NO08G01880, NO08G01880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01880 vs. NCBI_GenBank
Match: EWM26717.1 (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana]) HSP 1 Score: 429.5 bits (1103), Expect = 9.000e-117 Identity = 211/306 (68.95%), Postives = 253/306 (82.68%), Query Frame = 0 Query: 1 MDAPLLDRAASDSMLPRFSTLGMQNSILISGRMGRLQESDRIMAFTDATLAIVCTSCAVPLWANGTHNFNPVRLVPFVTSFFILVRLWEKHCQDFIRLEHIDEKLPHVNVLWIASLSLLPFSFVVLFVPTTTNGHLIYLGLWAVVLLLVGGTSYMLSASARRLSALQPCDREYQGWVGRDKTLGISLFQVGLVIVAASLIAWEEHLDILSDDYLRAFRPGHVRAAAVVWVVGLFVFWGAMAGRMNFRLLQLWLGKESPVLFEGAVPRVRVEIFSDGVYAASATGLMVELLNGLLHTQEGRKDGGGR 307 M+ PLL R+ SDS LP + GMQ SIL+SGRMGRLQ+SDRIMAFTDA LAI+CTSCAVPLW+NGT NFNPVRLVPFVT+FFIL RLWE HCQDF RLEH+DEKLP +NVLWIAS++LLPF FV+LFVP T GHL+YLGLWA VLLLVG S+ LS++ +RLSAL+ +E +GW RD L ++LFQVGLV ASL+A EHLDIL+DDY +AFRPGH+R AAV++VVG+ ++W +A R+NFR+LQ+WLG S VLF GAVPRVRVEIFSDGVYAA+ATGLM+E+L+GLL EG + GGG+ Sbjct: 1 MNEPLLQRSNSDSALPTLGSWGMQ-SILVSGRMGRLQDSDRIMAFTDAILAIICTSCAVPLWSNGTRNFNPVRLVPFVTTFFILSRLWEIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQ 305
BLAST of NO08G01880 vs. NCBI_GenBank
Match: EWM26716.1 (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana]) HSP 1 Score: 295.0 bits (754), Expect = 2.700e-76 Identity = 143/218 (65.60%), Postives = 177/218 (81.19%), Query Frame = 0 Query: 89 EKHCQDFIRLEHIDEKLPHVNVLWIASLSLLPFSFVVLFVPTTTNGHLIYLGLWAVVLLLVGGTSYMLSASARRLSALQPCDREYQGWVGRDKTLGISLFQVGLVIVAASLIAWEEHLDILSDDYLRAFRPGHVRAAAVVWVVGLFVFWGAMAGRMNFRLLQLWLGKESPVLFEGAVPRVRVEIFSDGVYAASATGLMVELLNGLLHTQEGRKDGGGR 307 E HCQDF RLEH+DEKLP +NVLWIAS++LLPF FV+LFVP T GHL+YLGLWA VLLLVG S+ LS++ +RLSAL+ +E +GW RD L ++LFQVGLV ASL+A EHLDIL+DDY +AFRPGH+R AAV++VVG+ ++W +A R+NFR+LQ+WLG S VLF GAVPRVRVEIFSDGVYAA+ATGLM+E+L+GLL EG + GGG+ Sbjct: 9 EIHCQDFCRLEHVDEKLPQINVLWIASMTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQ 226
BLAST of NO08G01880 vs. NCBI_GenBank
Match: EWM26718.1 (hypothetical protein Naga_100001g94 [Nannochloropsis gaditana]) HSP 1 Score: 245.4 bits (625), Expect = 2.400e-61 Identity = 121/191 (63.35%), Postives = 153/191 (80.10%), Query Frame = 0 Query: 116 LSLLPFSFVVLFVPTTTNGHLIYLGLWAVVLLLVGGTSYMLSASARRLSALQPCDREYQGWVGRDKTLGISLFQVGLVIVAASLIAWEEHLDILSDDYLRAFRPGHVRAAAVVWVVGLFVFWGAMAGRMNFRLLQLWLGKESPVLFEGAVPRVRVEIFSDGVYAASATGLMVELLNGLLHTQEGRKDGGGR 307 ++LLPF FV+LFVP T GHL+YLGLWA VLLLVG S+ LS++ +RLSAL+ +E +GW RD L ++LFQVGLV ASL+A EHLDIL+DDY +AFRPGH+R AAV++VVG+ ++W +A R+NFR+LQ+WLG S VLF GAVPRVRVEIFSDGVYAA+ATGLM+E+L+GLL EG + GGG+ Sbjct: 1 MTLLPFHFVILFVPATATGHLLYLGLWACVLLLVGVASHWLSSATQRLSALRLGVQEKKGWQQRDLALTLALFQVGLVTAGASLLARVEHLDILTDDYKKAFRPGHIRVAAVLFVVGVLIYWLCLALRINFRILQMWLGPRSAVLFNGAVPRVRVEIFSDGVYAAAATGLMIEVLSGLLRADEGAEGGGGQ 191 The following BLAST results are available for this feature:
BLAST of NO08G01880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01880 ID=NO08G01880|Name=NO08G01880|organism=Nannochloropsis oceanica|type=gene|length=1359bpback to top protein sequence of NO08G01880.1 >NO08G01880.1-protein ID=NO08G01880.1-protein|Name=NO08G01880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=313bpback to top Synonyms
Publications
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