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Properties
Property Name | Value |
Description | Epidermal growth factor-like domain protein |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:574420..577144 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
Term | Definition |
IPR000742 | EG-like_dom |
Vocabulary: Cellular Component
Term | Definition |
GO:0016021 | integral component of membrane |
GO:0016020 | membrane |
Homology
BLAST of NO08G01900 vs. NCBI_GenBank
Match: EWM26708.1 (Epidermal growth factor-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 300.8 bits (769), Expect = 1.200e-77 Identity = 169/297 (56.90%), Postives = 198/297 (66.67%), Query Frame = 0
Query: 472 CDPQITCNGHGKCNEDGSCRCYPPYTGSACLRDACLDIWDCNECVGSNLGCYFSDGECRGDGLISPEESTCRPAWLASVMAYMQFAFLFGVVLLVAGGMVWRSRRASMVAGGREGGLGGFIRMPTAGGGPEGEGENWHWDPEEDSVELLKQSGXXXXXXXXXXXXXXXXXXGIYALIR--PSSKSSPVRSXXXXXXXXXXXXTSAGLGAGVTSRRDSGGRKELQSGEDLFAELGMEAQPQFNLKR---QNDAGPPGQQMSCTRSSRLSAAGTSPVKGGSTGGEGLAPGWMDDEDLDI 764
CD TCNGHGKC +DGSCRC+PPYTG +CLRDACLDIWDCNECVGS+LGCYFS+GECRGDGL+S EESTCRPAWLA+ ++Y+QF FGVVL+VAG +VWRSRRA GR G GF+R+PTA GPEG GE+W+WDPEED+VELLK G GIYAL R P+S + P +S S+ + + RR S G EL S +DLFAELGMEAQP F LK + G TRSSRLSAAG SPVK + G G PGW+DD+DLD+
Sbjct: 398 CDDLETCNGHGKCEKDGSCRCFPPYTGHSCLRDACLDIWDCNECVGSSLGCYFSEGECRGDGLMSREESTCRPAWLATALSYLQFGVFFGVVLMVAGCLVWRSRRAGF--DGRSG--TGFVRIPTA--GPEG-GEDWNWDPEEDNVELLKPRG-EGEKDDVGAPTAQSTKTGIYALFRSSPASAAPPRKS-------------SSAVAGEIALRRVSEGH-ELPSADDLFAELGMEAQPHFTLKMAKFEEREADSGHSSRGTRSSRLSAAGCSPVKSSTGGAPG--PGWVDDDDLDM 670
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01900 ID=NO08G01900|Name=NO08G01900|organism=Nannochloropsis oceanica|type=gene|length=2725bp TCATACAACACACCGCACTTGCCCCAACTCAGGCATTGGACCAAATCCAA GTACCATGCCGATTGGATTCAAACTTCTGGCGATGCTTGTCCTCTGCACT TTTTTCTTAATCGTCAGCGGGAGGACCAACGTTTTAAGGGGCGGCAGCAG CAGGGAGCTCAGAAGGGACACCAAGACCACTCTTGCTGGCGACAAGGGCA GCGCTAACGCCAATAAAATGGAAGTGACCATCGATAAGAAGAAGAAGAAG GGCGCAGGTGCGGTGGCCGAGCCGGTGGAATCAGTCCCCACAGAAAAAGG CCCGAAGGAGGGCAAGGCTGATATGGTCGAGAAGGATGACGAGTACGATG CTGATATGGATGATGACAACATGATTGACGGGCTTGAAGAGGGGGAAGGG AAAGATGTTGATGAGGACGAAGATGAGGGGAAAGAGCCGACCTCGGAGAA AAACGAAGAAGCGGACAAAGAGCCAAGCGACCCTGCGACTGCTACGGCTT TGGAGGACGGACGAGAGGGCAAGGAGAGTGACGCAACGGCGGAAGGGATG GATGAAACCAAGGATGCTGCTGACGACAAGGGAGAGGTGAAGGAGGAAGG AGACGAGGAGCAGGATGATGAGTCCAAACAGGGCAAGATGGGCTTGCTTC ATGAAGCCACCACCACCAAGGGTGAGACAGCACCTGTCGCTGAAGCTGAA ATAGGCACCGACACAGACAAGACCACCAGCGGCACAGGCGAGAGCAAGAA GGGTATCAGCGATGAAGTGAAGGAGGTGGATGGGAATGCTGCTGCTACTA CCGCTTCTGAGGCTGTTGCTGAGAGTTCCAAATCTAAAAGTGGGCCGCCG AAGTTGGAAGACGCGGAAGATGACAAGGACACGAAAGCGGACGCCGCTGC TGCTGACGCCTCTTCTGCCCTAGCTGAGGGCGCTGGTGAGACTAATGAGA AAGATGTTGTTGGCGAGGCTGACGTTGGACCAGCAGACAGCAGCAGCAGC