  KTLGIKLPYL++++KNL KYFTFEV ILDD+N+RRRFRAS +QS TRVKPFICTMPMRLD+GWNQIQFN+ADFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY+E+ELPAEFK+FLPI
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVKNGHIKRITDEDIQSLVLEVVGCNVSTTYITCPADPRKTLGIKLPYLVMIVKNLKKYFTFEVQILDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNVADFTRRAYGTNYVETLRVQVHANCRIRRVYFSDRLYSEDELPAEFKLFLPI 187          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: KRT84168.1 (hypothetical protein AMK59_1471 [Oryctes borbonicus])

HSP 1 Score: 332.0 bits (850), Expect = 1.800e-87
Identity = 154/187 (82.35%), Postives = 175/187 (93.58%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPI 195
            MF NT+Q+GFLSI YSIGSKPLQIWD  V+NG+IKRITDEDIQS VLE+VGCNVSTT+I CPA+  KTLGIKLP+L++++KNL KYFTFEV ILDD+N+RRRFRAS +QS TRVKPFICTMPMRLDDGWNQIQFN+ADFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY+E+ELPAEFK+FLPI
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVKNGHIKRITDEDIQSLVLEVVGCNVSTTYITCPADPRKTLGIKLPFLVMIVKNLKKYFTFEVQILDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNVADFTRRAYGTNYVETLRVQVHANCRIRRVYFSDRLYSEDELPAEFKLFLPI 187          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: KYB29171.1 (Choline O-acetyltransferase-like Protein [Tribolium castaneum])

HSP 1 Score: 332.0 bits (850), Expect = 1.800e-87
Identity = 154/187 (82.35%), Postives = 175/187 (93.58%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPI 195
            MF NT+Q+GFLSI YSIGSKPLQIWD  V+NG+IKRITDEDIQS VLE+VGCNVSTT+I CPA+  KTLGIKLPYL++++KNL KYFTFEV ILDD+N+RRRFRAS +QS TRVKPFICTMPMRLD+GWNQIQFN+ADFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY+E+ELPAEFK+FLPI
Sbjct:  665 MFKNTFQSGFLSILYSIGSKPLQIWDKKVKNGHIKRITDEDIQSLVLEVVGCNVSTTYITCPADPRKTLGIKLPYLVMIVKNLKKYFTFEVQILDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQIQFNVADFTRRAYGTNYVETLRVQVHANCRIRRVYFSDRLYSEDELPAEFKLFLPI 851          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: XP_001564754.2 (conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] >CAM38824.2 conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904])

HSP 1 Score: 331.6 bits (849), Expect = 2.300e-87
Identity = 154/189 (81.48%), Postives = 176/189 (93.12%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPISQ 197
            MFHN+YQAGFLSI YSIGSKPLQIWDS V+NG++KRITDEDIQSSVLEI+G NVST +I CPA   +TLGIKLP+L++++KN+ KYF+FEVTILDD+NIRRRFRAS +QS T+VKPFICTMPMRLD+GWNQIQFNL+DFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY EEELP EFK+FLPISQ
Sbjct:    1 MFHNSYQAGFLSILYSIGSKPLQIWDSQVRNGHVKRITDEDIQSSVLEIMGSNVSTCYITCPANPKQTLGIKLPFLVMIIKNMKKYFSFEVTILDDKNIRRRFRASNYQSTTKVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQVHANCRIRRLYFSDRLYAEEELPPEFKLFLPISQ 189          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: KPI89544.1 (hypothetical protein ABL78_1312 [Leptomonas seymouri])

HSP 1 Score: 330.5 bits (846), Expect = 5.200e-87
Identity = 152/191 (79.58%), Postives = 177/191 (92.67%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPISQHE 199
            MFHN+YQAGFLSI YSIGSKPLQIWDS V+NG++KRITDEDIQSSVLEIVG NVST +I CPA   +TLGIKLP+L++++KN+ KYF+FEVT+LDD+N+RRRFRAS +QS T+VKPFICTMPMRLD+GWNQIQFNL+DFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY EEELP EFK+FLPI+Q +
Sbjct:    1 MFHNSYQAGFLSILYSIGSKPLQIWDSKVRNGHVKRITDEDIQSSVLEIVGSNVSTCYITCPANPKQTLGIKLPFLVMIIKNMKKYFSFEVTVLDDKNMRRRFRASNYQSTTKVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQVHANCRIRRLYFSDRLYAEEELPPEFKLFLPIAQQQ 191          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: XP_022905314.1 (cilia- and flagella-associated protein 20 [Onthophagus taurus])

