NO08G01830, NO08G01830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PON58695.1 (violaxanthin de-epoxidase-like protein [Parasponia andersonii]) HSP 1 Score: 375.6 bits (963), Expect = 3.400e-100 Identity = 202/464 (43.53%), Postives = 275/464 (59.27%), Query Frame = 0 Query: 184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 PV +V +V G+G L++ PW EVM H +R+++V + + V T+ D S L++ DIL +N +Q I + +++ +S P L K + FW L + + + + TV WER +SDDI +C+LV+INA + +P + L+ F L CM CG QI++C +P C+ AL CL +C P DQVC YRCI YES E F+LC+LQK+NCL A IP P PI FRGE L HE+AE++ G LGG L WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRV+R KVPGTFY++VLDNGV S+EFW I DA +D+SW LF+YSGAA AGQSYTGA+L SP G +P+ E + R+++AL++ GIKEWEL+ V++ S PL I Sbjct: 80 PVRIVALV-GHGTLSPLKSTPWEEVMLHAAKRLKWVDEGYEMLVFTD------------DFGESNSENALNVKRVLSNADILVIVGVENQESVTWVQSNIGNINNIICFESSPGLENKLGGSYVENESKGSSFWGQL---KKSNQTVEVVRTVSEAWERHNSDDIRFCILVIINAYIRPVPILKN-LRSKGFSTLNCMAKKCGSQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPSLEAFSLCVLQKNNCLGLDAKIPERPYIPPIAKFRGEDLRHEVAEDVFVGWLGG----LGWSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVKTLEGKMVWRRRKYRVKRGKVPGTFYFSVLDNGVVSNEFWTIADAPDDLSWGLFHYSGAARVAGQSYTGAVLVSPDGAYPS---EVERRRLVSALEKCGIKEWELYNVDNCSCVDPPLGI 518
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_004237473.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Solanum lycopersicum]) HSP 1 Score: 374.0 bits (959), Expect = 9.800e-100 Identity = 207/469 (44.14%), Postives = 281/469 (59.91%), Query Frame = 0 Query: 184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSS-LNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKT--RIGPARPYGPLAGFWKALPLPTERK--RLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 PV +V +V G G+ L++ PW +VM H R+++V F + V +D V + E A S+ L+H DIL +Q VP+++ DS L K + G + F LP +K + + TV WER +SDDI +C+LV+INA + + + L+ F L CM+TNCG QI++C +P C+ AL CL +C P DQVC YRCI YES E+F+LC+LQK+NCL A IP P P+ FRGEKL+ E+AE++ G LG L+ WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +G VWRRR YRV+R KV GTF+++VLDNGV S+EFW I+D ++D+SW LF+Y GAA AGQSYTGA+L SP G++PA E K R+++ALD GIKEWELF V++ S E APL I Sbjct: 71 PVRIVGIV-GEGSVSPLKSTPWLDVMLHTAERLKWVDEEFEMIV-------------FSDNFVKSEDETANHVSNELDHADILVVVAVTKEGSVNWIQSNSLNVPNIICFDSSMELRNKLGGSFVETKKRGDI--FSSLLPFSQSKKLDESVEITRTVFDAWERHNSDDIRFCLLVIINAYITPVSTLKN-LRAKGFSTLNCMVTNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESKYLEEFSLCVLQKNNCLELDAKIPEKPYVTPMAEFRGEKLSSEIAEDLLVGWLGTLE----WSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVRTLEGDLVWRRRKYRVKRGKVTGTFHFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGAARVAGQSYTGAVLVSPDGQYPA---EKEKQRLISALDSCGIKEWELFNVDNCSCENAPLGI 514
