NO08G01830, NO08G01830 (gene) Nannochloropsis oceanica

Overview
NameNO08G01830
Unique NameNO08G01830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4162
Alignment locationchr8:558780..562941 +

Link to JBrowse

Properties
Property NameValue
DescriptionViolaxanthin de-epoxidase-related protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:558780..562941 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0009507chloroplast
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PON58695.1 (violaxanthin de-epoxidase-like protein [Parasponia andersonii])

HSP 1 Score: 375.6 bits (963), Expect = 3.400e-100
Identity = 202/464 (43.53%), Postives = 275/464 (59.27%), Query Frame = 0
Query:  184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644
            PV +V +V G+G    L++ PW EVM H  +R+++V   + + V T+            D     S         L++ DIL     +N      +Q  I  + +++  +S P L  K            + FW  L    +  + + +  TV   WER +SDDI +C+LV+INA +  +P +   L+   F  L CM   CG QI++C  +P C+ AL CL +C P DQVC YRCI  YES   E F+LC+LQK+NCL   A IP  P   PI  FRGE L HE+AE++  G LGG    L WSW+V++G NPAYD FP Q+  +Y +GKA    WY+PVF+V T +GK VWRRR YRV+R KVPGTFY++VLDNGV S+EFW I DA +D+SW LF+YSGAA  AGQSYTGA+L SP G +P+   E  + R+++AL++ GIKEWEL+ V++ S    PL I
Sbjct:   80 PVRIVALV-GHGTLSPLKSTPWEEVMLHAAKRLKWVDEGYEMLVFTD------------DFGESNSENALNVKRVLSNADILVIVGVENQESVTWVQSNIGNINNIICFESSPGLENKLGGSYVENESKGSSFWGQL---KKSNQTVEVVRTVSEAWERHNSDDIRFCILVIINAYIRPVPILKN-LRSKGFSTLNCMAKKCGSQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPSLEAFSLCVLQKNNCLGLDAKIPERPYIPPIAKFRGEDLRHEVAEDVFVGWLGG----LGWSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVKTLEGKMVWRRRKYRVKRGKVPGTFYFSVLDNGVVSNEFWTIADAPDDLSWGLFHYSGAARVAGQSYTGAVLVSPDGAYPS---EVERRRLVSALEKCGIKEWELYNVDNCSCVDPPLGI 518          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_004237473.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Solanum lycopersicum])

HSP 1 Score: 374.0 bits (959), Expect = 9.800e-100
Identity = 207/469 (44.14%), Postives = 281/469 (59.91%), Query Frame = 0
Query:  184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSS-LNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKT--RIGPARPYGPLAGFWKALPLPTERK--RLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644
            PV +V +V G G+   L++ PW +VM H   R+++V   F + V              +D  V +  E A   S+ L+H DIL             +Q     VP+++  DS   L  K        +  G +  F   LP    +K    + +  TV   WER +SDDI +C+LV+INA +  +  +   L+   F  L CM+TNCG QI++C  +P C+ AL CL +C P DQVC YRCI  YES   E+F+LC+LQK+NCL   A IP  P   P+  FRGEKL+ E+AE++  G LG L+    WSW+V++G NPAYD FP Q+  +Y +GKA    WY+PVF+V T +G  VWRRR YRV+R KV GTF+++VLDNGV S+EFW I+D ++D+SW LF+Y GAA  AGQSYTGA+L SP G++PA   E  K R+++ALD  GIKEWELF V++ S E APL I
