NO08G01720, NO08G01720 (gene) Nannochloropsis oceanica

Overview
NameNO08G01720
Unique NameNO08G01720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length933
Alignment locationchr8:537918..538850 +

Link to JBrowse

Properties
Property NameValue
DescriptionDeoxyhypusine hydroxylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:537918..538850 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR021133HEAT_type_2
IPR004155PBS_lyase_HEAT
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: EWM26777.1 (deoxyhypusine hydroxylase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 307.4 bits (786), Expect = 5.100e-80
Identity = 225/310 (72.58%), Postives = 240/310 (77.42%), Query Frame = 0 
Query:    1 MAPNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYWVGGGGEGECEGEEVM 311
            MAP+VA LR CL+DV QPIQKRTHAAFVLRTDG SEA                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          VPEVADTCRLSLDLIRW                  LDKSPY+SVDPAPADR D+STAEL+ARLLD SLPLF RYRAMFSLRNRNTTEAVAALA+G +D SPLFRHEVAYVFGQMQNPASVPALK VLE+  EHRMVRHEAAEALGAVGG +CE +LA+F++D EVVVRESC VALGIA+YW      GE    EV+
Sbjct:   30 MAPDVAVLRKCLLDVSQPIQKRTHAAFVLRTDGESEAVSAIGEALRNKQDSALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPEVADTCRLSLDLIRWRHQGGEDASLAQEKGQIGLDKSPYMSVDPAPADRVDVSTAELEARLLDTSLPLFARYRAMFSLRNRNTTEAVAALAQGLKDPSPLFRHEVAYVFGQMQNPASVPALKAVLEDGTEHRMVRHEAAEALGAVGGADCEGVLARFVRDEEVVVRESCEVALGIAEYW------GESVAREVV 333
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: POM65624.1 (Deoxyhypusine hydroxylase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 226.5 bits (576), Expect = 1.200e-55
Identity = 152/293 (51.88%), Postives = 185/293 (63.14%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LRD ++D+ +P+ KRT A F LR+ GG E                                           XXXXXXXXXXXXXXXXXXXXXXXXX  LEKY  DP PEV+DTC+L++ L+++                G +D++PYLS DPAPA  +D+STAEL+  LLD +  +F +YRAMFSLRNRNT EA  ALAEGF D + LF+HEVAYV GQM+NP  VPALK VL +E EHRMVRHEAAEALG++G  ECE IL ++++D   VVRESC VAL I DYW
Sbjct:   19 PSFELLRDAMLDLSEPVGKRTRAIFYLRSRGGLEDLQVLLTALLNRKDSELMRHELAYVIGQFQMEEACETLHQVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKYCADPAPEVSDTCKLAVTLVKY-----KLAKAKGEVVEGEVDRNPYLSEDPAPAAEKDVSTAELRKILLDHNGDMFAKYRAMFSLRNRNTEEAALALAEGFNDPNALFKHEVAYVMGQMENPVLVPALKKVLLDETEHRMVRHEAAEALGSIGTTECEEILKEYLKDNVQVVRESCEVALDIMDYW 306
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: OWY97572.1 (Deoxyhypusine hydroxylase [Phytophthora megakarya])

HSP 1 Score: 222.2 bits (565), Expect = 2.200e-54
Identity = 126/293 (43.00%), Postives = 157/293 (53.58%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LR  ++D+ +P+ KRT A F LR+ GG E                                                                     VLEKY  DP PEV+DTC+L++ L+++                G +D++PYLS DPAPA  +D+STAEL+  LL     +F +YRAMFSLRNRNT EA  ALAEGF D + LF+HEVAYV GQM+NP  VPALK VL +E EHRMVRHEAAEALGA+G  ECE +L  +++D   VVRESC VAL I DYW
Sbjct:   19 PSFELLRAAMLDLSEPVGKRTRAIFYLRSRGGLEDLQVLLTALLNRKDSELMRHELAYVIGQFQMEEACDTLHQVLEDVEDDGMVRHEAAEALGAIGAAQSLPVLEKYCADPAPEVSDTCKLAVSLVKY-----KLAKAKGEIVEGEVDRNPYLSEDPAPAAEKDVSTAELRKVLLQHDGDMFAKYRAMFSLRNRNTEEAALALAEGFNDPNALFKHEVAYVMGQMENPVLVPALKKVLLDENEHRMVRHEAAEALGAIGTTECEELLKGYLKDDVQVVRESCEVALDIMDYW 306
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: XP_009530977.1 (hypothetical protein PHYSODRAFT_514765 [Phytophthora sojae] >EGZ13548.1 hypothetical protein PHYSODRAFT_514765 [Phytophthora sojae])

