NO08G01680, NO08G01680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01680 vs. NCBI_GenBank
Match: EWM26601.1 (protein of unknown function DUF4033 [Nannochloropsis gaditana]) HSP 1 Score: 359.0 bits (920), Expect = 1.300e-95 Identity = 178/246 (72.36%), Postives = 198/246 (80.49%), Query Frame = 0 Query: 28 PTSSPVPPRHVLS---LQRRGPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAKAASETSPNCHQIDV 271 P++ + P+ +++ LQRRGP DA P Y RP D LLY FFR KLVQQLGG DTASKDFAGLI+LIRKLNTHF A+GK GTQ AAQNILRSLFPSWLP AFAVMFSKP PAFSARMNA IT LTT+WLMGESEIIDV LLVKRCRYLEEAGCAS+CVNTCKIPTQNFFC+DMGLPLTMTPDYDDFSC F+FGLTPP + +D+AM+VACFSQCPTAKA + NCHQI++ Sbjct: 111 PSARDISPQTLITATRLQRRGPIDAPPEY--GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHQIEL 354
BLAST of NO08G01680 vs. NCBI_GenBank
Match: XP_005855116.1 (hypothetical protein NGA_2097720, partial [Nannochloropsis gaditana CCMP526] >XP_005855241.1 hypothetical protein NGA_2097710, partial [Nannochloropsis gaditana CCMP526] >EKU21119.1 hypothetical protein NGA_2097710, partial [Nannochloropsis gaditana CCMP526] >EKU21244.1 hypothetical protein NGA_2097720, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 354.8 bits (909), Expect = 2.400e-94 Identity = 176/246 (71.54%), Postives = 197/246 (80.08%), Query Frame = 0 Query: 28 PTSSPVPPRHVLS---LQRRGPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAKAASETSPNCHQIDV 271 P++ + P+ +++ LQRRGP DA P Y RP D LLY FFR KLVQQLGG DTASKDFAGLI+LIRKLNT F A+GK GTQ AAQNILRSLFPSWLP AFAVMFSKP PAFSARMNA IT LTT+WLMGESEIIDV LLVKRCRYLEEAGCAS+CVNTCKIPTQNFFC+DMGLPLTMTPDYDDFSC F+FGLTPP + +D+AM+VACFSQCPTAKA + NCH+I++ Sbjct: 41 PSARDISPQTLIAATRLQRRGPIDAPPEY--GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTQFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTGELSNCHEIEL 284
BLAST of NO08G01680 vs. NCBI_GenBank
Match: CBN79781.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 239.6 bits (610), Expect = 1.100e-59 Identity = 121/248 (48.79%), Postives = 164/248 (66.13%), Query Frame = 0 Query: 28 PTSSPVPPRHVLSLQRRGPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQ-DTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAKAASETS----PNCHQIDV 271 P + PP V+ R GPTDA P YD+ RP D++L FR KL +++GG D + GL+ +I+ LN F K TQ A++ +L+SLFPSWLP +FAVMFSKP PAFS+R+NA++T + + WLMG S++ D+ LLV+RCR+LE AGCASVC+NTCK+PT+ FF +DMGL L MTP+Y+DFSC+FSF TP + + D+A +VACF QCP+ A + + CHQID+ Sbjct: 71 PADAAKPPLKVIR-GRAGPTDATPTYDDT---RPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKF--PSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDI 312
BLAST of NO08G01680 vs. NCBI_GenBank