Sbjct:   71 PVRIVGIV-GEGSVSPLKSTPWLDVMLHTAERLKWVDEEFEMIV-------------FSDNFVKSEDETANHVSNELDHADILVVVAVTKEGSVNWIQSNSLNVPNIICFDSSMELRNKLGGSFVETKKRGDI--FSSLLPFSQSKKLDESVEITRTVFDAWERHNSDDIRFCLLVIINAYITPVSTLKN-LRAKGFSTLNCMVTNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESKYLEEFSLCVLQKNNCLELDAKIPEKPYVTPMAEFRGEKLSSEIAEDLLVGWLGTLE----WSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVRTLEGDLVWRRRKYRVKRGKVTGTFHFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGAARVAGQSYTGAVLVSPDGQYPA---EKEKQRLISALDSCGIKEWELFNVDNCSCENAPLGI 514          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_015073809.1 (PREDICTED: uncharacterized protein LOC107017997 [Solanum pennellii])

HSP 1 Score: 374.0 bits (959), Expect = 9.800e-100
Identity = 208/469 (44.35%), Postives = 282/469 (60.13%), Query Frame = 0
Query:  184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSS-LNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKT--RIGPARPYGPLAGFWKALPLPTERK--RLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644
            PV +V +V G G+   L++ PW +VM H   R+++V   F + V              +D  V +  E A   S+ L+H DIL     +       +Q     VP+++  DS   L  K        +  G +  F   LP    +K    + + +TV   WER +SDDI +C+LV+INA +  + A+   L+   F  L CM+TNCG QI++C  +P C+ AL CL +C P DQVC YRCI  YES   E+F+LC+LQK+NCL   A IP  P   P+  FRGEKL+ E+AE++  G LG L+    WSW+V++G NPAYD FP Q+  +Y +GKA    WY+PVF+V T  G  VWRRR YRV+R KV GTF+++VLDNGV S+EFW I+D  +D+SW LF+Y GAA  AGQSYTGA+L SP G++PA   E  K R+++ALD  GIKEWELF V++ S E APL I
Sbjct:   74 PVRIVGIV-GEGSVSPLKSTPWLDVMLHTAERLKWVDEEFEMIV-------------FSDNFVKSEDETANHVSNELDHADILVVVAVRKEGSVNWIQSNSQNVPNIICFDSSMELRNKLGGSFVETKKRGDI--FSSLLPFSQSKKLDESVEITQTVFDAWERHNSDDIRFCLLVIINAYITPVSALKN-LRAKGFSTLNCMVTNCGPQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESKYLEEFSLCVLQKNNCLELDAKIPEKPYVTPMAEFRGEKLSSEIAEDLFVGWLGTLE----WSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVRTLLGDLVWRRRKYRVKRGKVTGTFHFSVLDNGVVSNEFWTIVDVCDDLSWGLFHYHGAARVAGQSYTGAVLVSPDGQYPA---EKEKQRLISALDSCGIKEWELFNVDNCSCENAPLGI 517          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PRW45412.1 (violaxanthin de- chloroplastic [Chlorella sorokiniana])

HSP 1 Score: 374.0 bits (959), Expect = 9.800e-100
Identity = 213/512 (41.60%), Postives = 294/512 (57.42%), Query Frame = 0
Query:  154 TVLAASASSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGAR--GTL--EAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPL----PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKP--VTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHL-----------GGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQ-KGK-ALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLE 643
