NO08G01830, NO08G01830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_005854450.1 (violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana CCMP526] >EKU21916.1 violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana CCMP526] >EWM26585.1 violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana]) HSP 1 Score: 860.5 bits (2222), Expect = 3.400e-246 Identity = 434/603 (71.97%), Postives = 492/603 (81.59%), Query Frame = 0 Query: 86 YEKAHALVAAARPKTPIFWVAPLLMRLWKNKPSTSKRSGAKGSDCGGDFGGCRCGEGGGVHGSWMSSATVLAASASSSADNMSPSGFSSTK------TIAGPSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPAST--EHARKTSSLNH------------PDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEIDPLAERRFMYPGWAGAKKAEASAGG 669 YEKAHA VAAARP+TPIFW+APL+ R+WKN + SKR+ +K CGG GGC C GGV S TVL+ + S+ A +P G ++ + A S+PVHVV VVPG+GARG LEAPWTEVM+HMHRRMQYV PAF+LHVVTEE++L RG AALA LP+ S+ A SS PD +YF +NP +A L+ Y+AQVPH++ALDSCP L +K+RIGPARPYGPLAGFWKA P+PTERKRLL LFETV+GFW+RGHSDD+LY VLVVINAVLVDIPAVSEILKPVT QAL+CML NCG QI+DCQRNPACKAAL+CLE C PNDQVCRYRCIVQYES EFEQFALCILQKHNCL+N AAIPMSPDPAP++HFRGE L+HE AEEIQFGHLG LQQ PWSWKVI+GVNPAYDFFPSQHMTYY+KG+ALWYQPVFRVITFDG++VWRRRLYRVRR KVPGTFYY+VLDNGVTSSEFWRI+DAA+D+SWVLFYYSGAAAAAGQSYTGAILASPTGEWP+ E K RILAALDRAGIKEWELF V+H S+GAPLEIDP+AE RFMYPGWAGA+ ++A G Sbjct: 86 YEKAHAFVAAARPRTPIFWMAPLIARVWKNY-ANSKRAASKDCSCGG-LGGCGC--AGGV--SKRGDRTVLSMATSAPA-KRTPRGQTTGRGRRVPPRPAAGSRPVHVVAVVPGHGARGKLEAPWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSXXXXXXXXXXXXSGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSA--EPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEIDPMAEARFMYPGWAGARTSQADDEG 679
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_021629363.1 (uncharacterized protein LOC110627383 [Manihot esculenta] >OAY35959.1 hypothetical protein MANES_12G144300 [Manihot esculenta]) HSP 1 Score: 389.0 bits (998), Expect = 2.900e-104 Identity = 211/470 (44.89%), Postives = 286/470 (60.85%), Query Frame = 0 Query: 182 SKPVHVVTVVPGNGARGTLE-APWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPA----RPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 SKP + V GNG+ L+ APW EVM H +R+++V + + V T+ + D T++ K L+H D+L N +Q VP+++ DS P L K +G + G L G + LP + K L + +TV W+R ++DDI +C+LV+INA + +P + L+ F L CM+ NCG QIV+C +P C+ AL CL +C P DQVC YRCI YES E F+LC+LQK+NCL A IP P P+ FRGE+L HE AE++ G LG L WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +G+ VWRRR YRV+R KVPGTF+++VLDNGV S+EFW +D ++D SW LF+YSGAA AAGQSYTGA+L SP G A P E + R+++ALD+ GIKEWELF V++ S +G PL I Sbjct: 75 SKPPVKIVAVVGNGSLSPLKSAPWEEVMLHTAKRLKWVDEGYQMIVFTD------NVCQCND-----KTKYLEK--ELSHADVLLIVAVSNQESVKWIQMNSQTVPNIICFDSSPNLENK--LGGSYVQNEINGTLCGKIIGVSLPNKIKESLQVVKTVSEAWDRHNADDIRFCLLVIINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQIVNCLLDPNCRKALQCLNNCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDARIPERPYVPPMVKFRGEELCHETAEDLFVGWLG----TLDWSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVQTLEGRMVWRRRKYRVKRGKVPGTFHFSVLDNGVVSNEFWTTVDVSDDFSWGLFHYSGAARAAGQSYTGAVLVSPDG---AYPNEKERERMVSALDKCGIKEWELFTVDNCSCQGPPLGI 520
