NO08G01690, NO08G01690 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G01690 vs. NCBI_GenBank
Match: EWM26707.1 (hypothetical protein Naga_100001g92 [Nannochloropsis gaditana]) HSP 1 Score: 210.7 bits (535), Expect = 4.300e-51 Identity = 117/196 (59.69%), Postives = 141/196 (71.94%), Query Frame = 0 Query: 7 ILFVSTAAVQAFQPPSFFLARAR--TRDASMTMRRVTPHGADTSDRRSLIQNQIFLLGGSAAIMSYLPSAVKADSTGKYSTKQTAKKRYLPRVRRGVALFAALGKTLDKPETIQAFCMYVDDNMGTAMALYGSSTRIGELPDPKSRTVDKEVEDFVKEIKALAKGGDVNATYERAKASLIAYLAGTKLEPLGDVAY 201 +L AVQAF PSF + R ++T+ T+DRR I++Q+ L G A +++ P ADSTGKYSTKQTAKKRYLPRVR+GVA F ALG+TLD PETI+AF YV+D++ A+ALYGSSTRIGELPDPKSRTV+KE EDFVKE+ A+AKGGDV A+YE AK +L AYLAGTKLEPL D Y Sbjct: 7 LLLAMATAVQAFW-PSFIAVKQSFCRRKEALTLCAF----KGTADRRDHIRSQVALGGLGALLLAANPPLALADSTGKYSTKQTAKKRYLPRVRKGVAKFQALGETLDNPETIKAFNQYVEDSLAAALALYGSSTRIGELPDPKSRTVEKEAEDFVKEVNAMAKGGDVKASYEGAKTALAAYLAGTKLEPLSDPVY 197
BLAST of NO08G01690 vs. NCBI_GenBank
Match: CBN74262.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 90.5 bits (223), Expect = 6.500e-15 Identity = 56/136 (41.18%), Postives = 78/136 (57.35%), Query Frame = 0 Query: 75 VKADSTGKYSTKQTAKKRYLPRVRRGVALFAALGKTLDKPETIQAFCMYVD--DNMGTAMALYGSSTRIGELPDPKSRTVDKEVEDFVKEIKALA-----KGGDVNAT--YERAKASLIAYLAGTKLEPLGDVAYN 202 V ADSTGKYS+K TA+KRYLPR+ + V F L K + +VD + +AM LYGSS + GE PD KSR + + +DF ++ KGG+ A+ Y++A + L+ YL G +L+PLG YN Sbjct: 115 VFADSTGKYSSKATARKRYLPRIVKLVNAFQMLKKDIASGSASPKSEFFVDVLADSVSAMDLYGSSMKKGETPDSKSRALQQLAQDFGSTCTSIGKSLGKKGGEEEASKAYDKASSILVKYLEGVELDPLGSDVYN 250
BLAST of NO08G01690 vs. NCBI_GenBank
Match: XP_005832091.1 (hypothetical protein GUITHDRAFT_109155 [Guillardia theta CCMP2712] >EKX45111.1 hypothetical protein GUITHDRAFT_109155 [Guillardia theta CCMP2712]) HSP 1 Score: 69.3 bits (168), Expect = 1.600e-8 Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = 0 Query: 71 LPSAVKADSTGKYSTKQTAKKRYLPRVRRGVALFAALGKTLDKPETIQAFCMYVDDNMGTAMALYGSSTRIGELPDPKSRTVDKEVEDFVKEIKALAKGGDVNATYERAKASLIAY 187 LP+ ADSTGK+S+K+TAK RY+PRV++G+ + + E + + ++ +M AM LYG + + E+PD S ++K+ E F + IKA D+ + KAS Y Sbjct: 32 LPTYAFADSTGKFSSKRTAKNRYVPRVKKGLEIMDGIESGRATIEQL----LEIEPDMVNAMKLYGDAQKKSEVPDKISIRLNKDAEAFSQAIKAAGSNADI----AKVKASWQTY 139
BLAST of NO08G01690 vs. NCBI_GenBank
Match: CEL93463.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 68.6 bits (166), Expect = 2.700e-8 Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 0 Query: 66 AIMSYLPSAVKADSTGKYSTKQTAKKRYLPRVRRGVALFAALGKTLDKP--ETIQAFCMYVDDNMGTAMALYGS-STRIGELPDPKSRTVDKEVEDFVK---EIKALAKGGDVNA---TYERAKASLIAYLAGTKLEPLGDVAY 201 A+++ ADSTG+YS+ TAKKRYLPR+ RG++ FA+L ++ + + F +M A+ LY + + + GE D KS ++F K E+++ K D A Y A+ L +YL+ +L P+GD Y Sbjct: 72 AVLTAASLPAVADSTGRYSSIATAKKRYLPRINRGISEFASLKGEVNGGGFDGVSTFLTSRAPDMVAALDLYATGALKKGEYLDKKSLGAKGAADEFTKHVDEMRSAVKAKDKEALKTAYLAAEEDLTSYLSIGELPPIGDATY 215 The following BLAST results are available for this feature:
BLAST of NO08G01690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01690 ID=NO08G01690|Name=NO08G01690|organism=Nannochloropsis oceanica|type=gene|length=618bpback to top protein sequence of NO08G01690.1 >NO08G01690.1-protein ID=NO08G01690.1-protein|Name=NO08G01690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=206bpback to top Synonyms
Publications
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