HSP 1 Score: 221.9 bits (564), Expect = 2.800e-54
Identity = 146/293 (49.83%), Postives = 176/293 (60.07%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LRD L+D+ +P+ KRT A F LR+ GG E                                             XXXXXXXXXXXXXXXXXXX     VLEKY+ D  PEV+DTC+L+  L+++                G++D++PYLS DPAPA  +  STAEL+  LLD    +F +YRAMFSLRNRNT EA  ALAE F D + LF+HEVAYV GQM+NP +VPALK VL +E EHRMVRHEAAEALGA+G  ECE IL +++ D   VVRESC VAL I DYW
Sbjct:   21 PSFERLRDALLDLSEPVGKRTRAIFYLRSRGGLEDLQVLLTALLNRKDSELMRHELAYVIGQFQREEACDTLHQVLEDEXXXXXXXXXXXXXXXXXXXAQSLPVLEKYSADAAPEVSDTCKLAASLVKY-----KLAKAKGEIVEGAVDRNPYLSEDPAPAAEKTKSTAELRQVLLDHDGDMFAKYRAMFSLRNRNTEEAALALAEAFADPNALFKHEVAYVMGQMENPVTVPALKKVLLDENEHRMVRHEAAEALGAIGTTECEEILKQYLNDDAQVVRESCEVALDIMDYW 308
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: CCI45562.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 217.2 bits (552), Expect = 7.000e-53
Identity = 156/293 (53.24%), Postives = 189/293 (64.51%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+  ALRD L+D+ QP+ KRT A F LRT G  E                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L+K+      E+++TCRL++DLI++                 +LD++PYLSVDPAPA  + +ST  L++ LLDPS  LF RYRAMFSLRNRNT E+  ALA+  +DS+ LFRHE+AYV GQM+NP ++ ALK +L +E EHRMVRHEAAEALGA+G +EC  IL KF  D + VVRESC VAL I DYW
Sbjct:    5 PSFEALRDALLDISQPLGKRTRAIFYLRTRGKHEDLHVLLQALQNRNDSELMRHELAYVIGQFQDTRACSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQALKKFVDHSNSEISETCRLAIDLIQY-----KINKEEARIDESNLDRNPYLSVDPAPAFEKSVSTNSLESILLDPSKQLFERYRAMFSLRNRNTEESAMALAKALKDSNRLFRHEIAYVMGQMENPVTISALKCLLLDESEHRMVRHEAAEALGAIGSKECADILRKFQFDQDQVVRESCEVALDIMDYW 292
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: CCA20324.1 (deoxyhypusine hydroxylase putative [Albugo laibachii Nc14])

HSP 1 Score: 212.6 bits (540), Expect = 1.700e-51
Identity = 148/293 (50.51%), Postives = 178/293 (60.75%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+  AL+D L+D+ QP+ KRT A F LRT G  E                                     XXXXXXXXXXXXXXXXXXXXXXXXXX       L+K+     PE+++TCRL++DLI++                 +LD++PYLSVDPAPA  + +    L++ LLD S PLF RYRAMFSLRNR T E+  AL +G  D S LFRHE+AYV GQM+NP +V ALK +L +E EHRMVRHEAAEALGA+G  EC  IL KF  D + VVRESC VAL I DYW
Sbjct:   30 PSFEALKDALLDISQPLGKRTRAVFYLRTRGQQEDLHVLLKALQNRNDTELMRHELAYVIGQFQHSGACSVXXXXXXXXXXXXXXXXXXXXXXXXXXQKESVQTLKKFVDHSDPEISETCRLAIDLIQY-----KINKENAKCDESNLDRNPYLSVDPAPAFEKSVPIETLESILLDQSRPLFERYRAMFSLRNRKTQESAMALTKGLNDKSRLFRHEIAYVMGQMENPVTVSALKRLLLDESEHRMVRHEAAEALGAIGSAECADILIKFQLDQDQVVRESCEVALDIMDYW 317
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: XP_002903133.1 (deoxyhypusine hydroxylase, putative [Phytophthora infestans T30-4] >EEY55557.1 deoxyhypusine hydroxylase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 210.7 bits (535), Expect = 6.500e-51
Identity = 157/293 (53.58%), Postives = 187/293 (63.82%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LRD L+D+ +P  KRT A F LR+ GG E                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            EV+DTC+L++ L+++                G +D++PYLS DPAPA  +D+STAEL+  LLDP+  +F RYRAMFSLRNRNT EA  ALAE F+D + LF+HEVAYV GQM+NP  VPALK VL +E EHRMVRHEAAEALGA+G  ECE IL ++++D   VVRESC VAL I DYW
Sbjct:   19 PSFEQLRDALLDLSEPTGKRTRAIFYLRSRGGLEDLQVLLTALLNRKDSELMRHELAYVIGQFQMEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVSDTCKLAVTLVKY-----KLAKAKGEVVEGEVDRNPYLSEDPAPAAEKDVSTAELRKVLLDPNGDMFARYRAMFSLRNRNTEEAALALAEAFQDPNALFKHEVAYVMGQMENPVLVPALKKVLLDETEHRMVRHEAAEALGAIGSTECEKILKQYLKDDVQVVRESCEVALDIMDYW 306
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: XP_008880632.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV90742.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 208.0 bits (528), Expect = 4.200e-50
Identity = 158/293 (53.92%), Postives = 183/293 (62.46%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LR  L+D+ QP+ KRT A F LRT GG +                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        D  PEVA+TC L+L L+++                  +D++PY SVDPAPA ++  ST EL+A LLD S  +F RYRAMFSLRNRNT +A  ALA  F D S LFRHE+AYV GQM NP +VPALK VL NE EHRMVRHEAAEALG++G  ECE IL  +++D   VVRESC VAL I DYW
Sbjct:    5 PSFEQLRASLLDLSQPMGKRTRAVFYLRTRGGKDELNVLLEALPNKKDSELMRHELAYVIGQFQDDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAPEVAETCALALRLVKYKHDPTEVNE--------EMDRNPYYSVDPAPAMQKSKSTEELKAILLDTSRSMFDRYRAMFSLRNRNTEDAALALASAFNDKSALFRHEIAYVMGQMVNPVTVPALKEVLVNEAEHRMVRHEAAEALGSIGTPECEEILQVYLKDAHQVVRESCEVALDIIDYW 289
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: ETL31636.1 (hypothetical protein L916_15629 [Phytophthora parasitica] >ETP07882.1 hypothetical protein F441_16010 [Phytophthora parasitica CJ01A1] >ETP35917.1 hypothetical protein F442_16033 [Phytophthora parasitica P10297])