BLAST of NO08G01830 vs. NCBI_GenBank
Match: CDM83613.1 (unnamed protein product [Triticum aestivum]) HSP 1 Score: 380.6 bits (976), Expect = 1.000e-101 Identity = 207/490 (42.24%), Postives = 281/490 (57.35%), Query Frame = 0 Query: 157 AASASSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPL--PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 +AS S SP S P V +V VV + PW EVM H R+++V F + V T++ S +H L+H D+L L H +P+VL S P L K + G F K + + P+ + + +T+ WER +SDDI +C+LVV+NA + + A+ + L+ L CM+TNCG QI++C +P C+ A+ CL SC P DQVC YRCI YES E F+LC+LQKHNCL A IP P P++ FR +KL+HE+AE++ G L GL+ WSW+V++G NPAYD FP Q+ +Y +GKA WY+P+F+V T +GK VWRRR YRVRRA VPGTFY++VLDNGV S EFW I+D ++D SW LF+Y GAA AAGQSYTGA+L +P G +P G PR+ +AL++ GIK+WEL+ V++ S GAPL Sbjct: 38 SASRRLSGITCSPGIASVAGQATSPEDAVRIVAVVGDGSISPLKDTPWDEVMRHTADRLKWVDEGFEMLVFTDK-----------------SIDHDDLKKELSHCDMLVNVAITGQESVQWLIHSSKNIPNVLCFQSSPSLINKLGATFVQYTGEQDLFGKLINVGKPSGTEESTEVLKTISNAWERHNSDDIRFCLLVVVNAYIRPV-AMLKNLRAKGLSTLGCMITNCGPQILNCLFDPDCRKAIQCLNSCSPTDQVCNYRCIASYESPHLEAFSLCVLQKHNCLELNAEIPSKPSVTPLSMFREQKLSHEVAEDLFVGWLDGLE----WSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPIFQVRTLEGKLVWRRRKYRVRRASVPGTFYFSVLDNGVVSKEFWTIVDVSDDFSWGLFHYHGAAQAAGQSYTGAVLVTPDGSYPDGD----NPRLDSALEKCGIKKWELYMVDNCSCTGAPL 500
BLAST of NO08G01830 vs. NCBI_GenBank
Match: KCW54347.1 (hypothetical protein EUGRSUZ_I00312 [Eucalyptus grandis]) HSP 1 Score: 380.2 bits (975), Expect = 1.400e-101 Identity = 202/477 (42.35%), Postives = 282/477 (59.12%), Query Frame = 0 Query: 177 TIAGPSKPVHVVTVVPGNGARGTLE-APWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARP------YGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 T A PS P + V G GA L+ A W+EVM H +R+++V F +HV T+ + A+ A+ L H DIL + ++ + ++++ DS P L+ K + +G L G +++ + K + ET+ W R +SDDI +C+L+VINA + +P + L+ F L CM+ NCG QI++C +P C+ AL CL C P DQVC YRCI YES E F+LC+LQK+NCL AAIP P P+ FRGE + HE AE++ G LG L WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRV+R K+PGTFY++VLDNGV S+EFW I+D ++D+SW LF+YSGAA AGQSYTGA+L SP G++ P+E+ R+ +AL+ GIK+WEL+ V++ S PL I Sbjct: 56 TEATPSPPPVRIVAVVGEGASSPLKGATWSEVMLHTAKRLKWVDDGFEMHVFTDNFCQFKDQAS------------AKLQEELRHADILVIIAVTSQESVKWIERNSKNIQNIISFDSSPGLSNKLGGSVVQTETKGTIFGKLVGTFES----KQTKETSDVIETISEAWMRRNSDDIRFCLLIVINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPNCRKALQCLNQCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAAIPEKPYIPPMVKFRGENICHESAEDLFVGWLGNLD----WSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVRTLEGKMVWRRRRYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYSGAARVAGQSYTGAVLVSPDGQY---PKETDDGRLASALENCGIKDWELYAVDNCSCLDPPLGI 507