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_015073809.1 (PREDICTED: uncharacterized protein LOC107017997 [Solanum pennellii]) HSP 1 Score: 374.0 bits (959), Expect = 9.800e-100 Identity = 208/469 (44.35%), Postives = 282/469 (60.13%), Query Frame = 0 Query: 184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSS-LNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKT--RIGPARPYGPLAGFWKALPLPTERK--RLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 PV +V +V G G+ L++ PW +VM H R+++V F + V +D V + E A S+ L+H DIL + +Q VP+++ DS L K + G + F LP +K + + +TV WER +SDDI +C+LV+INA + + A+ L+ F L CM+TNCG QI++C +P C+ AL CL +C P DQVC YRCI YES E+F+LC+LQK+NCL A IP P P+ FRGEKL+ E+AE++ G LG L+ WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T G VWRRR YRV+R KV GTF+++VLDNGV S+EFW I+D +D+SW LF+Y GAA AGQSYTGA+L SP G++PA E K R+++ALD GIKEWELF V++ S E APL I Sbjct: 74 PVRIVGIV-GEGSVSPLKSTPWLDVMLHTAERLKWVDEEFEMIV-------------FSDNFVKSEDETANHVSNELDHADILVVVAVRKEGSVNWIQSNSQNVPNIICFDSSMELRNKLGGSFVETKKRGDI--FSSLLPFSQSKKLDESVEITQTVFDAWERHNSDDIRFCLLVIINAYITPVSALKN-LRAKGFSTLNCMVTNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESKYLEEFSLCVLQKNNCLELDAKIPEKPYVTPMAEFRGEKLSSEIAEDLFVGWLGTLE----WSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVRTLLGDLVWRRRKYRVKRGKVTGTFHFSVLDNGVVSNEFWTIVDVCDDLSWGLFHYHGAARVAGQSYTGAVLVSPDGQYPA---EKEKQRLISALDSCGIKEWELFNVDNCSCENAPLGI 517
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PRW45412.1 (violaxanthin de- chloroplastic [Chlorella sorokiniana]) HSP 1 Score: 374.0 bits (959), Expect = 9.800e-100 Identity = 213/512 (41.60%), Postives = 294/512 (57.42%), Query Frame = 0 Query: 154 TVLAASASSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGAR--GTL--EAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPL----PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKP--VTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHL-----------GGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQ-KGK-ALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLE 643 T+L A S +++P+ P+ +H+ V P A G+ +A W EV++H +R+ + PAFSL L A L + E + ++L H +P A L +A P LA+ S L TR+G +P P AG AL + + TV+ ++RG SDD L+ LV+ N+ + ++PAV+ K LQCM+ CG QI C + +CKAAL CL +C NDQVC YRCI YES + E+F+LCI+QKHNC A IPM PDPAP+ F+G+ +THE+AE++ G L GG ++LP+SW+V +G N AYDFFP Q+ +Y+ KG+ +WY PVF+V T DG+ VWRRR YRV+R ++PGTF ++VLDNGVTS+EFWR++D E + W +FYYSGAA+ AG SY+GAILAS +G+WPA E + RI ALD AGIK WEL V++ GAPL+ Sbjct: 57 TLLGQHARSRGSSVAPAAAVPPSATEAPAGSIHLAVVAPLQQASPFGSFGRQASWHEVLQHTAQRLAWQDPAFSL-----------TLHDSAALGGGSDAERSALQAALQHSAAALAIGVTDPTAAQALAPLLAAAPTALAVGSHAALASATRLGGRQPAQPAAGGLAALLAKLFPDKQANEDQQVLHTVEELFKRGTSDDFLFIFLVLANSYVKEVPAVAMSFKQKNAGLPELQCMIGKCGAQIFSCVTDTSCKAALDCLSACDFNDQVCSYRCITSYESRKLEEFSLCIIQKHNCFGLNADIPMVPDPAPMASFKGQPMTHELAEDLFIGWLQDPSTALAPLRGG--EQLPYSWRVFAGKNAAYDFFPCQNQLFYRGKGRGGMWYDPVFQVKTIDGRTVWRRRHYRVKRDRLPGTFRFSVLDNGVTSNEFWRVLDCEEGLDWCVFYYSGAASRAGLSYSGAILASKSGDWPASQEA--RARIQQALDSAGIKMWELSNVDNSGCAGAPLD 553
BLAST of NO08G01830 vs. NCBI_GenBank