HSP 1 Score: 207.2 bits (526), Expect = 7.200e-50
Identity = 156/293 (53.24%), Postives = 185/293 (63.14%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LRD L+D+ +P  KRT A F LR+ GG E                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             V+DTC+L++ L+++                G +D++PYLS DPAPA  +D+STAEL+  LLDP+  +F RYRAMFSLRNRNT EA  ALAE F D + LF+HEVAYV GQM+NP  VPALK VL +E EHRMVRHEAAEALGA+G  ECE IL ++++D   VVRESC VAL I DYW
Sbjct:   19 PSFEQLRDALLDLSEPTGKRTRAIFYLRSRGGLEDLQVLLTALLNRKDSELMRHELAYVIGQFQMEEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSDTCKLAVTLVKY-----KLAKAKGEIVEGEVDRNPYLSEDPAPAAGKDVSTAELRKILLDPNGDMFARYRAMFSLRNRNTEEAALALAEAFNDPNALFKHEVAYVMGQMENPVLVPALKKVLLDETEHRMVRHEAAEALGAIGSTECEEILKQYLKDDVQVVRESCEVALDIMDYW 306
[Close]
BLAST of NO08G01720 vs. NCBI_GenBank
Match: XP_009833536.1 (hypothetical protein H257_09117 [Aphanomyces astaci] >ETV76624.1 hypothetical protein H257_09117 [Aphanomyces astaci])