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_010027757.1 (PREDICTED: uncharacterized protein LOC104418190 [Eucalyptus grandis] >KCW54348.1 hypothetical protein EUGRSUZ_I00312 [Eucalyptus grandis]) HSP 1 Score: 380.2 bits (975), Expect = 1.400e-101 Identity = 202/477 (42.35%), Postives = 282/477 (59.12%), Query Frame = 0 Query: 177 TIAGPSKPVHVVTVVPGNGARGTLE-APWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARP------YGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEI 644 T A PS P + V G GA L+ A W+EVM H +R+++V F +HV T+ + A+ A+ L H DIL + ++ + ++++ DS P L+ K + +G L G +++ + K + ET+ W R +SDDI +C+L+VINA + +P + L+ F L CM+ NCG QI++C +P C+ AL CL C P DQVC YRCI YES E F+LC+LQK+NCL AAIP P P+ FRGE + HE AE++ G LG L WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRV+R K+PGTFY++VLDNGV S+EFW I+D ++D+SW LF+YSGAA AGQSYTGA+L SP G++ P+E+ R+ +AL+ GIK+WEL+ V++ S PL I Sbjct: 67 TEATPSPPPVRIVAVVGEGASSPLKGATWSEVMLHTAKRLKWVDDGFEMHVFTDNFCQFKDQAS------------AKLQEELRHADILVIIAVTSQESVKWIERNSKNIQNIISFDSSPGLSNKLGGSVVQTETKGTIFGKLVGTFES----KQTKETSDVIETISEAWMRRNSDDIRFCLLIVINAYIRPVPILKN-LRSKGFSTLNCMVKNCGPQILNCLLDPNCRKALQCLNQCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAAIPEKPYIPPMVKFRGENICHESAEDLFVGWLGNLD----WSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVRTLEGKMVWRRRRYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYSGAARVAGQSYTGAVLVSPDGQY---PKETDDGRLASALENCGIKDWELYAVDNCSCLDPPLGI 518
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_008808566.1 (PREDICTED: uncharacterized protein LOC103720580 [Phoenix dactylifera] >XP_008808567.1 PREDICTED: uncharacterized protein LOC103720580 [Phoenix dactylifera]) HSP 1 Score: 380.2 bits (975), Expect = 1.400e-101 Identity = 205/466 (43.99%), Postives = 274/466 (58.80%), Query Frame = 0 Query: 181 PSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKA--LPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 P+ V +V VV APW +VM H R+++V F + V +++ + + + E+ RK L D+L +N LQ A +P+V+ +S P + K AR G F K + P RK L + TV WER +SDDI +C+LV+IN + IP + L+ L CM+ NCG +I++C +P C+ AL CL +C P DQVC Y C+ YES E F+LC+LQK+NCL A IP P AP++ FRGE LTHE+AE++ G LG L WSW+VI+G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRVRRA VPGTFY++VLDNGV S EFW IID +D+SW LF+Y GAA AAG SYTGA+L SP G + P E R++AAL++ IK+WEL+ V++ S APL Sbjct: 68 PTASVRIVAVVGEGSVSPLKNAPWEQVMLHTANRLKWVDEGFEMLVFSDKSIHSN----------DTNCENLRK--ELARSDMLVNVAIKNQESVEWLQTNSASIPNVICFESSPSMRNKLGGSYARTKGEENMFSKLGDIVEPRSRKESLEVVRTVSDAWERHNSDDIRFCLLVIINTYIKPIPILKN-LRAKGLSTLNCMIKNCGSKILNCLLDPNCRKALQCLNTCSPTDQVCNYLCVASYESPTLEAFSLCVLQKNNCLELDAEIPSKPSVAPLSMFRGEALTHEIAEDLFIGWLGDLD----WSWRVIAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVRTLEGKLVWRRRRYRVRRANVPGTFYFSVLDNGVVSKEFWTIIDVCDDLSWGLFHYRGAAQAAGLSYTGAVLVSPDGMY---PPEMGGQRLVAALEKCSIKDWELYTVDNCSCNNAPL 512