            T+L   A S   +++P+          P+  +H+  V P   A   G+   +A W EV++H  +R+ +  PAFSL            L   A L   +  E +   ++L H          +P  A  L   +A  P  LA+ S   L   TR+G  +P  P AG   AL        +      +  TV+  ++RG SDD L+  LV+ N+ + ++PAV+   K        LQCM+  CG QI  C  + +CKAAL CL +C  NDQVC YRCI  YES + E+F+LCI+QKHNC    A IPM PDPAP+  F+G+ +THE+AE++  G L           GG  ++LP+SW+V +G N AYDFFP Q+  +Y+ KG+  +WY PVF+V T DG+ VWRRR YRV+R ++PGTF ++VLDNGVTS+EFWR++D  E + W +FYYSGAA+ AG SY+GAILAS +G+WPA  E   + RI  ALD AGIK WEL  V++    GAPL+
Sbjct:   57 TLLGQHARSRGSSVAPAAAVPPSATEAPAGSIHLAVVAPLQQASPFGSFGRQASWHEVLQHTAQRLAWQDPAFSL-----------TLHDSAALGGGSDAERSALQAALQHSAAALAIGVTDPTAAQALAPLLAAAPTALAVGSHAALASATRLGGRQPAQPAAGGLAALLAKLFPDKQANEDQQVLHTVEELFKRGTSDDFLFIFLVLANSYVKEVPAVAMSFKQKNAGLPELQCMIGKCGAQIFSCVTDTSCKAALDCLSACDFNDQVCSYRCITSYESRKLEEFSLCIIQKHNCFGLNADIPMVPDPAPMASFKGQPMTHELAEDLFIGWLQDPSTALAPLRGG--EQLPYSWRVFAGKNAAYDFFPCQNQLFYRGKGRGGMWYDPVFQVKTIDGRTVWRRRHYRVKRDRLPGTFRFSVLDNGVTSNEFWRVLDCEEGLDWCVFYYSGAASRAGLSYSGAILASKSGDWPASQEA--RARIQQALDSAGIKMWELSNVDNSGCAGAPLD 553          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: GAQ90490.1 (hypothetical protein KFL_006470020 [Klebsormidium nitens])

HSP 1 Score: 373.6 bits (958), Expect = 1.300e-99
Identity = 206/452 (45.58%), Postives = 276/452 (61.06%), Query Frame = 0
Query:  203 PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPA--RPYGPLAGFWKALPL-PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHL--GGLQQ--KLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFD-GKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644
            PWT VM HM +R+ +  PAF +HVV + DL           P+P+S   A        P I+      + A+   +    A+   ++ALD  P +    R+G +   P   LAG    LP  P   +R L    T+   W R  +DD+L+ +L++++A +  +P ++  L+      LQ M T CG QI  C  + +CK AL CL +CPPNDQVC YRCIV YES   E F+LC+LQKHNCL   A  P  P   P+  FRG+ LTH  AE+I  G L     QQ  +L WSW+V++GVN AYD FP Q+  +Y +GKA   LWY PVF+V   D G+ VWRRR YRVRR   PGTFY++VLDNGVTS+E+WRI+D  +D+SW LFYY+GAAAAAGQ+Y+GA+L +P G+WP   +E    R+ AALD AGIK WEL++V++ S +GAPL+I
Sbjct:  120 PWTAVMAHMAQRLLWTDPAFVMHVVRDTDL----------PPIPSSQGSA--------PPIVVVVGVHDDAVGQRVVQRYAEALTLMALDCGPAVEAAVRLGGSFQHPRSALAGLLAKLPWGPAAARRQLA--ATIGSAWGRNRADDVLFGLLLLVDAFVRPVPQLAG-LRAQDLGTLQKMATKCGPQIWACLTDASCKQALDCLNACPPNDQVCSYRCIVTYESPLLEAFSLCVLQKHNCLGLHAEPPALPAVQPMAAFRGQPLTHTAAEDIFVGWLRDPARQQAGRLAWSWRVVAGVNAAYDSFPCQYQLFY-RGKARNSLWYDPVFKVQKLDSGEVVWRRRHYRVRRGDAPGTFYFSVLDNGVTSNEYWRIVDCPDDLSWALFYYAGAAAAAGQAYSGAVLVTPDGDWPGKEQEE---RLCAALDAAGIKLWELYRVDNKSCDGAPLDI 546          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_010261049.1 (PREDICTED: uncharacterized protein LOC104599974 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 372.9 bits (956), Expect = 2.200e-99
Identity = 204/470 (43.40%), Postives = 286/470 (60.85%), Query Frame = 0
Query:  180 GPSKPVHVVTVVPGNGARGTLE-APWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAG--FWKALPL--PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642