AGCAGCAGCAGCAACGATAAGAAGAAGAGCGTTGCCGAGGAAGAAATTAC TGCTACCACCGCGACGGACGAAGGAAAGGAAAACACCGACAATAAGGCTG ATGAAAATAAAGAAGGAAAGGCCGAGGCAAGCGAAAGAAAGAGAAATGGC GAAGCTGCAGGACCAGAGAAAAAAGAGAAGGGGGTAGACAGCGCCACAGT CGAAAAACCCACCGATGATGGCAAGGTGCCAGCCGCGCCCGACTCAGACT ATTCTAATGTCCCCGACCCTGCATCTGCAGAGCAGGAGAAGCAGCAACAG AAACGGGAGCAGGATCAGCAGCAGCAGGAGCAGCATCAGCAGCAGCAGCA GCAGCAGCCGCAACAGCAAGTGGAGGTGACGGAGGTGAAAGAGGTCAAGG AAGGGGATGTTGCTCCTGTGATATCTGAATCAAGCACCGCCACAGGCACT GCTGGTACTGGTGATGCATGCGATCCGCAGATCACGTGTAACGGGCATGG AAAGTGCAACGAGGATGGGAGCTGTCGTTGTTATCCTCCCTACACAGGGA GTGCGTGCTTGCGCGATGCATGCTTGGACATTTGGGACTGCAACGAGTGC GTTGGCTCTAACTTGGGCTGTTACTTCTCTGACGGCGAGTGTCGCGGGGA TGGATTGATAAGTCCTGAAGAAAGCACGTGCCGCCCGGCGTGGCTGGCAT CGGTGATGGCGTACATGCAATTTGCGTTTCTGTTTGGGGTGGTGTTGTTG GTGGCGGGGGGGATGGTCTGGCGGAGTCGACGCGCGAGCATGGTGGCTGG AGGGAGGGAGGGAGGGCTCGGGGGGTTTATACGGATGCCAACGGCTGGGG GAGGCCCGGAGGGAGAAGGGGAGAATTGGCATTGGGACCCTGAAGAGGAT AGTGTGGAGCTGTTGAAGCAGTCGGGGGAGGAGGGAGGGAGGGAGGGAGG GAGGGAGGGGCAGGAGGGGGGGAAGGGAAAGGGGATTTATGCGTTGATTC GTCCGTCTTCGAAAAGCTCGCCTGTAAGATCGCAGCAGCAGGAGGAAGAG AAGATGCAACAGCATCAGACGAGTGCAGGGTTGGGAGCTGGGGTGACGTC GAGGCGGGATTCAGGAGGGAGAAAGGAGCTTCAGTCTGGAGAGGATTTGT TCGCCGAACTGGGCATGGAGGCGCAGCCGCAGTTTAACTTGAAGAGGCAG AATGACGCAGGGCCGCCCGGGCAGCAAATGAGTTGCACGCGGAGCAGTCG GTTATCGGCGGCGGGGACGAGTCCGGTGAAGGGAGGGAGTACAGGAGGAG AGGGGTTGGCACCTGGCTGGATGGATGATGAGGATTTAGATATTTAGTCA TGCGTAACAGACAAGAATGTTAACACGCAAGAGCGAAAAGGAGGGAGGAC AAGACCAGCAAGGTGAGAGTTTTGCTCGAGGAGTGGTGGAGGACGAAGCA GACGGGACGAATGGCAAAGGTCAACGGAAGGAGGGGGCGAATTAAATGAA TTTGTGTAGTTAGGAAGTCCTCTGAGGAGACGCGCGAGTAAAGAAAAAGC CGGATCTACATTAATGTGCAGGAAGGAAGAAACAAAAAAGTAGAGCTCCC TGTTGTGATAATAGCAGTAGCCCCTCCCCACGACCCACATAAAGGAGCAC ATGGACGGGAACGGCCAAAAAAACGACGAGAAGAGCGTTAAAAAACCAAC TTTACTCGTCCTCTTCCAGAGAAGC back to topprotein sequence of NO08G01900.1 >NO08G01900.1-protein ID=NO08G01900.1-protein|Name=NO08G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=764bp MPIGFKLLAMLVLCTFFLIVSGRTNVLRGGSSRELRRDTKTTLAGDKGSA NANKMEVTIDKKKKKGAGAVAEPVESVPTEKGPKEGKADMVEKDDEYDAD MDDDNMIDGLEEGEGKDVDEDEDEGKEPTSEKNEEADKEPSDPATATALE DGREGKESDATAEGMDETKDAADDKGEVKEEGDEEQDDESKQGKMGLLHE ATTTKGETAPVAEAEIGTDTDKTTSGTGESKKGISDEVKEVDGNAAATTA SEAVAESSKSKSGPPKLEDAEDDKDTKADAAAADASSALAEGAGETNEKD VVGEADVGPADSSSSSSSSNDKKKSVAEEEITATTATDEGKENTDNKADE NKEGKAEASERKRNGEAAGPEKKEKGVDSATVEKPTDDGKVPAAPDSDYS NVPDPASAEQEKQQQKREQDQQQQEQHQQQQQQQPQQQVEVTEVKEVKEG DVAPVISESSTATGTAGTGDACDPQITCNGHGKCNEDGSCRCYPPYTGSA CLRDACLDIWDCNECVGSNLGCYFSDGECRGDGLISPEESTCRPAWLASV MAYMQFAFLFGVVLLVAGGMVWRSRRASMVAGGREGGLGGFIRMPTAGGG PEGEGENWHWDPEEDSVELLKQSGEEGGREGGREGQEGGKGKGIYALIRP SSKSSPVRSQQQEEEKMQQHQTSAGLGAGVTSRRDSGGRKELQSGEDLFA ELGMEAQPQFNLKRQNDAGPPGQQMSCTRSSRLSAAGTSPVKGGSTGGEG LAPGWMDDEDLDI* back to top
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