NO08G01620, NO08G01620 (gene) Nannochloropsis oceanica

Overview
NameNO08G01620
Unique NameNO08G01620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1728
Alignment locationchr8:505424..507151 -

Link to JBrowse

Properties
Property NameValue
DescriptionUAA transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:505424..507151 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004853Tpt_PEP_trans_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO08G01620 vs. NCBI_GenBank
Match: EWM26587.1 (UAA transporter [Nannochloropsis gaditana])

HSP 1 Score: 579.3 bits (1492), Expect = 8.400e-162
Identity = 291/381 (76.38%), Postives = 323/381 (84.78%), Query Frame = 0
Query:    1 MDFLPPHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMRAVDKPLGADEFFKLGYQMEMDEYD--SKEVLKGAGSIEAVPLIMSTEG------GRNGGEKQVPVGAV 374
            MDFLP HLRVP AVASYSVCSGTMLLFNKLAM+YVPVPS VTV+QLL AV IIL LQ + ++PPDPLESS+VKPYL+YT+AFVLGVYCNMRAL+HSNVETVIIFRSCTPLAV+LCD++FLGRELPS+RSCLALLTIA GAYGYVQTDSQFKMDGLAAY+WAILYFVTICFEMTYGKKITSG+RFNSMWGPTFYTNFLSV PMF LGYLMGDF+DFS  EG  G  G E W WT  G+VML VSS++GTLIGYT WSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGI ALVLCL+GGSFY+QAPMR  D+ L + EFF +G ++E DE     +E       ++ VPLI+STEG      G    ++Q P GAV
Sbjct:    1 MDFLPAHLRVPLAVASYSVCSGTMLLFNKLAMHYVPVPSLVTVIQLLSAVVIILSLQWVRVIPPDPLESSKVKPYLLYTIAFVLGVYCNMRALAHSNVETVIIFRSCTPLAVALCDYVFLGRELPSQRSCLALLTIALGAYGYVQTDSQFKMDGLAAYTWAILYFVTICFEMTYGKKITSGIRFNSMWGPTFYTNFLSVTPMFLLGYLMGDFKDFSAAEGTRGSQGAELWKWTTAGVVMLVVSSLMGTLIGYTSWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGIMALVLCLIGGSFYKQAPMRPTDRSLNSIEFFAMGTELEKDELAEVEREANAKITELDTVPLIVSTEGKKLAFFGHQADDRQAPAGAV 381          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: XP_002288871.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94307.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 286.6 bits (732), Expect = 1.100e-73
Identity = 149/308 (48.38%), Postives = 201/308 (65.26%), Query Frame = 0
Query:    6 PHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            P  +   AVA+YS CSG+++L NKL ++ +P PS V   QL   +  I +    H++  DP++   +KPYL YTVAF LGVYCNM++LS SNVETVI+FR+  PL VS+ D +FLGRE PS RS +AL  IA GAYGY  TD  F+  GL AY W   Y + I FEM YGKKI S V   +  GP  YTN L   PM    Y+ G++  F      +     +  +++   +V++ +  +VGT IGY+GW CRS VSA ++TL+GV+NK +T+L+N+ IWD+HA+  GI++L LCLVGG+FY QAPMR
Sbjct:    7 PKTQTALAVAAYSFCSGSLVLVNKLILHQLPYPSLVITFQLWATLFFIQIGDAFHVLDVDPIKWKCIKPYLAYTVAFSLGVYCNMKSLSMSNVETVIVFRALAPLLVSVLDAMFLGREWPSARSWVALSVIAVGAYGYALTDEAFQTQGLIAYLWPTAYLIVISFEMAYGKKIISAVELKTRTGPVLYTNMLGWPPMLGFAYMGGEYGRF--YNDLTDRAVRDEPLFSTSAVVLMLLGCIVGTGIGYSGWWCRSKVSAASYTLIGVLNKCLTVLVNLMIWDQHAAVEGIASLSLCLVGGAFYAQAPMR 312          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: XP_014160418.1 (hypothetical protein SARC_01346 [Sphaeroforma arctica JP610] >KNC86516.1 hypothetical protein SARC_01346 [Sphaeroforma arctica JP610])

