NO08G01710, NO08G01710 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G01710
Unique Name	NO08G01710
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3158
Alignment location	chr8:535773..538930 -

Link to JBrowse

Properties


Property Name	Value
Description	Tetratricopeptide-like helical protein

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:535773..538930 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom
IPR013026	TPR-contain_dom
IPR019734	TPR_repeat

Homology

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: EWM26664.1 (Tetratricopeptide-like helical protein [Nannochloropsis gaditana])

HSP 1 Score: 294.3 bits (752), Expect = 4.300e-76
Identity = 161/292 (55.14%), Postives = 188/292 (64.38%), Query Frame = 0

Query:    1 MEGLDQVLKQGDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSS--SSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLSRQA 291
            ME LDQVL++GDS A+L+Y+RH+RIRAS EVVQHG+DFV +GKGSSLG EAWPVYEQVFLAALDLGETLLAE +L LL+K+FPDSARVGRL GM  EAEG +  AA+VY  L                                                                YEELVL  P+ F+ HVALAE Y  +GG ESLRLARKHYAQ+MELH GDDNLR+LYGMC+TCHALAR +  S+  D++D+ VN ALF LA DKLK HY R NP++ P VE TL +QA
Sbjct:    1 MEELDQVLERGDSVAILRYLRHNRIRASAEVVQHGQDFVAKGKGSSLGIEAWPVYEQVFLAALDLGETLLAERALGLLRKQFPDSARVGRLVGMQAEAEGTYAVAAEVYKSLREAHPTDPVVWKRWVSLAKAQGDLPEAIKRCNEYLKVFQNDSSAWQELAELYLLTGHLGKAAFCYEELVLSGPSIFSHHVALAEVYAAMGGAESLRLARKHYAQSMELHQGDDNLRSLYGMCSTCHALARCTHKSAHEDKSDAAVNGALFKLAVDKLKSHYRRVNPSMLPLVEVTLLQQA 292

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_002965493.1 (ER membrane protein complex subunit 2 [Selaginella moellendorffii] >EFJ32913.1 hypothetical protein SELMODRAFT_167610 [Selaginella moellendorffii])

HSP 1 Score: 130.6 bits (327), Expect = 8.200e-27
Identity = 88/267 (32.96%), Postives = 119/267 (44.57%), Query Frame = 0

Query:   11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKG-SSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANP 277
            GD    L  IR  ++R S++V +HG + +      + LG + W VYEQV +AALD      A+  +  L KKFPDS RVGRLEGM  EA G ++QA KVY  +                                                                YEEL+L  PAN  FH+  AE    IGG E+L+ A+K+YA A+EL GG  N+RALYG+C    A   + +   +  D + N+ +  LA D +K  Y    P
Sbjct:   20 GDVARYLALIRKLKLRRSSKVAKHGMELLRNSSARAKLGADVWTVYEQVAIAALDCQCLTAAKECIGALLKKFPDSTRVGRLEGMWFEARGSWQQAEKVYASILEEHPTDARILKRKIAMAKAQGNLMGAVDEMNKYLELFMADHECWKELADVYLALQMYKQAAFCYEELILVQPANALFHLGYAEILYTIGGLENLKTAKKYYASAIELSGG-KNMRALYGVCLC--AAGINQAKGRNVKDEKENSTVHTLAADVIKREYRLKAP 283

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: OQR90687.1 (hypothetical protein ACHHYP_05324 [Achlya hypogyna])

HSP 1 Score: 130.6 bits (327), Expect = 8.200e-27
Identity = 86/257 (33.46%), Postives = 124/257 (48.25%), Query Frame = 0