Match: XP_001702558.1 (predicted protein [Chlamydomonas reinhardtii] >PNW77197.1 hypothetical protein CHLRE_10g426350v5 [Chlamydomonas reinhardtii] >PNW77198.1 hypothetical protein CHLRE_10g426350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 222.2 bits (565), Expect = 1.900e-54 Identity = 117/245 (47.76%), Postives = 159/245 (64.90%), Query Frame = 0 Query: 26 TPPTSSPVPPRHVLSLQRRGPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAKAASETSPNCHQIDV 271 T +S+P P +L++ GP DA P Y + +P + ++ FR K+V+ L G D+ + +I L RKLNT F A TQ A + IL +LFPSWLP AF VMFS+PLP FS R+NA T++T WLMG ++ DV +LV+RCRYLE+AGCASVC+N+CK+PTQ+FF +DMGLPLTMTP+YDDFSC+FSFG TP ++ D A CF+QCP+ ++ +P C I++ Sbjct: 34 TRVSSAPGAPSPA-NLRQAGPVDAAPDY-KPIDSQPLNIIVMALFRRKMVEAL-GSDSKLSGYDAIIDLTRKLNTKFRTA--AETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRS---RTPVCGGIEL 270
BLAST of NO08G01680 vs. NCBI_GenBank
Match: PRW44471.1 (Peptide-N4-N-acetyl-beta-D-glucosaminylaspar agine amidase F precursor [Chlorella sorokiniana]) HSP 1 Score: 217.2 bits (552), Expect = 6.100e-53 Identity = 109/212 (51.42%), Postives = 141/212 (66.51%), Query Frame = 0 Query: 45 GPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAK 257 GP+ P Y + + +P ++ +Y FR ++V +G D++ + + +I L R+LN H T + GTQ +NILRSLFP WLP AFAVMFSKP+P S ++NA+ T LT WLMGE E+ DV +LVKRCRYLEEAGCAS+C+N+CK+PTQ FF DMGL L M P+YDDFSC+FSFG TPP +D A CF QCPTA+ Sbjct: 72 GPSSLPPDY-SAIDEQPLNRAVYGLFRRRMVAAIGA-DSSLQGYDAIIDLTRRLNA-MHPTPR-GTQETTRNILRSLFPPWLPGAFAVMFSKPMPGLSCQLNAWATWLTCQWLMGECEVNDVEIDGGRVGKGHGVLVKRCRYLEEAGCASICINSCKVPTQEFFARDMGLALEMKPNYDDFSCQFSFGKTPPPEADDPAFATPCFQQCPTAR 279
BLAST of NO08G01680 vs. NCBI_GenBank
Match: XP_013898180.1 (hypothetical protein MNEG_8803 [Monoraphidium neglectum] >KIY99160.1 hypothetical protein MNEG_8803 [Monoraphidium neglectum]) HSP 1 Score: 216.5 bits (550), Expect = 1.000e-52 Identity = 107/227 (47.14%), Postives = 146/227 (64.32%), Query Frame = 0 Query: 30 SSPVPPRHVLSLQRRGPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAK 257 + P+ L++ GP P Y + +P ++++ FR K+V+ + G D+ + + +I L R+LN + TQLA + IL SLFPSWLP AF VMFS PLPAFS R+NA T+LT WLMG ++ DV +LV+RCRYLEEAGCAS+C+N+CK+PTQ FF +DMGLPLTMTP+Y+DFSC+F+FG TP +D+A CF+QCP+ K Sbjct: 51 AGPLDGAAATQLRQAGPGTPAPSY-AEIDAQPLNRVVMALFRRKMVESI-GSDSQLQGYPAIIDLTRRLNRQYQTA--RDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSKK 273
BLAST of NO08G01680 vs. NCBI_GenBank
Match: XP_002176663.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51126.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 213.0 bits (541), Expect = 1.100e-51 Identity = 108/198 (54.55%), Postives = 132/198 (66.67%), Query Frame = 0 Query: 59 GRPQDQLLYTFFREKLVQQLGGQDTASK--DFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPT 255 GR D L FR KL +GG D++ DF G+I L +N F + GK + AAQ +LR LFPSW+P ++AV+FSKP PAFS+RMNA+ T + WLMGE EI DV LLVKRCR+LEE+GCAS+CVN+CKIPTQNFF +DMGLPLTM P+Y+ F C+FSFG TP S E DA C S+CPT Sbjct: 100 GRWMDLLFLRVFRRKLAGHVGGADSSRNVTDFMGIIDLAAAMNRRF-SQGKIHS--AAQQVLRELFPSWMPGSYAVLFSKPFPAFSSRMNAWATKVAGTWLMGECEINDVVVDGGEVGEGQGLLVKRCRFLEESGCASICVNSCKIPTQNFFAQDMGLPLTMEPNYETFECQFSFGRTPDSSTELDAKSTPCLSRCPT 294