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_010929367.1 (PREDICTED: violaxanthin de-epoxidase, chloroplastic [Elaeis guineensis]) HSP 1 Score: 379.4 bits (973), Expect = 2.300e-101 Identity = 201/466 (43.13%), Postives = 274/466 (58.80%), Query Frame = 0 Query: 181 PSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPT--ERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 P+ V +V VV PW +VM H ++++V F + V +++ + + T H L H D+L ++ LQ A VP+V+ +S P + K AR G F K + T RK L + +TV WER +SDDI +C+LV++N + +P + L+ L CM+ NCG +I++C +P C+ A+ CL +C P DQVC Y C+ YES E F+LC+LQK+NCL A IP P AP++ FRGE LTHE+AE++ G LG L WSW+VI+G NPAYD FP Q+ +Y +GKA WY+PVF+V T +GK VWRRR YRVRRA VPGTFY++VLDNGV S EFW IID +D+SW LF+Y GAA AAG SYTGA+L SP G +P PE + R++AAL++ GIK+WEL+ V++ S PL Sbjct: 68 PAPLVRIVAVVGEGSVSPLKNTPWEQVMLHTANKLKWVDEGFEMLVFSDKSIHSN------------DTNHENLRKELAHSDMLVNVAIKSQQSVEWLQTNSASVPNVICFESSPSMRNKLGGSYARTKGEENMFSKLANIATSRSRKESLEVVKTVSDAWERHNSDDIRFCLLVIVNTYIKPVPMLKN-LRAKGLSTLNCMVKNCGSKILNCLLDPNCRKAIQCLNTCSPTDQVCNYLCVASYESPNLEGFSLCVLQKNNCLELDAEIPSKPSVAPLSMFRGEALTHEIAEDLFIGWLGDLD----WSWRVIAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPVFQVRTLEGKLVWRRRRYRVRRANVPGTFYFSVLDNGVVSKEFWTIIDVCDDLSWGLFHYHGAAQAAGLSYTGAVLVSPDGVYP--PEMGGR-RLVAALNKCGIKDWELYTVDNCSCNNPPL 512
BLAST of NO08G01830 vs. NCBI_GenBank
Match: CEM11601.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 379.0 bits (972), Expect = 3.000e-101 Identity = 224/537 (41.71%), Postives = 307/537 (57.17%), Query Frame = 0 Query: 142 GGGVHGSWMSSATVLAASASSSADNMSPSGFSSTKTIAGPSKPV-----HVVTVVPGNGARG----------TLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCK--TQNPAIAPLLQHYIAQVPHVLALD----SCPILTRKTRIGPARPYGPLAGFWKALPLPTER-KRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEIL--KPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQ-KGKALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEID----PLAER 650 G G + + + A S+ D SP K AG KP+ VV +VP G G + W +V++HM R+ + SP F L + TE+ L + A ++L S + T +++ L K N + +P +L+ S P+ + + R+G P G A P R R L + W+R SDD+LY + V+I++ + DIP V L K + L+CM TNC QI++C ++PAC+ AL CL +CP NDQVC YRCIV +ES FE F+LCILQKHNCL N A IP+ P P P+ F+G+ LT+E AE+I G LG + PWSWKV++G NPAYDFFP+QH +Y+ K A WY PVFRV T+DG+ VWRRR YRV+RA PGTF+++VLDNGVTS+E+W I+D A+D SW +F+YSGAA+ AGQ Y GA++ S G WP + RI AALD+AG+K WEL++V + SEGAPL + P+AE+ Sbjct: 57 GSGARQQNVMMTSTVMEPAVSTVDEESP------KAYAGELKPLTNASATVVCIVPAAGRPGHKSHFLTKPFKEQVEWPDVLQHMAERLTWSSPNFKLKIFTEDVLSSP--TAPSNLSAALSNANILLTLNVHDRQALTNLKAIVTNTQMGSRTNESAPFLPTILSFGLGGRSSPVESLQ-RMG-GTPVGSFVRKVSARVAPWSRVSRALKTKRVLDILWQRRSSDDLLYFMEVLIDSYVADIPLVKSQLGMKEMGSGVLKCMWTNCQDQIIECMKSPACRQALFCLTNCPLNDQVCTYRCIVTHESPAFEAFSLCILQKHNCLNNSAPIPVYPRPEPLRTFKGKPLTYESAEDIYVGWLG----QDPWSWKVVAGKNPAYDFFPNQHQIFYRGKRSAFWYDPVFRVTTYDGRVVWRRRHYRVKRAAEPGTFWFSVLDNGVTSNEYWTILDCADDFSWAIFHYSGAASVAGQQYRGALVVSRDGAWPKIDGMETRRRIEAALDKAGVKTWELYEVVNDGSEGAPLGLPDSGAPMAEQ 579
BLAST of NO08G01830 vs. NCBI_GenBank