Query:   16 VLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYT 273
            +L++IR  ++RA  E V+ GR  +  G    LGD+AW VYEQ  LAALD+ +  L ++    L+KKFP+S+RV RLEGMI EA+G + QA  +Y ++                                                                YEEL+L +P +   H  LAE YV IGG ++LR ARKH+A A+EL+G  +N R+L G+     A+A + S   D+ D  +N+ L   A  KL+  Y+
Sbjct:   22 LLEFIRREKLRAPDESVKVGRALISRG---GLGDQAWTVYEQTLLAALDIHDLDLVDSCFLALKKKFPESSRVLRLEGMIMEAQGKYAQADALYKEILAKNPANMLVQKRQVALLRAQGRTEDAIVKLNAVLRCFQTDAAGWCELSDLYLSLGNYKHAAFCYEELILLNPLDAFNHTRLAELYVTIGGNDNLRAARKHFAHALELNG--NNTRSLVGLVMCTTAIASTKSGRPDKEDRDLNSRLHQYAVAKLQGVYS 273

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_002982969.1 (ER membrane protein complex subunit 2 [Selaginella moellendorffii] >EFJ15778.1 hypothetical protein SELMODRAFT_445359 [Selaginella moellendorffii])

HSP 1 Score: 130.2 bits (326), Expect = 1.100e-26
Identity = 88/267 (32.96%), Postives = 119/267 (44.57%), Query Frame = 0

Query:   11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKG-SSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANP 277
            GD    L  IR  ++R S++V +HG + +      + LG + W VYEQV +AALD      A+  +  L KKFPDS RVGRLEGM  EA G ++QA KVY  +                                                                YEEL+L  PAN  FH+  AE    IGG E+L+ A+K+YA A+EL GG  N+RALYG+C    A   + +   +  D + N+ +  LA D +K  Y    P
Sbjct:   20 GDVARYLALIRKLKLRRSSKVAKHGMELLRNSSARAKLGADVWTVYEQVAIAALDCQCLTAAKECIGALLKKFPDSTRVGRLEGMWFEARGSWQQAEKVYASILEERPTDARILKRKIAMAKAQGNLMGAVDEMNKYLELFMADHECWKELADVYLSLQMYKQAAFCYEELILVQPANALFHLGYAEILYTIGGLENLKTAKKYYASAIELSGG-KNMRALYGVCLC--AAGINQAKGRNIKDEKENSTVHTLAADVIKREYRLKAP 283

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: PSS10194.1 (ER membrane protein complex subunit 2 like [Actinidia chinensis var. chinensis])

HSP 1 Score: 123.2 bits (308), Expect = 1.300e-24
Identity = 84/277 (30.32%), Postives = 128/277 (46.21%), Query Frame = 0

Query:   11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVME-GKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATL 287
            G +   L  +R  ++R S +V++HG   + E  K SSLG E W +YEQV +AA+D     +A+  + +LQKKFPDS RVGRLE M+ EA+G + +A K Y  L                                                                YEEL+LC P N   H+A A+    +GG E+L+ A+K+YA  ++L GG  N RAL+G+C    A+ + +   + E   + +  L +LA   L++ Y +  P+    + +TL
Sbjct:   22 GGAWEYLCLVRKLKLRRSDKVLKHGLSILNEPSKRSSLGHEEWTLYEQVAIAAMDCQCLDVAKGCITVLQKKFPDSKRVGRLEAMLLEAKGSWSEAKKAYSSLLEDNALDQVIHKRRAAMEKAQGNLSGAIECLNKYLEIFMADHDAWRELAEIYVSLQMYKQAAFCYEELILCQPTNPLCHLAYADVLYTVGGLENLQAAKKYYASVIDLTGG-MNTRALFGICLCTSAIGQLTKGRNKE--EKESLGLQSLAATALEKDYKQRAPSKLSLLSSTL 295

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: PTQ46820.1 (hypothetical protein MARPO_0010s0190 [Marchantia polymorpha])

HSP 1 Score: 121.7 bits (304), Expect = 3.800e-24
Identity = 89/287 (31.01%), Postives = 126/287 (43.90%), Query Frame = 0