            G S PV +V +V G G+   L+  PW EVM H   R++++   F + +V  +++LT+     +D P     E  +K   L+H DIL      N      +Q     V +++  DS P L  K  +G +  +  + G  F K   +         + + +TV   W+R +SDDI +C+LV+INA +  +P +   L+      L CM+ NCG QI++C  +P C+ AL CL  C P DQVC Y+CI  YES + E F+LC+LQKHNCL   A IP  P   P+  FRGE L HE+AE++  G LG L     WSW+V++G NPAYD FP Q+  +Y +GKA    WY+PVF+V T +GK VWRRR YRVRR K+PGTFY++VLDNGV S+E+W I+D AED+SW LF+YSGAA  AG +YTGA+L SP G++   P E  +P++++AL ++GIKEWEL+ V++ S    PL
Sbjct:   87 GQSTPVRIVGIV-GEGSVSPLKCTPWEEVMLHTVDRLKWIDEGFQM-LVFSDNILTQ-----SDDP---RVEALKK--ELSHADILVVVAVNNQESVKWIQTSGESVRNIICFDSSPTLINK--LGGSYIHTQVKGNIFTKITGIIQGNNTNESVEVVQTVSEAWDRYNSDDIRFCLLVIINAYIRPVPILKN-LRSKGLSTLNCMIKNCGPQILNCLLDPNCRKALQCLNRCSPVDQVCNYQCIASYESPQLEAFSLCVLQKHNCLELDARIPDKPYVPPMVQFRGEDLCHEVAEDLFVGWLGSLD----WSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVRTLEGKIVWRRRRYRVRRGKIPGTFYFSVLDNGVVSNEYWTIVDVAEDLSWGLFHYSGAAQVAGLAYTGAVLVSPNGQY---PNEMQRPQLISALKKSGIKEWELYTVDNRSCPDPPL 533          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PON85654.1 (violaxanthin de-epoxidase-like protein [Trema orientalis])

HSP 1 Score: 372.9 bits (956), Expect = 2.200e-99
Identity = 199/464 (42.89%), Postives = 275/464 (59.27%), Query Frame = 0
Query:  184 PVHVVTVVPGNGARGTLEA-PWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644
            PV +V +V G+G    L++ PW EVM H  +R+++V   + + V T+            D     S         L++ DIL     +N      +Q     + +++  +S P L  K            + FW  L    +  + + +  TV   WER +SDD+ +C+LV+INA +  +P +   L+   F  L CM  NCG QI++C  +P C+ AL CL +C P DQVC YRCI  YES   E F+LC+LQK+NCL   A IP  P   P+  FRGE L HE+AE++  G LGGL     WSW+V++G NPAYD FP Q+  +Y +GKA    WY+PVF+V T +GK VWRRR YRV+R KVPGTFY++VLDNGV S+EFW I DA +D+SW LF+YSGAA  AGQSYTGA+L SP G +P+   E  + R+++AL++ GI+EWEL+ V++ S    PL I
Sbjct:   84 PVRIVALV-GHGTLSPLKSTPWEEVMLHTAKRLKWVDEGYEMLVFTD------------DFSESNSENALNLERVLSNADILVIVGVENQESVKWVQSNGGNINNIICFESSPGLENKLGGSYVENESKGSNFWGQL---KKSNQTVEVVRTVSEAWERHNSDDLRFCILVIINAYIRPVPILKN-LRSKGFSTLNCMAKNCGNQILNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPSLEAFSLCVLQKNNCLGLDAKIPERPYVPPMAKFRGEDLRHEVAEDVFVGWLGGLD----WSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVKTLEGKMVWRRRKYRVKRGKVPGTFYFSVLDNGVVSNEFWTIADAPDDLSWGLFHYSGAARVAGQSYTGAVLVSPDGAYPS---EVERRRLVSALEKCGIEEWELYNVDNCSCVDPPLGI 522          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_011021952.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic-like [Populus euphratica])

HSP 1 Score: 372.5 bits (955), Expect = 2.800e-99
Identity = 199/468 (42.52%), Postives = 278/468 (59.40%), Query Frame = 0