Match: PSS30264.1 (Violaxanthin de-epoxidase [Actinidia chinensis var. chinensis]) HSP 1 Score: 379.0 bits (972), Expect = 3.000e-101 Identity = 205/487 (42.09%), Postives = 286/487 (58.73%), Query Frame = 0 Query: 161 SSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTLE-APWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKT--RIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 +SSA + + T+ + P+ + + G G+ L+ APW EVM H +R+++V + + V T ++LL L DL R+TS IL N +Q +P++ DS LT K G + L P + + + T+ WER +SDDI +C+L+++NA + +P + L+ F L CM+TNCG QI++C +P C+ AL CL C P DQVC YRCI YES E+F+LC+LQKHNCL A IP P P+ F+GE L+HE+AE++ G LG KL WSW+V++G NPAYD FP Q+ +Y +GKA WY+PVF+V+T +G+ VWRRR YRV+R K+PGTFY++VLDNGV S+EFW I+D ++D SW LF+Y GAA AGQSYTGA+L SP GE+ P E + +++ALDR GIKEWELF V++ S + PL Sbjct: 51 TSSATVSAVLEVNEDSTLKDLNAPLVRIVALVGEGSISPLKSAPWLEVMLHTAKRLKWVDEGYEMLVFT-DNLLESNSPKLKDL-----QREIRRTS------ILVIVALTNQESVKWVQTNSQNIPNIFCFDSSSTLTNKLGGLFIQTETKGNIFSKLAKLSRPNKTNESMEVIGTISEAWERHNSDDIRFCLLIIVNAYIRPVPILKN-LRAKGFSTLNCMVTNCGSQILNCLLDPNCRKALQCLNQCSPVDQVCNYRCIASYESQTLEEFSLCVLQKHNCLELDAKIPTKPQVPPMVKFQGEDLSHEIAEDLFVGWLG----KLEWSWRVVAGQNPAYDQFPCQYQLFY-RGKARGSFWYEPVFQVMTLEGELVWRRRKYRVKRGKIPGTFYFSVLDNGVVSNEFWTIVDVSDDFSWGLFHYHGAARVAGQSYTGAVLVSPNGEY---PNERERLSLVSALDRCGIKEWELFTVDNCSCKDPPL 516
BLAST of NO08G01830 vs. NCBI_GenBank
Match: XP_020172412.1 (violaxanthin de-epoxidase, chloroplastic [Aegilops tauschii subsp. tauschii] >XP_020172413.1 violaxanthin de-epoxidase, chloroplastic [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 378.3 bits (970), Expect = 5.200e-101 Identity = 205/490 (41.84%), Postives = 279/490 (56.94%), Query Frame = 0 Query: 157 AASASSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPL--PTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKA---LWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPL 642 +AS S SP S P V +V VV + PW EVM H R+++V F + V T++ S +H L+ D+L L H +P+VL S P L K + G F K + + P+ + + +T+ WER +SDDI +C+LVV+NA + + A+ + L+ L CM+TNCG QI++C +P C+ A+ CL SC P DQVC YRCI YES E F+LC+LQKHNCL A IP P P++ FR +KL+HE+AE++ G L GL+ WSW+V++G NPAYD FP Q+ +Y +GKA WY+P+F+V T +GK VWRRR YRVRRA PGTFY++VLDNGV S EFW ++D A+D SW LF+Y GAA AAGQSYTGA+L +P G +P G PR+ +AL++ GIK+WEL+ V++ S GAPL Sbjct: 38 SASRRLSGITCSPGIASVAGEATSPEDAVRIVAVVGDGSISPLKDTPWDEVMRHTADRLKWVDEGFEMLVFTDK-----------------SIDHDDLKKELSRCDMLVNVAITGQESVQWLIHNSKNIPNVLCFQSSPSLVNKLGGTSVQYTGEQDFFGKLINVGKPSGTEESAEVLKTISNAWERHNSDDIRFCLLVVVNAYIRPV-AMLKNLRAKGLSTLGCMITNCGPQILNCLFDPDCRKAIQCLNSCSPTDQVCNYRCIASYESPHLEAFSLCVLQKHNCLELNAEIPSKPSVTPLSMFREQKLSHEVAEDLFVGWLDGLE----WSWRVVAGQNPAYDQFPCQYQLFY-RGKAKGSFWYEPIFQVRTLEGKLVWRRRKYRVRRASTPGTFYFSVLDNGVVSKEFWTVVDVADDFSWGLFHYHGAAQAAGQSYTGAVLVTPDGSYPGGD----NPRLDSALEKCGIKKWELYMVDNCSCTGAPL 500 The following BLAST results are available for this feature:
BLAST of NO08G01830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01830 ID=NO08G01830|Name=NO08G01830|organism=Nannochloropsis oceanica|type=gene|length=4162bpback to top protein sequence of NO08G01830.1 >NO08G01830.1-protein ID=NO08G01830.1-protein|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=679bpback to top Synonyms
Publications
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