Query:    9 KQGDSTAVLKYIRHHRIRASTEVVQHGRDFV-MEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYG--MC-ATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLSRQAA 292
            ++ D+   L  +R  ++R S +V  HG   +      S LGD+ W VYEQV +AA+D     +A+  +  L KKFPDS RVGRLEGM  EA+G ++QA KVY  L                                                                YEEL+L  P N  +H+  AE    IGG E+LR A+K+Y+  +EL GG  N+RALYG  +C A  + L + + S ++E    +     +LA   LK  Y    P   P +   L + A+
Sbjct:   21 RKEDTAQYLSLVRKLKVRRSEKVALHGLALLNSPSAASKLGDDVWTVYEQVAIAAMDCNCLDVAKECITALMKKFPDSNRVGRLEGMWMEAKGYWQQAEKVYESLLEVNATDPFLHKRKVAMAKAQGNFSGAVEALNKYLETFMADHDAWRELAELYISLLMYKQAAFCYEELILAQPTNALYHLGYAELLYTIGGLENLRAAKKYYSATIELSGG-RNIRALYGVVLCGAAINQLLKQTRSRNEEESMEI----VSLASTVLKMEYKSKAPKKLPLLAPLLEKAAS 302

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_010546605.1 (PREDICTED: ER membrane protein complex subunit 2-like [Tarenaya hassleriana])

HSP 1 Score: 121.3 bits (303), Expect = 5.000e-24
Identity = 82/277 (29.60%), Postives = 127/277 (45.85%), Query Frame = 0

Query:   11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVME-GKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATL 287
            G +   L  +R  ++R S +V +HG   + + GK S+LG E W +YEQV  AA+D     +A+  +++LQKKFP+S RVG+LEG++ EA+G +E+A K Y  L                                                                YEEL+L  P    +H+A A+    +GG E+L  ARK+YA A++L GG  N RAL+G+C    A+++ S   + E        L +LA   L++ Y +  P+    + + L
Sbjct:   22 GGAWEYLCLVRKLKVRRSEKVFKHGLSILNDPGKRSALGPEEWTLYEQVATAAMDCQRLDVAQNCIKVLQKKFPESKRVGKLEGLLLEAKGLWEEAEKAYSSLLEDNPLDQVIHKRRVAMAKARGNLSLAIEFLNKYLELFMADHDAWRELAEIYLSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTMGGVENLIAARKYYAAAIDLTGG-RNTRALFGICLCASAISQLSKGRNKEDRDMAAPELQSLAAAALEKEYKQNAPSKLQLLSSAL 297

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_008619727.1 (hypothetical protein SDRG_15336 [Saprolegnia diclina VS20] >EQC26825.1 hypothetical protein SDRG_15336 [Saprolegnia diclina VS20])

HSP 1 Score: 120.9 bits (302), Expect = 6.500e-24
Identity = 81/256 (31.64%), Postives = 119/256 (46.48%), Query Frame = 0

Query:   16 VLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHY 272
            +L+++R  ++R    VV+ GR  V  G    LGD  W ++EQV LAALDLG   + +++   L+ KFPDS+RV RLEGMI EA+G + QA  +Y D+                                                                YEEL+L +P +   H  LAE YV IGG ++LR ARKH+A A++L+    + R L G+     A+A + ++  ++ D  +NA L   A  KL+  Y
Sbjct:   22 LLEFVRKEKLRVPDVVVKVGRALVARG---GLGDALWTIHEQVLLAALDLGAMDVVDSTFLALKNKFPDSSRVLRLEGMIFEAQGKYAQADALYKDILAKNPANMLVMKRQVSLLRAQGRTEDAISKLNALLRCFQTDAGAWCELSELYLSLGNYKHAAFCYEELILLNPLDALNHTRLAELYVTIGGLDNLRTARKHFAHALDLNA--QSTRGLVGLVMCTTAIASTKTTRPEKDDRELNARLHQFALQKLQSVY 272

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: XP_010666839.1 (PREDICTED: ER membrane protein complex subunit 2 [Beta vulgaris subsp. vulgaris] >KMS95828.1 hypothetical protein BVRB_004830 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 120.9 bits (302), Expect = 6.500e-24
Identity = 82/278 (29.50%), Postives = 126/278 (45.32%), Query Frame = 0