Match: GAQ90490.1 (hypothetical protein KFL_006470020 [Klebsormidium nitens]) HSP 1 Score: 373.6 bits (958), Expect = 1.300e-99 Identity = 206/452 (45.58%), Postives = 276/452 (61.06%), Query Frame = 0 Query: 203 PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPA--RPYGPLAGFWKALPL-PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHL--GGLQQ--KLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFD-GKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 PWT VM HM +R+ + PAF +HVV + DL P+P+S A P I+ + A+ + A+ ++ALD P + R+G + P LAG LP P +R L T+ W R +DD+L+ +L++++A + +P ++ L+ LQ M T CG QI C + +CK AL CL +CPPNDQVC YRCIV YES E F+LC+LQKHNCL A P P P+ FRG+ LTH AE+I G L QQ +L WSW+V++GVN AYD FP Q+ +Y +GKA LWY PVF+V D G+ VWRRR YRVRR PGTFY++VLDNGVTS+E+WRI+D +D+SW LFYY+GAAAAAGQ+Y+GA+L +P G+WP +E R+ AALD AGIK WEL++V++ S +GAPL+I Sbjct: 120 PWTAVMAHMAQRLLWTDPAFVMHVVRDTDL----------PPIPSSQGSA--------PPIVVVVGVHDDAVGQRVVQRYAEALTLMALDCGPAVEAAVRLGGSFQHPRSALAGLLAKLPWGPAAARRQLA--ATIGSAWGRNRADDVLFGLLLLVDAFVRPVPQLAG-LRAQDLGTLQKMATKCGPQIWACLTDASCKQALDCLNACPPNDQVCSYRCIVTYESPLLEAFSLCVLQKHNCLGLHAEPPALPAVQPMAAFRGQPLTHTAAEDIFVGWLRDPARQQAGRLAWSWRVVAGVNAAYDSFPCQYQLFY-RGKARNSLWYDPVFKVQKLDSGEVVWRRRHYRVRRGDAPGTFYFSVLDNGVTSNEYWRIVDCPDDLSWALFYYAGAAAAAGQAYSGAVLVTPDGDWPGKEQEE---RLCAALDAAGIKLWELYRVDNKSCDGAPLDI 546
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_010261049.1 (PREDICTED: uncharacterized protein LOC104599974 isoform X1 [Nelumbo nucifera]) HSP 1 Score: 372.9 bits (956), Expect = 2.200e-99 Identity = 204/470 (43.40%), Postives = 286/470 (60.85%), Query Frame = 0 Query: 180 GPSKPVHVVTVVPGNGARGTLE-APWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAG--FWKALPL--PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 G S PV +V +V G G+ L+ PW EVM H R++++ F + +V +++LT+ +D P E +K L+H DIL N +Q V +++ DS P L K +G + + + G F K + + + +TV W+R +SDDI +C+LV+INA + +P + L+ L CM+ NCG QI++C +P C+ AL CL C P DQVC Y+CI YES + E F+LC+LQKHNCL A IP P P+ FRGE L HE+AE++ G LG L WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRVRR K+PGTFY++VLDNGV S+E+W I+D AED+SW LF+YSGAA AG +YTGA+L SP G++ P E +P++++AL ++GIKEWEL+ V++ S PL Sbjct: 87 GQSTPVRIVGIV-GEGSVSPLKCTPWEEVMLHTVDRLKWIDEGFQM-LVFSDNILTQ-----SDDP---RVEALKK--ELSHADILVVVAVNNQESVKWIQTSGESVRNIICFDSSPTLINK--LGGSYIHTQVKGNIFTKITGIIQGNNTNESVEVVQTVSEAWDRYNSDDIRFCLLVIINAYIRPVPILKN-LRSKGLSTLNCMIKNCGPQILNCLLDPNCRKALQCLNRCSPVDQVCNYQCIASYESPQLEAFSLCVLQKHNCLELDARIPDKPYVPPMVQFRGEDLCHEVAEDLFVGWLGSLD----WSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVRTLEGKIVWRRRRYRVRRGKIPGTFYFSVLDNGVVSNEYWTIVDVAEDLSWGLFHYSGAAQVAGLAYTGAVLVSPNGQY---PNEMQRPQLISALKKSGIKEWELYTVDNRSCPDPPL 533