HSP 1 Score: 283.1 bits (723), Expect = 1.200e-72
Identity = 141/309 (45.63%), Postives = 208/309 (67.31%), Query Frame = 0
Query:    5 PPHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            P    +  A+ +YS+CSGT+LL NK+ ++++P+P+ +T+ QL+ A+ I+  ++ L +   +  +  ++ PY  YT+AFV G+Y NMRAL   NVETVI+FR+ TPLAVS  DF  LGRE PS RS +++++I  GA  YV  D +F ++G AAY+W I+YF+ IC EMTYGKK+ S V   ++ G   YTN L++ P     +L     + S++   + +       W  +G V+L  S VVG  IGY+GW+CR  VSAT+FT++GVINKF+T++LN+ IWDKHAS + +  L++CLV GSFY+QAP+R
Sbjct:    5 PTKNEIVFAIVAYSLCSGTLLLLNKVVLHFIPLPALITLCQLVMAICIVYGIKTLKLAEVNEFDLEKLVPYAYYTIAFVSGIYANMRALQTCNVETVIVFRALTPLAVSFLDFACLGRESPSARSMISMISIVIGAAVYVSDDMEFAVEGTAAYTWVIIYFLAICAEMTYGKKLVSDVDL-TLSGSVLYTNTLAILPFL---FLFLSTSELSVLTTQAPVES-----WPFLGWVVLVASGVVGAGIGYSGWNCRHKVSATSFTIIGVINKFLTVMLNIIIWDKHASTISLCGLIICLVAGSFYRQAPLR 304          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: GAX21958.1 (hypothetical protein FisN_16Hh051 [Fistulifera solaris])

HSP 1 Score: 282.3 bits (721), Expect = 2.100e-72
Identity = 147/310 (47.42%), Postives = 197/310 (63.55%), Query Frame = 0
Query:    4 LPPHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            + P++ V  +V +YS CSGT++L NKL ++ +P PS V   QL+ AV  I        +P DPL+   V PYL Y +AF LGVYCNM++LS SNVETV++FR+ +P  V++ D +FLGRE PSRRS +AL  I  GA  Y   D+QF+  G +AY W   Y + ICFEM YGKKI   V   +  GP  YTN L + PM C   L G++  F      +  GG    + +   +++L +  V GT IG++ W CR  VSAT+FTL+GV+NK +TILLN  IWD+HA+P G+  L LCLVGGS YQQ+P+R
Sbjct:    1 MKPNVEVTLSVLAYSACSGTLVLLNKLILHRLPYPSLVVSFQLVVAVAFIYAAHSAGRLPVDPLQWEYVVPYLYYIIAFSLGVYCNMKSLSLSNVETVVVFRALSPCLVAVLDVLFLGREYPSRRSWMALSLIVLGAVFYASFDAQFQTQGWSAYLWPTAYLLIICFEMCYGKKIIQSVDLKTKAGPVLYTNLLGLPPMLCFAALGGEYGQF------AAAGGFSQILSSFSSMLLLFLGCVAGTGIGFSSWWCRDQVSATSFTLIGVLNKCLTILLNCLIWDQHAAPGGLLGLCLCLVGGSLYQQSPLR 304          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: OEU20539.1 (hypothetical protein FRACYDRAFT_274221 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 275.8 bits (704), Expect = 2.000e-70
Identity = 142/310 (45.81%), Postives = 194/310 (62.58%), Query Frame = 0
Query:    4 LPPHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            L P   + A+V +YS CSGT++L NKL ++++P PS V   QLL  + ++   +   ++  DP++   VKPYL+Y + F  GVYCNMR+L+ SNVETVI+FR+ +P+ V+  D +FLGRE PS RS   L+T+  GAYGY   D QF+  G  AYSW   Y + I  EM YGKKI   V   +  GP  YTN +   PM  L  + G++  F           G+      + +++L + SVVGT IGY+GW CR +VSAT+FTL+GV+NK +T+LLN  IWD+HA P GI  L LC+ GG  Y+QAPMR
Sbjct:    3 LNPQQTIIASVLAYSFCSGTLVLLNKLTLHFLPFPSLVVSFQLLACIILVYGAKFAGLINVDPIKWEYVKPYLLYILFFSTGVYCNMRSLNISNVETVIVFRALSPILVAFLDALFLGREWPSPRSWAGLITLVIGAYGYASFDEQFQTQGYGAYSWPTAYTIIIALEMAYGKKIVKSVPLATTSGPVIYTNLIGFVPMLLLANVGGEYSKF-----WDYFWAGDNQRLPPLAILLLVLGSVVGTGIGYSGWWCRGVVSATSFTLIGVMNKCLTVLLNTLIWDQHAKPGGIFCLFLCIAGGMIYKQAPMR 307          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: GAX26224.1 (hypothetical protein FisN_16Lh051 [Fistulifera solaris])