Query:   11 GDSTAVLKYIRHHRIRASTEVVQHGRDFVME-GKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLS 288
            G +   L  +R  +IR S +V++HG   + +  K S++GDE W +YEQV +AA+D      A+  L +L KKFP+S RVGRLE M+ EA+G +E+A K Y  L                                                                YEEL+L  P    +H+A A+    +GG E+L+ A+K+YA  ++  GG  N RALYG+C    A+ + +   +   D + +  L +LA   L++ Y    P   P + +TL+
Sbjct:   22 GGAWEYLCLVRKLKIRRSDKVLKHGLSILNDPKKRSAIGDEEWTLYEQVAIAAMDCNSLETAKDCLNVLSKKFPESKRVGRLEAMLLEAKGCWEEAEKAYSSLLEDNPLDQVVHKRKVAMAKAAGDPLKAVEWLNKYLKVFMADNDAWRELAEIYVSLQMYKQAAFCYEELILAQPTVPLYHLAYADVLYTLGGLENLQTAKKYYASTIDFTGG-KNTRALYGVCLCTAAIGQLAKGRN--RDDKESGELHSLAAAVLEKDYKNRAPTKVPLLTSTLT 296

[Close]

BLAST of NO08G01710 vs. NCBI_GenBank
Match: ETI52067.1 (hypothetical protein F443_04715 [Phytophthora parasitica P1569] >ETK91925.1 hypothetical protein L915_04602 [Phytophthora parasitica] >ETL98511.1 hypothetical protein L917_04434 [Phytophthora parasitica] >ETM51674.1 hypothetical protein L914_04540 [Phytophthora parasitica] >ETO80830.1 hypothetical protein F444_04755 [Phytophthora parasitica P1976])

HSP 1 Score: 119.8 bits (299), Expect = 1.400e-23
Identity = 83/257 (32.30%), Postives = 114/257 (44.36%), Query Frame = 0

Query:   16 VLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDEAWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEGDFEQAAKVYLDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYEELVLCSPANFAFHVALAEAYVGIGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDETDSRVNAALFNLAGDKLKEHYT 273
            +L Y+R  ++R    V   G+  V +     LGDE W VYEQ F+AALDL +  LAET L+ LQ KFP S+RV RLEGM  E  G+F +A  +Y +L                                                                YEELVL +P +   H  LA+ Y  IGG ++L  ARKHYA ++EL+    NLRA + +     A+A      +D+ D  +N  L   A D +++ YT
Sbjct:   25 LLHYVRKEKLREPRAVASIGKLLVTK-HSWGLGDELWGVYEQTFVAALDLHDDELAETCLKALQTKFPGSSRVARLEGMQLEQRGEFAKALALYAELLEANPANALVLKRKIAVLKAQKKTAEVVTALNEFLKSFGTDQAAWTELGETYLSMGAYRYAAFCYEELVLLNPMDAISHSRLADIYSTIGGLDNLLTARKHYAHSIELN-KKQNLRAYFSLVTCTKAIAAQRGYRADQDDDGINERLQKFALDHIQDFYT 279

The following BLAST results are available for this feature:

BLAST of NO08G01710 vs. NCBI_GenBank

BLAST of NO08G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM26664.1	4.300e-76	55.14	Tetratricopeptide-like helical protein [Nannochlor...	[more]
XP_002965493.1	8.200e-27	32.96	ER membrane protein complex subunit 2 [Selaginella...	[more]
OQR90687.1	8.200e-27	33.46	hypothetical protein ACHHYP_05324 [Achlya hypogyna...	[more]
XP_002982969.1	1.100e-26	32.96	ER membrane protein complex subunit 2 [Selaginella...	[more]
PSS10194.1	1.300e-24	30.32	ER membrane protein complex subunit 2 like [Actini...	[more]
PTQ46820.1	3.800e-24	31.01	hypothetical protein MARPO_0010s0190 [Marchantia p...	[more]
XP_010546605.1	5.000e-24	29.60	PREDICTED: ER membrane protein complex subunit 2-l...	[more]
XP_008619727.1	6.500e-24	31.64	hypothetical protein SDRG_15336 [Saprolegnia dicli...	[more]
XP_010666839.1	6.500e-24	29.50	PREDICTED: ER membrane protein complex subunit 2 [...	[more]
ETI52067.1	1.400e-23	32.30	hypothetical protein F443_04715 [Phytophthora para...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL109	nonsL109	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL106	nonsL106	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR083	ncniR083	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR141	ngnoR141	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR139	ngnoR139	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK008850	NSK008850	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO08G01710.1	NO08G01710.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|582383	gene_3499	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100001g90	gene3873	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO08G01710.1	NO08G01710.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO08G01710 ID=NO08G01710|Name=NO08G01710|organism=Nannochloropsis oceanica|type=gene|length=3158bp
AAAAGGCATATCTCGCGATATCTCCTGAATATGTATATCTTTAATTTCCA
CTTCCTTCTCCATTCAACATCGCCCTTATGCTACATCACCTCCTCCCCCT
CACACTCTCCTTCCCCCCCTCCCCCCACCCAGTAATCCGCAATCCCCAAG
GCAACCACACAACTCTCCCTCACCACCACCTCCCCATCCTGCATAAACTT
TGCCAAGATTGTCTCACACTCCTCTCCCCCCACAGCTCCCAGCGCCTCAG
CCGCCTCATGCCTCACCATCCTATGCTCTTGCTCGTTCTCCAACACCAAC
TTCAGTGCAGGGACTGATGCTGGGTTCTGCATCTGCCCGAACACGTACGC
AACCTCATGCCGAAACAATGGGCTCGAATCCCTGAAGCCCTCCGCCAGCG
CTGCCACTGCCTCAGTCGTATTCCGATTCCGCAAGGAGAACATGGCACGG
TATCGAGTAAAGAGAGGCAATGAAGGGTCGAGCAAACGGGCCTGAAGCTC
CGCTGTGCTCAAATCCTGCCTGTCTGCCGGAGCGGGGTCCACGGACAAAT
ACGGGCTCTTATCCAATGATCCCTCTTGTTGTCGTTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGGTGCCATCGGATCAGGTCGAGGGACAGACGGCA
TGTGTCGGCCACCTCAGGCACAGGGTCTTGGGCGTATTTCTCCAGAACCG
ACACTGACTCCGGCTCTGCAATCGCACCCAGTGCTTCGGCTGCCTCGTGC
CGCACCATCGAGTCGTCGCGTTCGTCCGACAGCACTGCCACGAGCGTAGG
GCAGGCGGCCCGGTCCCGAATCTGGCCCAGGACGTATGCGAGCTCATGTC
GGAGCAAGGCAGAGTCTTGCTTGTTCCGCAAGGCCTCACCAATGGCGGCG