Query:  181 PSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAG--FWKALPLPTERKR--LLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGK---ALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642
            P  PV +VT+V          APW EVM H  +R+++V   + + V T++   ++             TE   K  +L+  DIL      +      ++     VP+++  DS P L  K  +G +      +G  F K   +   +K    + + +TV   W+R +SDDI +C+L++INA +  +P +   L+   F  L CM+ NCG QI++C  +P C+ AL CL  C P DQVC YRCI  YES   E F+LC+LQK+NCL   A IP  P   P+  FRGE L+HE AE++  G LG L     WSW+VI+G NPAYD FP Q+  +Y +GK   + WY+PVF+V T +GK VWRRR YRV+R K+PGTFY++VLDNGV S+EFW I+D ++D SW LF+Y+GAA  AGQ+YTGA+L SP G   A P+E    R+ +AL++ GIKEWELF V++ S +  PL
Sbjct:   74 PDPPVRIVTIVGAGSISPLKRAPWEEVMLHTAQRLKWVDEGYDMLVFTDDLYQSKD-----------QTEILLK--ALSCADILLIVAVTDQESVKWIETESKNVPNIVCFDSSPNLVSK--LGGSYVQNETSGTLFAKTFGISLSKKASDSMDVVQTVSEAWKRHNSDDIRFCLLIIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPDCRKALQCLNKCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKIPEKPFVPPMARFRGEDLSHETAEDLFVGWLGSLD----WSWRVIAGQNPAYDQFPCQYQLFY-RGKVKGSFWYEPVFQVKTLEGKVVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFHYNGAARVAGQAYTGAVLVSPDG---AYPDEKESKRLASALEKCGIKEWELFTVDNCSCQDPPL 517          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_020098700.1 (uncharacterized protein LOC109717362 isoform X2 [Ananas comosus])

HSP 1 Score: 372.5 bits (955), Expect = 2.800e-99
Identity = 202/485 (41.65%), Postives = 281/485 (57.94%), Query Frame = 0
Query:  166 NMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTL-EAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKAL---PLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644
            N+SP    + +     ++PV +V VV G G+   L + PW EVM H   R+++V   F + V T+  +L+ G+            +H      L+H ++L      N      L+     +P+++  +S P L  K   G          F+  L     P+ RK    + + V   WER +SDDI +C+LV+IN+ +  +P +   L+      + CML NC  Q+++C  +P C+ AL CL SC P DQVC YRCI  YES   E F+ C+LQKHNCL   A IP  P  AP++ FRGE L+HE+AE++  G LG  +    WSW+VI+G NPAYD FP Q+  +Y +GKA     Y+PVF+V T D K VWRRR YRVRRA VPGTFY++VLDNGV S EFW I+D ++D++W LF+YSGAA AAG SYTGA+L SP G +   P +S   R+ +AL+++ IK WEL  V++ S    PL I
Sbjct:   61 NLSPIRSLAAEKRGDAAQPVRIVAVV-GEGSLSPLKDTPWEEVMRHTADRLKWVDEGFEMLVFTDNSVLSDGV------------DHENLRKELSHSNMLVDVAVNNQEAVEWLRENSENIPNIICFESSPALVNKLG-GSCIQLSRKQNFFTKLAEIAKPSNRKESSEVVKAVSDAWERHNSDDIRFCLLVIINSYIKPVPILKN-LRAKGLSTINCMLKNCRSQLLNCLFDPNCRKALQCLNSCSPTDQVCNYRCIASYESPNLEAFSFCVLQKHNCLELDAEIPSKPYVAPLSIFRGEILSHEIAEDLFIGWLGNFE----WSWRVIAGQNPAYDQFPCQYQLFY-RGKAKGSFCYEPVFQVRTLDEKLVWRRRKYRVRRASVPGTFYFSVLDNGVVSKEFWTIVDVSDDLTWGLFHYSGAAQAAGLSYTGAVLVSPDGMY---PPDSESQRVASALEKSSIKSWELHTVDNCSCINPPLGI 522          
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_002306359.2 (violaxanthin de-epoxidase, chloroplastic [Populus trichocarpa] >PNT35658.1 hypothetical protein POPTR_005G085800v3 [Populus trichocarpa])