BLAST of NO08G01680 vs. NCBI_GenBank
Match: PNW77196.1 (hypothetical protein CHLRE_10g426350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 211.1 bits (536), Expect = 4.400e-51 Identity = 105/201 (52.24%), Postives = 137/201 (68.16%), Query Frame = 0 Query: 70 FREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAKAASETSPNCHQIDV 271 FR K+V+ L G D+ + +I L RKLNT F A TQ A + IL +LFPSWLP AF VMFS+PLP FS R+NA T++T WLMG ++ DV +LV+RCRYLE+AGCASVC+N+CK+PTQ+FF +DMGLPLTMTP+YDDFSC+FSFG TP ++ D A CF+QCP+ ++ +P C I++ Sbjct: 4 FRRKMVEAL-GSDSKLSGYDAIIDLTRKLNTKFRTA--AETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRS---RTPVCGGIEL 198
BLAST of NO08G01680 vs. NCBI_GenBank
Match: XP_005647503.1 (hypothetical protein COCSUDRAFT_15824 [Coccomyxa subellipsoidea C-169] >EIE22959.1 hypothetical protein COCSUDRAFT_15824 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 208.4 bits (529), Expect = 2.800e-50 Identity = 102/215 (47.44%), Postives = 143/215 (66.51%), Query Frame = 0 Query: 40 SLQRRGPTDAMPVYDNNWNGRPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPT 255 S + GP P Y+ + + +P ++ + + FR+K+V + G+++ + + ++ L R LN+ ++ TQ+ + IL SLFPSWLP AF VMFSKP+P S ++NA++T LT WLMG ++ DV +LV+RCRYLEE GCASVC+N+CKIPTQ FF +DMGLPLTMTP+Y+DFSC+FSFGLTP D+A CFSQCP+ Sbjct: 4 SFSKAGPETPAPSYE-SIDSQPLNRAIMSLFRQKMVAAI-GKNSDKEGYDAIVDLTRLLNS--KSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPS 214
BLAST of NO08G01680 vs. NCBI_GenBank
Match: PNH12456.1 (hypothetical protein TSOC_000599 [Tetrabaena socialis]) HSP 1 Score: 207.6 bits (527), Expect = 4.800e-50 Identity = 101/210 (48.10%), Postives = 139/210 (66.19%), Query Frame = 0 Query: 60 RPQDQLLYTFFREKLVQQLGGQDTASKDFAGLIQLIRKLNTHFHATGKAGTQLAAQNILRSLFPSWLPRAFAVMFSKPLPAFSARMNAYITSLTTFWLMGESEIIDVXXXXXXXXXXXXLLVKRCRYLEEAGCASVCVNTCKIPTQNFFCEDMGLPLTMTPDYDDFSCKFSFGLTPPSMEEDDAMKVACFSQCPTAKAASETSPNCHQID 270 +P ++++ FR K+V + G D+ + +I L R+LN F A TQ A ++IL +LFPSWLP AF VMF++PLP S RMNA T+LT WLMG ++ DV +LV+RCRYLE+AGCA+VC+N+CK+PTQ+FF +DMGL LTMTP+YDDFSC+F+FG TP + D+A +CF+QCP+ KA +C I+ Sbjct: 180 QPLNKIVMALFRRKMVAAV-GSDSPLSGYDAIIDLTRRLNNKFRTA--AETQEATRSILIALFPSWLPGAFKVMFARPLPELSCRMNALATALTCQWLMGPCKVNDVETDDGTVGEGHGVLVERCRYLEQAGCAAVCINSCKVPTQSFFAKDMGLALTMTPNYDDFSCQFAFGKTPLPVSADEAYTTSCFAQCPSKKARRNQQSSCGGIE 386 The following BLAST results are available for this feature:
BLAST of NO08G01680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01680 ID=NO08G01680|Name=NO08G01680|organism=Nannochloropsis oceanica|type=gene|length=813bpback to top protein sequence of NO08G01680.1 >NO08G01680.1-protein ID=NO08G01680.1-protein|Name=NO08G01680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=271bpback to top Synonyms
Publications
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