ACGGCCTCGGAGCCTCCATCGGTACGCAGAACAAAGGCAGCGTGGGTACG
CTTTTGGATTGGCTGCTGCACGTCGACCAGGCAGTCGCGAAGAGCCGCCA
CGTTTGGAGCCATTGGAGGATAGGATAGGAGCTGTAATCCAGGGTGTGGA
GGTCAGTGGTGAGCAAGAGAACGTTTGTGAGCGCGCAAATGGACCAACTA
ACCATGTCGTATTTGTTAAGACGTAGATGAGGTGGTCACTGTAATCATGT
CCCTTGTGCATGGCCAGGGACACGGGAGGCCCGCCGGCCTGCCTCCTCGC
TGATAATATAACACTTACAACAGAGAAGGCCCTCCGAGGGGGAGTCCTTC
TTGCCTTCGTCGCCATCATCACGCCTTTGGCCACAGCTTCTGATTGCACC
TACACTACACAACAAAAAGCAGACATAGCATGGAAGGTCTCGACCAAGTG
CTGAAGCAGGGCGACTCGACGGCAGTCCTAAAGTACATACGGCATCATAG
Ggtacgttaataattcatcccctcccgctcgaagttccaccattacatgc
gctgcaacgtcctcccttacgccgccacccatcaacaccacctttagATT
CGTGCATCGACAGAAGTCGTGCAGCATGGGCGAGATTTTGTCATGGAGGG
CAAGGGGAGCAGCCTGGGGGACGAAGgtaggatgagggtctcaagtgggc
aggcttggaggaaggggggaagtgtgacaatttaagtgtgacaatttctg
cttaattgtcctaaacatcccgacctcacaaatgcacagCTTGGCCCGTG
TACGAGCAGGTTTTCCTGGCGGCCTTGGACCTTGGTGAGACGCTGCTGGC
AGAGgtcagtggtgcacgtgagaaaagctctcccttctccagtcttttca
ccccacttttccccgctcgcacaacagACTTCGCTGAGACTTCTACAAAA
GAAATTCCCGGATAGCGCACGGGTTGGACGATTGGAGGGGATGATATGCG
AGGCAGAGGGAGATTTTGAACAGGCTGCAAAGGTGTATCTGGATCTGCGG
GAGCGATACCCTACGGACCCGgtgagttttctttacttggagtgtcagtt
gccgtgggcagaagtaggcgtttcctcctgatttcattgttacagttaaa
gttttctttgtaccgctctcgaggaatttcctcattcgtccctcccccat
caaaacagGTGGTATGGAAGCGGTGGGTGGCTTTGGCCAAGGCCGAGGGG
GACTTGCCCGAGGCGATAAAGCGCTGCAACGAGTATCTCAAGGTCTTCCA
GGGCGACACTAGCGCGgtgagttcgaaaagaaggatgatgatgaaaacgc
aaggagggggcgatgggaatattttgtgcgcttgctggctggaaggcgtc
tcacgcgtcggcaatttttaatttgggagtaaaagagtgtgagggtaatc
aaacggctgcgcatgtatgctttcctcacgagaatctgcgctatatatat
caactcaagtttcatcatacgtacattcgtttccaatcccattattatta
gTGGCAAGAGCTGGCTGCTTTATATGTTCGGACAGGCCACTTACACGAAG
CCGCTTTTTGTTACGAGGAGCTTGTTCTCTGCAGCCCAGCCAATTTTGCC
TTTCACGTTGCATTGGCCGAGGCGTATGTGGGAATAGGCGGAGGCGAATC
TTTGAGGCTAGCACGGAAGCATTACGCGCAGGCGATGGAGTTGCATGGGG
GGGATGATAATTTGCGAGCCCTGTACGGAATGTGTGCGgtgagtctgaga
aagagaggggaatggggagaggttggtagaggaacttgcttggatgcctc
cttcctacttatcgaagctcgttgacgccaagctaggattgtcctccttc
tttcaattctgcctccgtgttgtcctcaaaagcgcttcccccctcttttc
cctttttccttcccttccctactgtcacccccagACATGCCACGCCCTGG
CCCGCAGCAGCAGCAGCGCAAGCGACGAAACAGACAGCCGTGTCAATGCT
GCCCTTTTCAATCTGGCGGGGGACAAGCTCAAGGAACACTACACACGGGC
TAACCCTGCCCTCTTCCCCTTCGTTGAAGCCACGCTTTCCCGGCAAGCCG
CGGATGTGTGTTAGTGACCGCATAGATGTAGAAATGCCTGCGAGAACAAT
TCAGACAAGGAGAAAGGGAAATGAAGAAAGAAACAAAAATGAAATTCGTT
AGTTTTGG

protein sequence of NO08G01710.1

>NO08G01710.1-protein ID=NO08G01710.1-protein|Name=NO08G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=295bp
MEGLDQVLKQGDSTAVLKYIRHHRIRASTEVVQHGRDFVMEGKGSSLGDE
AWPVYEQVFLAALDLGETLLAETSLRLLQKKFPDSARVGRLEGMICEAEG
DFEQAAKVYLDLRERYPTDPVVWKRWVALAKAEGDLPEAIKRCNEYLKVF
QGDTSAWQELAALYVRTGHLHEAAFCYEELVLCSPANFAFHVALAEAYVG
IGGGESLRLARKHYAQAMELHGGDDNLRALYGMCATCHALARSSSSASDE
TDSRVNAALFNLAGDKLKEHYTRANPALFPFVEATLSRQAADVC*

Synonyms

Publications