HSP 1 Score: 371.7 bits (953), Expect = 4.800e-99
Identity = 199/468 (42.52%), Postives = 277/468 (59.19%), Query Frame = 0
Query:  181 PSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAG--FWKALPLPTERKR--LLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642
            P  PV +VT+V           PW EVM H  +R+++V   + + V T++   ++             TE   K  +L+  DIL      +      ++     VP+++  DS P L  K  +G +      +G  F KA  +   +K    + + +TV   W+R +SDDI +C+L++INA +  +P +   L+   F  L CM+ NCG QI++C  +P C+ AL CL  C P DQVC YRCI  YES   E F+LC+LQK+NCL   A IP  P   P+  FRGE L+HE AE++  G LG L     WSW+VI+G NPAYD FP Q+  +Y +GKA    WY+PVF+V T +GK VWRRR YRV+R K+PGTFY++VLDNGV S+E W I+D ++D SW LF+Y+GAA  AGQ+YTGA+L SP G   A P+E    R+ +AL++ GIKEWELF V++ S +  PL
Sbjct:   74 PDPPVRIVTIVGAGSISPLKRTPWEEVMLHTAKRLKWVDEGYDMLVFTDDLYQSKD-----------QTEILLK--ALSCADILLIVAVTDQESVKWIETESKNVPNIVCFDSSPNLVNK--LGGSYVQNETSGTLFAKAFGISPSKKASDSMDVVQTVSDAWKRHNSDDIRFCLLIIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPDCRKALQCLNKCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKIPEKPFVPPMARFRGEDLSHETAEDLFVGWLGSLD----WSWRVIAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVKTLEGKVVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNECWTIVDVSDDFSWGLFHYNGAARVAGQAYTGAVLVSPDG---AYPDEKESKRLASALEKCGIKEWELFTVDNCSCQDPPL 517          
The following BLAST results are available for this feature:
BLAST of NO08G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PON58695.13.400e-10043.53violaxanthin de-epoxidase-like protein [Parasponia... [more]
XP_004237473.19.800e-10044.14PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
XP_015073809.19.800e-10044.35PREDICTED: uncharacterized protein LOC107017997 [S... [more]
PRW45412.19.800e-10041.60violaxanthin de- chloroplastic [Chlorella sorokini... [more]
GAQ90490.11.300e-9945.58hypothetical protein KFL_006470020 [Klebsormidium ... [more]
XP_010261049.12.200e-9943.40PREDICTED: uncharacterized protein LOC104599974 is... [more]
PON85654.12.200e-9942.89violaxanthin de-epoxidase-like protein [Trema orie... [more]
XP_011021952.12.800e-9942.52PREDICTED: violaxanthin de-epoxidase, chloroplasti... [more]
XP_020098700.12.800e-9941.65uncharacterized protein LOC109717362 isoform X2 [A... [more]
XP_002306359.24.800e-9942.52violaxanthin de-epoxidase, chloroplastic [Populus ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL106nonsL106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR139ngnoR139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008865NSK008865Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01830.1NO08G01830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582421gene_3512Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g81gene3882Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01830.1NO08G01830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01830 ID=NO08G01830|Name=NO08G01830|organism=Nannochloropsis oceanica|type=gene|length=4162bp
