NO08G01710, NO08G01710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01710 vs. NCBI_GenBank
Match: EWM26664.1 (Tetratricopeptide-like helical protein [Nannochloropsis gaditana]) HSP 1 Score: 294.3 bits (752), Expect = 4.300e-76 Identity = 161/292 (55.14%), Postives = 188/292 (64.38%), Query Frame = 0 Query: 1 MEGLDQVLKQGDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSS--SSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLSRQA 291 ME LDQVL++GDS A+L+Y+RH+RIRAS EVVQHG+DFV +GKGSSLG EAWPVYEQVFLAALDLGETLLAE +L LL+K+FPDSARVGRL GM EAEG + AA+VY L YEELVL P+ F+ HVALAE Y +GG ESLRLARKHYAQ+MELH GDDNLR+LYGMC+TCHALAR + S+ D++D+ VN ALF LA DKLK HY R NP++ P VE TL +QA Sbjct: 1 MEELDQVLERGDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTLLQQA 292
BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_002965493.1 (ER membrane protein complex subunit 2 [Selaginella moellendorffii] >EFJ32913.1 hypothetical protein SELMODRAFT_167610 [Selaginella moellendorffii]) HSP 1 Score: 130.6 bits (327), Expect = 8.200e-27 Identity = 88/267 (32.96%), Postives = 119/267 (44.57%), Query Frame = 0 Query: 11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKG-SSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANP 277 GD L IR ++R S++V +HG + + + LG + W VYEQV +AALD A+ + L KKFPDS RVGRLEGM EA G ++QA KVY + YEEL+L PAN FH+ AE IGG E+L+ A+K+YA A+EL GG N+RALYG+C A + + + D + N+ + LA D +K Y P Sbjct: 20 GDVARYLALIRKLKLRRSSKVAKHGMELLRNSSARAKLGADVWTVYEQVAIAALDCQCLTAAKECIGALLKKFPDSTRVGRLEGMWFEARGSWQQAEKVYASILEEHPTDARILKRKIAMAKAQGNLMGAVDEMNKYLELFMADHECWKELADVYLALQMYKQAAFCYEELILVQPANALFHLGYAEILYTIGGLENLKTAKKYYASAIELSGG-KNMRALYGVCLC--AAGINQAKGRNVKDEKENSTVHTLAADVIKREYRLKAP 283
BLAST of NO08G01710 vs. NCBI_GenBank
Match: OQR90687.1 (hypothetical protein ACHHYP_05324 [Achlya hypogyna]) HSP 1 Score: 130.6 bits (327), Expect = 8.200e-27 Identity = 86/257 (33.46%), Postives = 124/257 (48.25%), Query Frame = 0 Query: 16 VLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYT 273 +L++IR ++RA E V+ GR + G LGD+AW VYEQ LAALD+ + L ++ L+KKFP+S+RV RLEGMI EA+G + QA +Y ++ YEEL+L +P + H LAE YV IGG ++LR ARKH+A A+EL+G +N R+L G+ A+A + S D+ D +N+ L A KL+ Y+ Sbjct: 22 LLEFIRREKLRAPDESVKVGRALISRG---GLGDQAWTVYEQTLLAALDIHDLDLVDSCFLALKKKFPESSRVLRLEGMIMEAQGKYAQADALYKEILAKNPANMLVQKRQVALLRAQGRTEDAIVKLNAVLRCFQTDAAGWCELSDLYLSLGNYKHAAFCYEELILLNPLDAFNHTRLAELYVTIGGNDNLRAARKHFAHALELNG--NNTRSLVGLVMCTTAIASTKSGRPDKEDRDLNSRLHQYAVAKLQGVYS 273
BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_002982969.1 (ER membrane protein complex subunit 2 [Selaginella moellendorffii] >EFJ15778.1 hypothetical protein SELMODRAFT_445359 [Selaginella moellendorffii]) HSP 1 Score: 130.2 bits (326), Expect = 1.100e-26 Identity = 88/267 (32.96%), Postives = 119/267 (44.57%), Query Frame = 0 Query: 11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKG-SSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANP 277 GD L IR ++R S++V +HG + + + LG + W VYEQV +AALD A+ + L KKFPDS RVGRLEGM EA G ++QA KVY + YEEL+L PAN FH+ AE IGG E+L+ A+K+YA A+EL GG N+RALYG+C A + + + D + N+ + LA D +K Y P Sbjct: 20 GDVARYLALIRKLKLRRSSKVAKHGMELLRNSSARAKLGADVWTVYEQVAIAALDCQCLTAAKECIGALLKKFPDSTRVGRLEGMWFEARGSWQQAEKVYASILEERPTDARILKRKIAMAKAQGNLMGAVDEMNKYLELFMADHECWKELADVYLSLQMYKQAAFCYEELILVQPANALFHLGYAEILYTIGGLENLKTAKKYYASAIELSGG-KNMRALYGVCLC--AAGINQAKGRNIKDEKENSTVHTLAADVIKREYRLKAP 283
