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Properties
| Property Name | Value |
|---|
| Description | Epidermal growth factor-like domain protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr8 | genome | chr8:574420..577144 - |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000742 | EG-like_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Homology
BLAST of NO08G01900 vs. NCBI_GenBank
Match: EWM26708.1 (Epidermal growth factor-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 300.8 bits (769), Expect = 1.200e-77 Identity = 169/297 (56.90%), Postives = 198/297 (66.67%), Query Frame = 0
Query: 472 CDPQITCNGHGKCNEDGSCRCYPPYTGSACLRDACLDIWDCNECVGSNLGCYFSDGECRGDGLISPEESTCRPAWLASVMAYMQFAFLFGVVLLVAGGMVWRSRRASMVAGGREGGLGGFIRMPTAGGGPEGEGENWHWDPEEDSVELLKQSGXXXXXXXXXXXXXXXXXXGIYALIR--PSSKSSPVRSXXXXXXXXXXXXTSAGLGAGVTSRRDSGGRKELQSGEDLFAELGMEAQPQFNLKR---QNDAGPPGQQMSCTRSSRLSAAGTSPVKGGSTGGEGLAPGWMDDEDLDI 764
CD TCNGHGKC +DGSCRC+PPYTG +CLRDACLDIWDCNECVGS+LGCYFS+GECRGDGL+S EESTCRPAWLA+ ++Y+QF FGVVL+VAG +VWRSRRA GR G GF+R+PTA GPEG GE+W+WDPEED+VELLK G GIYAL R P+S + P +S S+ + + RR S G EL S +DLFAELGMEAQP F LK + G TRSSRLSAAG SPVK + G G PGW+DD+DLD+
Sbjct: 398 CDDLETCNGHGKCEKDGSCRCFPPYTGHSCLRDACLDIWDCNECVGSSLGCYFSEGECRGDGLMSREESTCRPAWLATALSYLQFGVFFGVVLMVAGCLVWRSRRAGF--DGRSG--TGFVRIPTA--GPEG-GEDWNWDPEEDNVELLKPRG-EGEKDDVGAPTAQSTKTGIYALFRSSPASAAPPRKS-------------SSAVAGEIALRRVSEGH-ELPSADDLFAELGMEAQPHFTLKMAKFEEREADSGHSSRGTRSSRLSAAGCSPVKSSTGGAPG--PGWVDDDDLDM 670
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01900 ID=NO08G01900|Name=NO08G01900|organism=Nannochloropsis oceanica|type=gene|length=2725bp
TCATACAACACACCGCACTTGCCCCAACTCAGGCATTGGACCAAATCCAA
GTACCATGCCGATTGGATTCAAACTTCTGGCGATGCTTGTCCTCTGCACT
TTTTTCTTAATCGTCAGCGGGAGGACCAACGTTTTAAGGGGCGGCAGCAG
CAGGGAGCTCAGAAGGGACACCAAGACCACTCTTGCTGGCGACAAGGGCA
GCGCTAACGCCAATAAAATGGAAGTGACCATCGATAAGAAGAAGAAGAAG
GGCGCAGGTGCGGTGGCCGAGCCGGTGGAATCAGTCCCCACAGAAAAAGG
CCCGAAGGAGGGCAAGGCTGATATGGTCGAGAAGGATGACGAGTACGATG
CTGATATGGATGATGACAACATGATTGACGGGCTTGAAGAGGGGGAAGGG
AAAGATGTTGATGAGGACGAAGATGAGGGGAAAGAGCCGACCTCGGAGAA
AAACGAAGAAGCGGACAAAGAGCCAAGCGACCCTGCGACTGCTACGGCTT
TGGAGGACGGACGAGAGGGCAAGGAGAGTGACGCAACGGCGGAAGGGATG
GATGAAACCAAGGATGCTGCTGACGACAAGGGAGAGGTGAAGGAGGAAGG
AGACGAGGAGCAGGATGATGAGTCCAAACAGGGCAAGATGGGCTTGCTTC
ATGAAGCCACCACCACCAAGGGTGAGACAGCACCTGTCGCTGAAGCTGAA
ATAGGCACCGACACAGACAAGACCACCAGCGGCACAGGCGAGAGCAAGAA
GGGTATCAGCGATGAAGTGAAGGAGGTGGATGGGAATGCTGCTGCTACTA
CCGCTTCTGAGGCTGTTGCTGAGAGTTCCAAATCTAAAAGTGGGCCGCCG
AAGTTGGAAGACGCGGAAGATGACAAGGACACGAAAGCGGACGCCGCTGC
TGCTGACGCCTCTTCTGCCCTAGCTGAGGGCGCTGGTGAGACTAATGAGA
AAGATGTTGTTGGCGAGGCTGACGTTGGACCAGCAGACAGCAGCAGCAGC
AGCAGCAGCAGCAACGATAAGAAGAAGAGCGTTGCCGAGGAAGAAATTAC