AAGAGAGAACTGCCTTAGCTGTCTTTATGTATTGTATAGTTGTGGACGTG
TTTGGGAAGACGGGGCGTGAAAATGTGCATGTAGGACGTGTGGAACTCGC
CACGCTGCTAGAGCAGGAACAACACGAAGAAAGGGCCTGTTCCCCCACGC
GTCCCCTAGAAATCATAAACGGGTCCCAAATGTCTGAAAATTCACACATT
GTTCCTTCGGCAGAAACTGTGCTTCAGCAGGCTCCCTGAGGACACATGAG
TTGCCGGGACAAGCGGGTCAAAATGCTGGGCTCGTCGGGAAGTGTCCCAA
ATGTAGGATGCTGCAGACATAGCCGTGGAGCAGGAGGCTGTCAGGCAGCA
CAAATATCCTTCCCGCTATGCAGAATACATACATTCGTGCGCCTCCGAAA
CCTTTTACTGAAGATTATGATGGTATGAGAGCGTGTAAAACTTGAGGCAA
Ggtaaggaacaacagattttgcctcatctccagtccaatagtacaagcta
atcgagccgctttcttacagggagtctgcgtcagcacaactgaatgctcc
ttgttctgattacagcttcaataaacctctatattccgatacatagCCGC
ACAGAGCCTCACAACATTTCTTTTGCCTTGTCAACGCATTTGGCTGGGAT
ATGGGCTTGAAAATCGGCCCAGAAAGAGTCCACTCTTGCTTCGTTCGCAC
GTCGCACTTTTTACTATAGTAGTAAAAGACGGTATTTTGAATCGACGTTA
CGATGCGGAGGCTCGTGACAGAAGGAGTATGACCCAAGAGGCGCAACCTG
CCAGCCCATTTCCCACCTTCGTTATATCCCATTGTCCGCGTCACTTGACA
TGACATGCACTCCCATGAATTGTGCCTTTGTTCTTCCCCACCCTGGAACG
GGCATCACAAGTGTCAACACATTCCCGCATCCTCGACAGGCCTTTGCAAG
GCATCATCATGACTCGACACCGGCAACACGACCTACGGCGAGCTCGAGCA
AGCACAACACCAACTTCGAGGAACCATAGGCGAAGAACGACGACGACAAT
ATCGACCACCACTCTGAAGTTCCTACTATTGGCTATCTGCCTGGGTGCCT
GCATGTGTTCGGCTTTCTTCTATTCGCCTCCCATCTTAAAACGCAAGGCA
GCTCCACCCCCTGCCTCCTCCTCGACGTCCTCCTCCTCTTCTGCCGCCGC
TGCAGCTGCAGATTACGAAAAAGCGCATGCATTGGTCGCTGCAGCCCGAC
CCAAAACTCCTATTTTTTGGGTGGCGCCATTGCTCATGCGCTTGTGGAAA
AACAAGCCGAGCACCAGCAAGCGTAGCGGCGCCAAGGGCAGCGATTGTGG
GGGTGATTTTGGCGGGTGTCGGTGTGGGGAAGGAGGAGGGGTGCATGGCA
GTTGGATGAGCAGCGCCACGGTCTTGGCGGCGAGTGCCTCGTCTTCGGCA
GACAACATGTCACCAAGTGGATTTTCTTCGACGAAAACAATTGCTGGCCC
TTCCAAGCCCGTGCACGTGGTAACGGTCGTCCCAGGGAATGGGGCAAGGG
GGACGCTGGAAGCACCATGGACGGAAGTCATGGAGCATATGCATCGCCGG
ATGCAGTACGTGAGTCCTGCCTTCTCCCTGCATGTTGTGACAGAGGAAGA
CTTACTGACTCGTGGATTGGCAGCCTTGGCCGACCTCCCCGTCCCTGCCT
CCACCGAGCACGCACGCAAAACTTCCTCCCTCAACCACCCAGACATCCTC
TACTTCTGCAAAACCCAAAATCCCGCCATTGCTCCTTTGCTACAGCACTA
CATCGCCCAGGTTCCTCACGTTCTCGCCCTTGACTCCTGCCCTATTTTGA
CCCGAAAGACGCGGATTGGTCCTGCACGTCCCTACGGACCTTTGGCGGGG
TTTTGGAAGGCCCTCCCTTTGCCAACAGAGAGGAAGAGGCTGTTGACTTT
GTTTGAAACTGTCCAGGGATTTTGGGAACGGGGGCATAGCGATGATATAC
TTTATTGTGTGTTGGTGGTAATCAATGCCGTGCTGGTCGATATCCCGGCG
GTGTCGGAGATACTGAAGCCTGTGACTTTTCAGGCCTTGCAATGCATGTT
GACGAATTGCGGGAAGCAGATTGTGGATTGTCAGAGGAATCCAGCGTGTA
AAGCGGCCTTAGCCTGCCTAGAGAGCTGTCCACCCAACGATCAAGTCTGT
CGGTACCGCTGCATCGTCCAATACGAGTCCACCGAGTTCGAACAGTTCGC
CCTCTGCATCCTCCAAAAACACAACTGCCTCCGAAACCAAGCCGCCATCC
CCATGTCCCCCGACCCAGCCCCGATCACCCATTTTCGCGGCGAGAAACTT
ACGCATGAGATGGCGGAAGAAATTCAATTCGGGCACCTAGGAGGACTTCA
GCAGAAGCTACCCTGGAGTTGGAAGGTCATCAGTGGAGTCAACCCgtacg
tcattccctcctttcccttcccccaacccacctctattgtgccatttacc