BLAST of NO08G01710 vs. NCBI_GenBank
Match: PSS10194.1 (ER membrane protein complex subunit 2 like [Actinidia chinensis var. chinensis]) HSP 1 Score: 123.2 bits (308), Expect = 1.300e-24 Identity = 84/277 (30.32%), Postives = 128/277 (46.21%), Query Frame = 0 Query: 11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVME-GKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATL 287 G + L +R ++R S +V++HG + E K SSLG E W +YEQV +AA+D +A+ + +LQKKFPDS RVGRLE M+ EA+G + +A K Y L YEEL+LC P N H+A A+ +GG E+L+ A+K+YA ++L GG N RAL+G+C A+ + + + E + + L +LA L++ Y + P+ + +TL Sbjct: 22 GGAWEYLCLVRKLKLRRSDKVLKHGLSILNEPSKRSSLGHEEWTLYEQVAIAAMDCQCLDVAKGCITVLQKKFPDSKRVGRLEAMLLEAKGSWSEAKKAYSSLLEDNALDQVIHKRRAAMEKAQGNLSGAIECLNKYLEIFMADHDAWRELAEIYVSLQMYKQAAFCYEELILCQPTNPLCHLAYADVLYTVGGLENLQAAKKYYASVIDLTGG-MNTRALFGICLCTSAIGQLTKGRNKE--EKESLGLQSLAATALEKDYKQRAPSKLSLLSSTL 295
BLAST of NO08G01710 vs. NCBI_GenBank
Match: PTQ46820.1 (hypothetical protein MARPO_0010s0190 [Marchantia polymorpha]) HSP 1 Score: 121.7 bits (304), Expect = 3.800e-24 Identity = 89/287 (31.01%), Postives = 126/287 (43.90%), Query Frame = 0 Query: 9 KQGDSTAVLKYIRHHRIRASTEVVQHGRDFV-MEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYG--MC-ATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLSRQAA 292 ++ D+ L +R ++R S +V HG + S LGD+ W VYEQV +AA+D +A+ + L KKFPDS RVGRLEGM EA+G ++QA KVY L YEEL+L P N +H+ AE IGG E+LR A+K+Y+ +EL GG N+RALYG +C A + L + + S ++E + +LA LK Y P P + L + A+ Sbjct: 21 RKEDTAQYLSLVRKLKVRRSEKVALHGLALLNSPSAASKLGDDVWTVYEQVAIAAMDCNCLDVAKECITALMKKFPDSNRVGRLEGMWMEAKGYWQQAEKVYESLLEVNATDPFLHKRKVAMAKAQGNFSGAVEALNKYLETFMADHDAWRELAELYISLLMYKQAAFCYEELILAQPTNALYHLGYAELLYTIGGLENLRAAKKYYSATIELSGG-RNIRALYGVVLCGAAINQLLKQTRSRNEEESMEI----VSLASTVLKMEYKSKAPKKLPLLAPLLEKAAS 302
BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_010546605.1 (PREDICTED: ER membrane protein complex subunit 2-like [Tarenaya hassleriana]) HSP 1 Score: 121.3 bits (303), Expect = 5.000e-24 Identity = 82/277 (29.60%), Postives = 127/277 (45.85%), Query Frame = 0 Query: 11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVME-GKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATL 287 G + L +R ++R S +V +HG + + GK S+LG E W +YEQV AA+D +A+ +++LQKKFP+S RVG+LEG++ EA+G +E+A K Y L YEEL+L P +H+A A+ +GG E+L ARK+YA A++L GG N RAL+G+C A+++ S + E L +LA L++ Y + P+ + + L Sbjct: 22 GGAWEYLCLVRKLKVRRSEKVFKHGLSILNDPGKRSALGPEEWTLYEQVATAAMDCQRLDVAQNCIKVLQKKFPESKRVGKLEGLLLEAKGLWEEAEKAYSSLLEDNPLDQVIHKRRVAMAKARGNLSLAIEFLNKYLELFMADHDAWRELAEIYLSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTMGGVENLIAARKYYAAAIDLTGG-RNTRALFGICLCASAISQLSKGRNKEDRDMAAPELQSLAAAALEKEYKQNAPSKLQLLSSAL 297
BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_008619727.1 (hypothetical protein SDRG_15336 [Saprolegnia diclina VS20] >EQC26825.1 hypothetical protein SDRG_15336 [Saprolegnia diclina VS20]) HSP 1 Score: 120.9 bits (302), Expect = 6.500e-24 Identity = 81/256 (31.64%), Postives = 119/256 (46.48%), Query Frame = 0 Query: 16 VLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHY 272 +L+++R ++R VV+ GR V G LGD W ++EQV LAALDLG + +++ L+ KFPDS+RV RLEGMI EA+G + QA +Y D+ YEEL+L +P + H LAE YV IGG ++LR ARKH+A A++L+ + R L G+ A+A + ++ ++ D +NA L A KL+ Y Sbjct: 22 LLEFVRKEKLRVPDVVVKVGRALVARG---GLGDALWTIHEQVLLAALDLGAMDVVDSTFLALKNKFPDSSRVLRLEGMIFEAQGKYAQADALYKDILAKNPANMLVMKRQVSLLRAQGRTEDAISKLNALLRCFQTDAGAWCELSELYLSLGNYKHAAFCYEELILLNPLDALNHTRLAELYVTIGGLDNLRTARKHFAHALDLNA--QSTRGLVGLVMCTTAIASTKTTRPEKDDRELNARLHQFALQKLQSVY 272
BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_010666839.1 (PREDICTED: ER membrane protein complex subunit 2 [Beta vulgaris subsp. vulgaris] >KMS95828.1 hypothetical protein BVRB_004830 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 120.9 bits (302), Expect = 6.500e-24 Identity = 82/278 (29.50%), Postives = 126/278 (45.32%), Query Frame = 0 Query: 11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVME-GKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLS 288 G + L +R +IR S +V++HG + + K S++GDE W +YEQV +AA+D A+ L +L KKFP+S RVGRLE M+ EA+G +E+A K Y L YEEL+L P +H+A A+ +GG E+L+ A+K+YA ++ GG N RALYG+C A+ + + + D + + L +LA L++ Y P P + +TL+ Sbjct: 22 GGAWEYLCLVRKLKIRRSDKVLKHGLSILNDPKKRSAIGDEEWTLYEQVAIAAMDCNSLETAKDCLNVLSKKFPESKRVGRLEAMLLEAKGCWEEAEKAYSSLLEDNPLDQVVHKRKVAMAKAAGDPLKAVEWLNKYLKVFMADNDAWRELAEIYVSLQMYKQAAFCYEELILAQPTVPLYHLAYADVLYTLGGLENLQTAKKYYASTIDFTGG-KNTRALYGVCLCTAAIGQLAKGRN--RDDKESGELHSLAAAVLEKDYKNRAPTKVPLLTSTLT 296
BLAST of NO08G01710 vs. NCBI_GenBank
Match: ETI52067.1 (hypothetical protein F443_04715 [Phytophthora parasitica P1569] >ETK91925.1 hypothetical protein L915_04602 [Phytophthora parasitica] >ETL98511.1 hypothetical protein L917_04434 [Phytophthora parasitica] >ETM51674.1 hypothetical protein L914_04540 [Phytophthora parasitica] >ETO80830.1 hypothetical protein F444_04755 [Phytophthora parasitica P1976]) HSP 1 Score: 119.8 bits (299), Expect = 1.400e-23 Identity = 83/257 (32.30%), Postives = 114/257 (44.36%), Query Frame = 0 Query: 16 VLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYT 273 +L Y+R ++R V G+ V + LGDE W VYEQ F+AALDL + LAET L+ LQ KFP S+RV RLEGM E G+F +A +Y +L YEELVL +P + H LA+ Y IGG ++L ARKHYA ++EL+ NLRA + + A+A +D+ D +N L A D +++ YT Sbjct: 25 LLHYVRKEKLREPRAVASIGKLLVTK-HSWGLGDELWGVYEQTFVAALDLHDDELAETCLKALQTKFPGSSRVARLEGMQLEQRGEFAKALALYAELLEANPANALVLKRKIAVLKAQKKTAEVVTALNEFLKSFGTDQAAWTELGETYLSMGAYRYAAFCYEELVLLNPMDAISHSRLADIYSTIGGLDNLLTARKHYAHSIELN-KKQNLRAYFSLVTCTKAIAAQRGYRADQDDDGINERLQKFALDHIQDFYT 279 The following BLAST results are available for this feature:
BLAST of NO08G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01710 ID=NO08G01710|Name=NO08G01710|organism=Nannochloropsis oceanica|type=gene|length=3158bpback to top protein sequence of NO08G01710.1 >NO08G01710.1-protein ID=NO08G01710.1-protein|Name=NO08G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bpback to top Synonyms
Publications
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