HSP 1 Score: 330.5 bits (846), Expect = 5.200e-87
Identity = 151/187 (80.75%), Postives = 174/187 (93.05%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPI 195
            MF NT+Q+GFLSI YSIGSKPLQIWD  V+NG+IKRITDEDIQS VLE++GCNVSTT+I CPA+  KTLGIKLPYL++++KNL KYFTFEV ILDD+N+RRRFRAS +QS TRVKPFICTMPMRLD+GWNQ+QFN+ADFTRRAYGTNY+ETLRVQVHANCR+RR+YFSDRLY E+ELPAEFK+FLPI
Sbjct:    1 MFKNTFQSGFLSILYSIGSKPLQIWDKKVKNGHIKRITDEDIQSLVLEVIGCNVSTTYITCPADPRKTLGIKLPYLVMIVKNLKKYFTFEVQILDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDEGWNQVQFNVADFTRRAYGTNYIETLRVQVHANCRIRRVYFSDRLYAEDELPAEFKLFLPI 187          
BLAST of NO08G02110 vs. NCBI_GenBank
Match: XP_010698829.1 (hypothetical protein LPMP_210410 [Leishmania panamensis] >AIN98122.1 hypothetical protein LPMP_210410 [Leishmania panamensis] >CCM15384.1 hypothetical protein, conserved [Leishmania guyanensis])