ttgctaacccgctcttttcccttcctcgctctctgaagTGCATACGACTT
CTTCCCTTCCCAGCACATGACGTACTACCAGAAAGGCAAAGCCCTGTGGT
ACCAGCCGGTTTTCCGGGTGATTACCTTTGACGGAAAGCAGGTCTGGAGG
CGCAGGCTGTATCGTGTCCGGAGGGCCAAGGTGCCGGGAACCTTCTACTA
TACTgtgagtgacgataagaggaggaaggcggagaagagaggcaaagagg
aggggctgtttggtttgtttgattgatcgcgggtctagcggttctgactg
tatcgcgtgcgaaggccttgggtccccagaaccatttattacaatatatg
tatgggggtggagaagggagggaagtaggaaggggcagaagtgcgtcgat
agtgcactgttctggatttggcgacccaccatacccaccgcaagataatg
atcatctcatctttcctcctttatctccacttttctcgccttttcttcaa
cccaatacagGTGCTAGACAACGGTGTAACGTCTTCAGAATTCTGGCGAA
TCATCGACGCCGCGGAAGACATGTCCTGGGTTCTCTTCTACTACTCAGGA
GCTGCTGCTGCTGCTGGTCAATCTTACACGGGAGCGATCCTCGCTTCCCC
TACAGGGGAGTGGCCAGCAGGACCAGAAGAAAGCTACAAGCCAAGAATAT
TGGCGGCATTGGATAGGGCAGGAATTAAGGAGTGGGAACTGTTTAAAGTG
AATCATGGTAGCTCGGAGGGGGCCCCGCTAGAGATCGATCCGTTGGCGGA
GAGACGGTTCATGTACCCGGGGTGGGCGGGGGCGAAGAAGGCGGAGGCTA
GTGCTGGTGGAAGCAAGGAGGAAGAGGCGGTAGCTGTGGCGTAGAATCTA
TCGGGCTGAATTGTTCTCGGATGGGGTTGATTTACGTTCCTTGCCGTGAG
GAAAGAAAAGTATGAGGTAGGACGGGGGTTGGGGCTTATTTATGAACGTT
TGGGGGCTAGAGACATGGAAACTGAGAAGGGAAGGAAACCGATGGATTCG
AAGCCATGTGTCTTGTTTCTGTTGTAATGTACACTATCTAGCAACAAGGC
CGAATACACGAAGCGGCAAATAGCTGGAGAAGCAGCACCAGCAGTGCCCC
GGCAGCAAATAGCAGCAAGAAGAGTCACTGAGAAGACGCTCAACTTATCA
AAAATAAACTCCCCACCGTCATTGTCGTATTTGTAGATTGTCCATGTATA
GGCAGATAGACGGGAAGAGAGGTGGATGAGGGAAGAAAAAGGAACACGAT
ACCCAAGAAGAAGAAGATGAAGAAATAAGGGCGACGCGAAGGACAGGAAG
ATGAATAACGAGGGACAGTAGCCATTTTATTGATCCGCATTGCTCGCACC
CGGGATTGGACATCGCATGCAGAATAGGAGAGACGCACAAAAACAAAGCA
ACTTGGAAGAGATGGGGTATTTTTGACAACTCTCCCGGTTAACAAAGTGG
CGACAAAGCTACCTAGTAAAAACAAGACGCGACATAATGGATGAGAAACA
TCGAATGTGACGGGAAACAAACTTGTCATTCATTTTCTCCTTCATCTTCT
TCATCTTCTTCTTCTTCTTCTCCTTCTTCTCTTCTTTTTTCTTCTTCTTC
TTCTTCTTCTTC
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protein sequence of NO08G01830.1

>NO08G01830.1-protein ID=NO08G01830.1-protein|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=679bp
MTRHRQHDLRRARASTTPTSRNHRRRTTTTISTTTLKFLLLAICLGACMC
SAFFYSPPILKRKAAPPPASSSTSSSSSAAAAAADYEKAHALVAAARPKT
PIFWVAPLLMRLWKNKPSTSKRSGAKGSDCGGDFGGCRCGEGGGVHGSWM
SSATVLAASASSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTL
EAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTE
HARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRK
TRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYC
VLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAA
LACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMS
PDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDF
FPSQHMTYYQKGKALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYY
TVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTG
EWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEIDPLAERR
FMYPGWAGAKKAEASAGGSKEEEAVAVA*
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Synonyms
Publications