NO08G02060, NO08G02060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G02060 vs. NCBI_GenBank
Match: XP_005856013.1 (hypothetical protein NGA_2076900 [Nannochloropsis gaditana CCMP526] >EKU20350.1 hypothetical protein NGA_2076900 [Nannochloropsis gaditana CCMP526] >EWM26702.1 hypothetical protein Naga_100001g111 [Nannochloropsis gaditana]) HSP 1 Score: 547.4 bits (1409), Expect = 5.000e-152 Identity = 299/478 (62.55%), Postives = 371/478 (77.62%), Query Frame = 0 Query: 44 ENEEQNMTTLEYIRDNLEDLQEXXQEGVRGVNDRAARARKRALDLHERWSDAMDDAVDDVREYLGLEKPVLNRVEDRLELVLKRTDFARYV-MKGGVGLGMVFFGLHFSHLVVFMHTLRVTGLPVIQRAWWEFLEMYAVARQTIKKEYPNMAQTKKLLQAVHFEIRSTRKILHEAAEAAKDGTVTKAEAREAVRKAKINLRELNEKSWLLNQAFSSMHAMAAAVDFRRIKDLAGGIYTSALACFATASSSTLRGLSIGFDLASLISGHIDNAIRALTKRMHRLEVFRYLPKETQKLLGLTVSLVSVVKGLIVVHFVVPRLTLAVSSSALGALWITDTIMYVTDAGAGRTGKGPMNDNGLFLLSNLFWTAAGFAFQTKRAGEEMPRFFRILFYPVLCLEKFLHSLDEVLGSSRDKIEQLITKRKHSSLTQGECVAAGGVAGATLLQAAEAGAKLDEREGSYER-RGRGGFLGVITRFWQ 520 E E MTT E RD++E+ E QEG+ V +RA + +++A L E+++D +D+A DVREYLGLEKP L ++EDR+ VL++T FAR V +KG VGL MV +G+HFSHLVVF+HTLRVTGLPV+QRAW EF++MY AR+TIK+EYPNM TKKLLQAVH+EI+STRK+LHE+AEAAKDG VT++EAREAVRKAK+NLRELNEKSW+LNQAFSSMHA+AAA+DF +IKDL GIYTSALACFATASSSTLRGLSIGFDLASLIS HID+A++A+ +R+ RLEV +YLP+ETQKLLG+TVSLVSV+KGLIVVHFVVPRLTL +SSSALGALW+TD ++ V DAGA G G +ND L+LLSN FWTA G +Q+ R G++MPR ++L +P + LE L SLD LGSSR+KIE L+ +KH+ + G + A A L EA +EG+ R R RGG L FW+ Sbjct: 50 EETEGAMTTFELFRDSMEEFNEDFQEGIHLVRERALQVKEQAFKLQEKFTDIVDEATLDVREYLGLEKPYLEQLEDRMLNVLQKTAFARQVIVKGCVGLSMVLYGMHFSHLVVFIHTLRVTGLPVMQRAWNEFVDMYGTARRTIKREYPNMLHTKKLLQAVHYEIQSTRKLLHESAEAAKDGKVTESEAREAVRKAKLNLRELNEKSWILNQAFSSMHAVAAAIDFVKIKDLFSGIYTSALACFATASSSTLRGLSIGFDLASLISQHIDHAVQAVAERIPRLEVLQYLPRETQKLLGMTVSLVSVLKGLIVVHFVVPRLTLVISSSALGALWVTDMLVDVMDAGADGPGTGLLNDKCLYLLSNFFWTAVGCMYQSHREGQDMPRLIQVLLFPAVRLETLLCSLDNFLGSSREKIEYLV--KKHTPFS-GNAMEAQETAHTPSLAVQEA------KEGNTARERKRGGLL----HFWK 514
BLAST of NO08G02060 vs. NCBI_GenBank
Match: EWM26662.1 (hypothetical protein Naga_100001g33 [Nannochloropsis gaditana]) HSP 1 Score: 189.5 bits (480), Expect = 2.600e-44 Identity = 104/321 (32.40%), Postives = 182/321 (56.70%), Query Frame = 0 Query: 130 FARYVMKGGVGLGMVFFGLHFSHLVVFMHTLRVTGLPVIQRAWWEFLEMYAVARQTIKKEYPNMAQTKKLLQAVHFEIRSTRKILHEAAEAAKDGTVTKAEAREAVRKAKINLRELNEKSWLLNQAFSSMHAMAAAVDFRRIKDLAGGIYTSALACFATASSSTLRGLSIGFDLASLISGHIDNAIRALTKRMHRLEVFRYLPKETQKLLGLTVSLVSVVKGLIVVHFVVPRLTLAVSSSALGALWITDTIMYVTDAG-AGRTGKGPMNDNGLFLLSNLFWTAAGFAFQTKRAGEEMPRFFRILFYPVLCLEKFLHSLDEV 450 F K G M FG H++ V HT+RVTG P +A E Y+ AR+ +K E + + +L +AV +E++S ++ E+ + +DG +++ EA E +R+A+I+ + L ++W LNQA S+ A+ AA+D R+++ G+YT ALACFA++SS T+ LS+ FDL +++ ++ L R H E+ R LP ET++ + L+ ++ ++GL++V+ V+P+++L +SS+ALGA W+TD I + D G PM ++ + + + T G+ Q ++P + P+ EK L+ L+ + Sbjct: 145 FVSTAAKALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPETRRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICDPWIQAHDGWNPMANHLPYAVLQVGLTIGGYYVQKTVYPGKIPLIVERVLSPLAFFEKRLNYLNSM 465 The following BLAST results are available for this feature:
BLAST of NO08G02060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G02060 ID=NO08G02060|Name=NO08G02060|organism=Nannochloropsis oceanica|type=gene|length=1581bpback to top protein sequence of NO08G02060.1 >NO08G02060.1-protein ID=NO08G02060.1-protein|Name=NO08G02060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bpback to top Synonyms
Publications
|