HSP 1 Score: 206.5 bits (524), Expect = 1.200e-49
Identity = 150/293 (51.19%), Postives = 176/293 (60.07%), Query Frame = 0 
Query:    3 PNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLEKYAQDPVPEVADTCRLSLDLIRWHXXXXXXXXXXXXXXXGSLDKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTTEAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMVRHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYW 296
            P+   LR  L+D+ +P+ KRT A F LRT GG +                                         XXXXXXXXXXXXXXXXXXXXXXXXXXX     ++ D   EVA+TC L+L L+++                  +D++PY SVDPAPA  +  ST ELQA LLD S  +F RYRAMFSLRNRNT +A  ALA  F D+S LFRHE+AYV GQM NP +VPALK VL NE EHRMVRHEAAEALGA+G  ECE IL  +++D   VVRESC VAL I DYW
Sbjct:    5 PSFDQLRASLLDLSEPMGKRTRAVFYLRTRGGKDDLQVLLEALPNKKDSELMRHELAYVIGQFQDVVACPVLEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSHDAALEVAETCALALRLVKY-----KHAGHDASEAADEMDRNPYYSVDPAPAMPKSKSTDELQAILLDTSRSMFDRYRAMFSLRNRNTEDAALALASAFHDTSALFRHEIAYVMGQMANPVTVPALKEVLINEAEHRMVRHEAAEALGAIGTAECEDILKVYLKDAHQVVRESCEVALDIIDYW 292
The following BLAST results are available for this feature:
BLAST of NO08G01720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26777.15.100e-8072.58deoxyhypusine hydroxylase-like protein [Nannochlor... [more]
POM65624.11.200e-5551.88Deoxyhypusine hydroxylase [Phytophthora palmivora ... [more]
OWY97572.12.200e-5443.00Deoxyhypusine hydroxylase [Phytophthora megakarya][more]
XP_009530977.12.800e-5449.83hypothetical protein PHYSODRAFT_514765 [Phytophtho... [more]
CCI45562.17.000e-5353.24unnamed protein product [Albugo candida][more]
CCA20324.11.700e-5150.51deoxyhypusine hydroxylase putative [Albugo laibach... [more]
XP_002903133.16.500e-5153.58deoxyhypusine hydroxylase, putative [Phytophthora ... [more]
XP_008880632.14.200e-5053.92hypothetical protein, variant [Aphanomyces invadan... [more]
ETL31636.17.200e-5053.24hypothetical protein L916_15629 [Phytophthora para... [more]
XP_009833536.11.200e-4951.19hypothetical protein H257_09117 [Aphanomyces astac... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL106nonsL106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR139ngnoR139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008851NSK008851Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01720.1NO08G01720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|663170gene_3500Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g89gene3874Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01720.1NO08G01720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01720 ID=NO08G01720|Name=NO08G01720|organism=Nannochloropsis oceanica|type=gene|length=933bp
ATGGCTCCAAACGTGGCGGCTCTTCGCGACTGCCTGGTCGACGTGCAGCA
GCCAATCCAAAAGCGTACCCACGCTGCCTTTGTTCTGCGTACCGATGGAG
GCTCCGAGGCCGTCGCCGCCATTGGTGAGGCCTTGCGGAACAAGCAAGAC
TCTGCCTTGCTCCGACATGAGCTCGCATACGTCCTGGGCCAGATTCGGGA
CCGGGCCGCCTGCCCTACGCTCGTGGCAGTGCTGTCGGACGAACGCGACG
ACTCGATGGTGCGGCACGAGGCAGCCGAAGCACTGGGTGCGATTGCAGAG
CCGGAGTCAGTGTCGGTTCTGGAGAAATACGCCCAAGACCCTGTGCCTGA
GGTGGCCGACACATGCCGTCTGTCCCTCGACCTGATCCGATGGCACCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAACGACAACAAGAGGGATCATTG
GATAAGAGCCCGTATTTGTCCGTGGACCCCGCTCCGGCAGACAGGCAGGA
TTTGAGCACAGCGGAGCTTCAGGCCCGTTTGCTCGACCCTTCATTGCCTC
TCTTTACTCGATACCGTGCCATGTTCTCCTTGCGGAATCGGAATACGACT
GAGGCAGTGGCAGCGCTGGCGGAGGGCTTCAGGGATTCGAGCCCATTGTT
TCGGCATGAGGTTGCGTACGTGTTCGGGCAGATGCAGAACCCAGCATCAG
TCCCTGCACTGAAGTTGGTGTTGGAGAACGAGCAAGAGCATAGGATGGTG
AGGCATGAGGCGGCTGAGGCGCTGGGAGCTGTGGGGGGAGAGGAGTGTGA
GACAATCTTGGCAAAGTTTATGCAGGATGGGGAGGTGGTGGTGAGGGAGA
GTTGTGTGGTTGCCTTGGGGATTGCGGATTACTGGGTGGGGGGAGGGGGG
GAAGGAGAGTGTGAGGGGGAGGAGGTGATGTAG
back to top

protein sequence of NO08G01720.1

>NO08G01720.1-protein ID=NO08G01720.1-protein|Name=NO08G01720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bp
MAPNVAALRDCLVDVQQPIQKRTHAAFVLRTDGGSEAVAAIGEALRNKQD
SALLRHELAYVLGQIRDRAACPTLVAVLSDERDDSMVRHEAAEALGAIAE
PESVSVLEKYAQDPVPEVADTCRLSLDLIRWHQQQQQQQQQQQRQQEGSL
DKSPYLSVDPAPADRQDLSTAELQARLLDPSLPLFTRYRAMFSLRNRNTT
EAVAALAEGFRDSSPLFRHEVAYVFGQMQNPASVPALKLVLENEQEHRMV
RHEAAEALGAVGGEECETILAKFMQDGEVVVRESCVVALGIADYWVGGGG
EGECEGEEVM*
back to top
Synonyms
Publications