TGCTACCACCGCGACGGACGAAGGAAAGGAAAACACCGACAATAAGGCTG
ATGAAAATAAAGAAGGAAAGGCCGAGGCAAGCGAAAGAAAGAGAAATGGC
GAAGCTGCAGGACCAGAGAAAAAAGAGAAGGGGGTAGACAGCGCCACAGT
CGAAAAACCCACCGATGATGGCAAGGTGCCAGCCGCGCCCGACTCAGACT
ATTCTAATGTCCCCGACCCTGCATCTGCAGAGCAGGAGAAGCAGCAACAG
AAACGGGAGCAGGATCAGCAGCAGCAGGAGCAGCATCAGCAGCAGCAGCA
GCAGCAGCCGCAACAGCAAGTGGAGGTGACGGAGGTGAAAGAGGTCAAGG
AAGGGGATGTTGCTCCTGTGATATCTGAATCAAGCACCGCCACAGGCACT
GCTGGTACTGGTGATGCATGCGATCCGCAGATCACGTGTAACGGGCATGG
AAAGTGCAACGAGGATGGGAGCTGTCGTTGTTATCCTCCCTACACAGGGA
GTGCGTGCTTGCGCGATGCATGCTTGGACATTTGGGACTGCAACGAGTGC
GTTGGCTCTAACTTGGGCTGTTACTTCTCTGACGGCGAGTGTCGCGGGGA
TGGATTGATAAGTCCTGAAGAAAGCACGTGCCGCCCGGCGTGGCTGGCAT
CGGTGATGGCGTACATGCAATTTGCGTTTCTGTTTGGGGTGGTGTTGTTG
GTGGCGGGGGGGATGGTCTGGCGGAGTCGACGCGCGAGCATGGTGGCTGG
AGGGAGGGAGGGAGGGCTCGGGGGGTTTATACGGATGCCAACGGCTGGGG
GAGGCCCGGAGGGAGAAGGGGAGAATTGGCATTGGGACCCTGAAGAGGAT
AGTGTGGAGCTGTTGAAGCAGTCGGGGGAGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGGCAGGAGGGGGGGAAGGGAAAGGGGATTTATGCGTTGATTC
GTCCGTCTTCGAAAAGCTCGCCTGTAAGATCGCAGCAGCAGGAGGAAGAG
AAGATGCAACAGCATCAGACGAGTGCAGGGTTGGGAGCTGGGGTGACGTC
GAGGCGGGATTCAGGAGGGAGAAAGGAGCTTCAGTCTGGAGAGGATTTGT
TCGCCGAACTGGGCATGGAGGCGCAGCCGCAGTTTAACTTGAAGAGGCAG
AATGACGCAGGGCCGCCCGGGCAGCAAATGAGTTGCACGCGGAGCAGTCG
GTTATCGGCGGCGGGGACGAGTCCGGTGAAGGGAGGGAGTACAGGAGGAG
AGGGGTTGGCACCTGGCTGGATGGATGATGAGGATTTAGATATTTAGTCA
TGCGTAACAGACAAGAATGTTAACACGCAAGAGCGAAAAGGAGGGAGGAC
AAGACCAGCAAGGTGAGAGTTTTGCTCGAGGAGTGGTGGAGGACGAAGCA
GACGGGACGAATGGCAAAGGTCAACGGAAGGAGGGGGCGAATTAAATGAA
TTTGTGTAGTTAGGAAGTCCTCTGAGGAGACGCGCGAGTAAAGAAAAAGC
CGGATCTACATTAATGTGCAGGAAGGAAGAAACAAAAAAGTAGAGCTCCC
TGTTGTGATAATAGCAGTAGCCCCTCCCCACGACCCACATAAAGGAGCAC
ATGGACGGGAACGGCCAAAAAAACGACGAGAAGAGCGTTAAAAAACCAAC
TTTACTCGTCCTCTTCCAGAGAAGC back to topprotein sequence of NO08G01900.1 >NO08G01900.1-protein ID=NO08G01900.1-protein|Name=NO08G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=764bp
MPIGFKLLAMLVLCTFFLIVSGRTNVLRGGSSRELRRDTKTTLAGDKGSA
NANKMEVTIDKKKKKGAGAVAEPVESVPTEKGPKEGKADMVEKDDEYDAD
MDDDNMIDGLEEGEGKDVDEDEDEGKEPTSEKNEEADKEPSDPATATALE
DGREGKESDATAEGMDETKDAADDKGEVKEEGDEEQDDESKQGKMGLLHE
ATTTKGETAPVAEAEIGTDTDKTTSGTGESKKGISDEVKEVDGNAAATTA
SEAVAESSKSKSGPPKLEDAEDDKDTKADAAAADASSALAEGAGETNEKD
VVGEADVGPADSSSSSSSSNDKKKSVAEEEITATTATDEGKENTDNKADE
NKEGKAEASERKRNGEAAGPEKKEKGVDSATVEKPTDDGKVPAAPDSDYS
NVPDPASAEQEKQQQKREQDQQQQEQHQQQQQQQPQQQVEVTEVKEVKEG
DVAPVISESSTATGTAGTGDACDPQITCNGHGKCNEDGSCRCYPPYTGSA
CLRDACLDIWDCNECVGSNLGCYFSDGECRGDGLISPEESTCRPAWLASV
MAYMQFAFLFGVVLLVAGGMVWRSRRASMVAGGREGGLGGFIRMPTAGGG
PEGEGENWHWDPEEDSVELLKQSGEEGGREGGREGQEGGKGKGIYALIRP
SSKSSPVRSQQQEEEKMQQHQTSAGLGAGVTSRRDSGGRKELQSGEDLFA
ELGMEAQPQFNLKRQNDAGPPGQQMSCTRSSRLSAAGTSPVKGGSTGGEG
LAPGWMDDEDLDI* back to top
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