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PON85654.1 (violaxanthin de-epoxidase-like protein [Trema orientalis]) HSP 1 Score: 372.9 bits (956), Expect = 2.200e-99 Identity = 199/464 (42.89%), Postives = 275/464 (59.27%), Query Frame = 0 Query: 184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 PV +V +V G+G L++ PW EVM H +R+++V + + V T+ D S L++ DIL +N +Q + +++ +S P L K + FW L + + + + TV WER +SDD+ +C+LV+INA + +P + L+ F L CM NCG QI++C +P C+ AL CL +C P DQVC YRCI YES E F+LC+LQK+NCL A IP P P+ FRGE L HE+AE++ G LGGL WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRV+R KVPGTFY++VLDNGV S+EFW I DA +D+SW LF+YSGAA AGQSYTGA+L SP G +P+ E + R+++AL++ GI+EWEL+ V++ S PL I Sbjct: 84 PVRIVALV-GHGTLSPLKSTPWEEVMLHTAKRLKWVDEGYEMLVFTD------------DFSESNSENALNLERVLSNADILVIVGVENQESVKWVQSNGGNINNIICFESSPGLENKLGGSYVENESKGSNFWGQL---KKSNQTVEVVRTVSEAWERHNSDDLRFCILVIINAYIRPVPILKN-LRSKGFSTLNCMAKNCGNQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPSLEAFSLCVLQKNNCLGLDAKIPERPYVPPMAKFRGEDLRHEVAEDVFVGWLGGLD----WSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVKTLEGKMVWRRRKYRVKRGKVPGTFYFSVLDNGVVSNEFWTIADAPDDLSWGLFHYSGAARVAGQSYTGAVLVSPDGAYPS---EVERRRLVSALEKCGIEEWELYNVDNCSCVDPPLGI 522
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_011021952.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic-like [Populus euphratica]) HSP 1 Score: 372.5 bits (955), Expect = 2.800e-99 Identity = 199/468 (42.52%), Postives = 278/468 (59.40%), Query Frame = 0 Query: 181 PSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAG--FWKALPLPTERKR--LLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGK---ALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 P PV +VT+V APW EVM H +R+++V + + V T++ ++ TE K +L+ DIL + ++ VP+++ DS P L K +G + +G F K + +K + + +TV W+R +SDDI +C+L++INA + +P + L+ F L CM+ NCG QI++C +P C+ AL CL C P DQVC YRCI YES E F+LC+LQK+NCL A IP P P+ FRGE L+HE AE++ G LG L WSW+VI+G NPAYD FP Q+ +Y +GK + WY+PVF+V T +GK VWRRR YRV+R K+PGTFY++VLDNGV S+EFW I+D ++D SW LF+Y+GAA AGQ+YTGA+L SP G A P+E R+ +AL++ GIKEWELF V++ S + PL Sbjct: 74 PDPPVRIVTIVGAGSISPLKRAPWEEVMLHTAQRLKWVDEGYDMLVFTDDLYQSKD-----------QTEILLK--ALSCADILLIVAVTDQESVKWIETESKNVPNIVCFDSSPNLVSK--LGGSYVQNETSGTLFAKTFGISLSKKASDSMDVVQTVSEAWKRHNSDDIRFCLLIIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPDCRKALQCLNKCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKIPEKPFVPPMARFRGEDLSHETAEDLFVGWLGSLD----WSWRVIAGQNPAYDQFPCQYQLFY-RGKVKGSFWYEPVFQVKTLEGKVVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFHYNGAARVAGQAYTGAVLVSPDG---AYPDEKESKRLASALEKCGIKEWELFTVDNCSCQDPPL 517