HSP 1 Score: 329.7 bits (844), Expect = 8.900e-87
Identity = 153/189 (80.95%), Postives = 176/189 (93.12%), Query Frame = 0
Query:    8 MFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQSSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTILDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRAYGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPISQ 197
            MFH++YQAGFLSI YSIGSKPLQIWDS V+NG++KRITDEDIQSSVLEI+G NVST +I CPA   +TLGIKLP+L++++KN+ KYF+FEVTILDD+NIRRRFRAS +QS T+VKPFICTMPMRLD+GWNQIQFNL+DFTRRAYGTNYVETLRVQVHANCR+RR+YFSDRLY EEELP EFK+FLPISQ
Sbjct:    1 MFHSSYQAGFLSILYSIGSKPLQIWDSQVRNGHVKRITDEDIQSSVLEIMGSNVSTCYITCPANPKQTLGIKLPFLVMIIKNMKKYFSFEVTILDDKNIRRRFRASNYQSTTKVKPFICTMPMRLDEGWNQIQFNLSDFTRRAYGTNYVETLRVQVHANCRIRRLYFSDRLYAEEELPPEFKLFLPISQ 189          
The following BLAST results are available for this feature:
BLAST of NO08G02110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OLP82110.16.100e-8880.10UPF0468 protein C16orf80-like [Symbiodinium microa... [more]
CBJ27915.11.400e-8780.63Flagellar Associated Protein [Ectocarpus siliculos... [more]
XP_019762447.11.400e-8782.89PREDICTED: cilia- and flagella-associated protein ... [more]
XP_975505.11.800e-8782.35PREDICTED: cilia- and flagella-associated protein ... [more]
KRT84168.11.800e-8782.35hypothetical protein AMK59_1471 [Oryctes borbonicu... [more]
KYB29171.11.800e-8782.35Choline O-acetyltransferase-like Protein [Triboliu... [more]
XP_001564754.22.300e-8781.48conserved hypothetical protein [Leishmania brazili... [more]
KPI89544.15.200e-8779.58hypothetical protein ABL78_1312 [Leptomonas seymou... [more]
XP_022905314.15.200e-8780.75cilia- and flagella-associated protein 20 [Onthoph... [more]
XP_010698829.18.900e-8780.95hypothetical protein LPMP_210410 [Leishmania panam... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G02110.1NO08G02110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552948gene_3539Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G02110.1NO08G02110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G02110 ID=NO08G02110|Name=NO08G02110|organism=Nannochloropsis oceanica|type=gene|length=1299bp
ATGCTCAAGTATAATTCATACAGATCTTCAAAAACGTGGGTTGTTTTGCT
CACTGGGAAGCCTTGTAATATGTCTCTTTCTTTACTTCTCTCTAAACTTG
CCCTCTCTCTGGACAACCTGCGTAGCACGCCTCTTGCGGCCCCCCTTTCC
CTCCGCTTGACGACTCTACTATTTCGACGCGAAAAGCACGCCATTTCGTT
GTCTGCTGCAATGCCACAAATCCTCTAATTGGTATCTTATGATCTTACAG
TCTTACAGGCCACGTCTTGGAACACTAAGTCTTCGTCTGTCAAAATCAGC
GTCGCCTCCGCCATGGTCCCTCTCTCCACCAATATGTTCCATAACACGTA
CCAAGCGGGCTTCCTGTCCATTTTCTACTCAATTGGAAGCAAGCCCTTGC
AGATATGGGATTCCTCGGTACAAAACGGGTACATTAAGCGCATTACGGAT
GAGGACATCCAGTCGTCCGTGCTGGAAATTGTGGGATGCAACGTCTCCAC
TACTTTCATTCAGTGCCCGGCCGAGAAGAGCAAGACGCTGGGCATTAAGC
TGCCATACCTCATGATCGTCCTTAAAAATgtacgtttttgaatgacaaaa
taactgtttgttgttataccagtattattgtggctctttcccgctcataa
gcttcaaaaatagacttcttttcataaatattcgacacccgaatccacct
ccgtccaacagCTGAACAAGTACTTCACCTTCGAAGTGACCATCCTAGAC
GACCAGAACATCCGCCGCCGTTTCCGAGCTTCTACCTTCCAGTCCTGCAC
GCGCGTTAAGCCTTTCATCTGCACTATGCCCATGCGCCTCGACGACGGCT
GGAACCAAATTCAATTTAACCTTGCCGACTTCACCCGACGCGCCTACGGG
ACCAACTACGTCGAGACGCTGCGTGTGCAAGTCCATGCGAACTGTCGCCT
CCGTCGAATCTACTTCTCTGACCGCCTATACACCGAGGAGGAGCTCCCAG
CTGAGTTCAAGGTCTTCCTTCCCATCTCCCAGCACGAAAAGGCAGCTATG
GCGGCAGCGGCGGCGGCCCTGAAAAAGGATAGGGCAGGGCGAGCTATTGA
GCAGCAGCAGCAGCAGCAACAACAGCAGCAAGAGGAGGAGGAGGAAAAGG
ACGAGAAAAAGATGGTGGTGCCGGCAGCAGTGGAGGCAATCAAGTTGCTG
CATCGGCTGGTCGGGCAGCAGGGTGAGGGAGAGCTGGTGGAGCAGTTTGG
GGGTAAGAATGGGGAGGATGCGATTCCTGTCCCTGCAGGAGGCGTGTAA
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protein sequence of NO08G02110.1

>NO08G02110.1-protein ID=NO08G02110.1-protein|Name=NO08G02110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bp
MVPLSTNMFHNTYQAGFLSIFYSIGSKPLQIWDSSVQNGYIKRITDEDIQ
SSVLEIVGCNVSTTFIQCPAEKSKTLGIKLPYLMIVLKNLNKYFTFEVTI
LDDQNIRRRFRASTFQSCTRVKPFICTMPMRLDDGWNQIQFNLADFTRRA
YGTNYVETLRVQVHANCRLRRIYFSDRLYTEEELPAEFKVFLPISQHEKA
AMAAAAAALKKDRAGRAIEQQQQQQQQQQEEEEEKDEKKMVVPAAVEAIK
LLHRLVGQQGEGELVEQFGGKNGEDAIPVPAGGV*
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Synonyms
Publications