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_020098700.1 (uncharacterized protein LOC109717362 isoform X2 [Ananas comosus]) HSP 1 Score: 372.5 bits (955), Expect = 2.800e-99 Identity = 202/485 (41.65%), Postives = 281/485 (57.94%), Query Frame = 0 Query: 166 NMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTL-EAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKAL---PLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 N+SP + + ++PV +V VV G G+ L + PW EVM H R+++V F + V T+ +L+ G+ +H L+H ++L N L+ +P+++ +S P L K G F+ L P+ RK + + V WER +SDDI +C+LV+IN+ + +P + L+ + CML NC Q+++C +P C+ AL CL SC P DQVC YRCI YES E F+ C+LQKHNCL A IP P AP++ FRGE L+HE+AE++ G LG + WSW+VI+G NPAYD FP Q+ +Y +GKA Y+PVF+V T D K VWRRR YRVRRA VPGTFY++VLDNGV S EFW I+D ++D++W LF+YSGAA AAG SYTGA+L SP G + P +S R+ +AL+++ IK WEL V++ S PL I Sbjct: 61 NLSPIRSLAAEKRGDAAQPVRIVAVV-GEGSLSPLKDTPWEEVMRHTADRLKWVDEGFEMLVFTDNSVLSDGV------------DHENLRKELSHSNMLVDVAVNNQEAVEWLRENSENIPNIICFESSPALVNKLG-GSCIQLSRKQNFFTKLAEIAKPSNRKESSEVVKAVSDAWERHNSDDIRFCLLVIINSYIKPVPILKN-LRAKGLSTINCMLKNCRSQLLNCLFDPNCRKALQCLNSCSPTDQVCNYRCIASYESPNLEAFSFCVLQKHNCLELDAEIPSKPYVAPLSIFRGEILSHEIAEDLFIGWLGNFE----WSWRVIAGQNPAYDQFPCQYQLFY-RGKAKGSFCYEPVFQVRTLDEKLVWRRRKYRVRRASVPGTFYFSVLDNGVVSKEFWTIVDVSDDLTWGLFHYSGAAQAAGLSYTGAVLVSPDGMY---PPDSESQRVASALEKSSIKSWELHTVDNCSCINPPLGI 522
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_002306359.2 (violaxanthin de-epoxidase, chloroplastic [Populus trichocarpa] >PNT35658.1 hypothetical protein POPTR_005G085800v3 [Populus trichocarpa]) HSP 1 Score: 371.7 bits (953), Expect = 4.800e-99 Identity = 199/468 (42.52%), Postives = 277/468 (59.19%), Query Frame = 0 Query: 181 PSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAG--FWKALPLPTERKR--LLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 P PV +VT+V PW EVM H +R+++V + + V T++ ++ TE K +L+ DIL + ++ VP+++ DS P L K +G + +G F KA + +K + + +TV W+R +SDDI +C+L++INA + +P + L+ F L CM+ NCG QI++C +P C+ AL CL C P DQVC YRCI YES E F+LC+LQK+NCL A IP P P+ FRGE L+HE AE++ G LG L WSW+VI+G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRV+R K+PGTFY++VLDNGV S+E W I+D ++D SW LF+Y+GAA AGQ+YTGA+L SP G A P+E R+ +AL++ GIKEWELF V++ S + PL Sbjct: 74 PDPPVRIVTIVGAGSISPLKRTPWEEVMLHTAKRLKWVDEGYDMLVFTDDLYQSKD-----------QTEILLK--ALSCADILLIVAVTDQESVKWIETESKNVPNIVCFDSSPNLVNK--LGGSYVQNETSGTLFAKAFGISPSKKASDSMDVVQTVSDAWKRHNSDDIRFCLLIIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPDCRKALQCLNKCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKIPEKPFVPPMARFRGEDLSHETAEDLFVGWLGSLD----WSWRVIAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVKTLEGKVVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNECWTIVDVSDDFSWGLFHYNGAARVAGQAYTGAVLVSPDG---AYPDEKESKRLASALEKCGIKEWELFTVDNCSCQDPPL 517 The following BLAST results are available for this feature:
BLAST of NO08G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01830 ID=NO08G01830|Name=NO08G01830|organism=Nannochloropsis oceanica|type=gene|length=4162bpback to top protein sequence of NO08G01830.1 >NO08G01830.1-protein ID=NO08G01830.1-protein|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=679bpback to top Synonyms
Publications
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