HSP 1 Score: 273.5 bits (698), Expect = 9.900e-70
Identity = 146/310 (47.10%), Postives = 196/310 (63.23%), Query Frame = 0
Query:    4 LPPHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            + P++ V  +V +YS CSGT++L NKL ++ +P PS V   QL+ AV  I        +  DPL+   V PYL Y +AF LGVYCNM++LS +NVETV++FR+ +P  V++ D +FLGRE PSRRS  AL  I  GA  Y   D+QF+  G +AY W   Y + ICFEM YGKKI   V   +  GP  YTN L + PM C   + G++  F      +  GG +   ++ M  ++L +  V GT IG++ W CR  VSAT+FTL+GV+NK +TILLN  IWD+HA+P G+  L LCLVGGS YQQ+PMR
Sbjct:    1 MKPNVEVTLSVLAYSACSGTLVLLNKLILHRLPYPSLVVSFQLVVAVAFIYAANFAGRLQVDPLQWEYVVPYLYYIIAFSLGVYCNMKSLSLANVETVVVFRAMSPCLVAVLDVLFLGREYPSRRSWGALSLIVLGAIFYASFDTQFQTQGWSAYRWPTAYLLIICFEMCYGKKIIQSVDLKTKAGPVLYTNLLGLPPMLCFAAMGGEYGQF------ASEGGVQQISFSLM--LLLFLGCVAGTGIGFSSWWCRDQVSATSFTLIGVLNKCLTILLNCLIWDQHAAPGGLLGLCLCLVGGSLYQQSPMR 302          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: KOO27101.1 (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 270.8 bits (691), Expect = 6.400e-69
Identity = 136/306 (44.44%), Postives = 198/306 (64.71%), Query Frame = 0
Query:    8 LRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            L +  A+  Y +CS  ML+ NKLA+++VP+P FVT  Q      ++  ++   ++  D  E ++VK Y++Y ++F +G Y NM+ LS +NVETVI+FRSCTPLAV++ D+IF  R  PS RSC +LL I  GA  Y+ TD +F+++G AAY W ++++  + F++TYGK + SG+   S+W P  YTN LS+ P   L  + G+  +  L +         A+ W       L  S  +G  I Y+G+ C+ LVSATT+T+VGV+NK +T+++NV IWDKHAS  GI ALVLCLVGGS YQQ+P+R
Sbjct:    9 LEMTTAIIFYCICSAGMLIVNKLAVHHVPMPGFVTSCQFSTCAALVYGMKLCGVLVADDFEWAKVKYYIIYVLSFSIGTYTNMKVLSMANVETVIVFRSCTPLAVAIFDYIFYNRAAPSARSCFSLLLITTGAIAYILTDREFQVNGWAAYYWVMIWWFVLVFQLTYGKFLVSGIPIASLWTPVLYTNSLSILPALGLCLVAGELDESRLAKVDL---NSAAYFW-------LGASCFIGMSISYSGFWCQQLVSATTYTVVGVMNKMLTVMVNVVIWDKHASSYGIGALVLCLVGGSLYQQSPLR 304          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: KOO34987.1 (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 267.7 bits (683), Expect = 5.400e-68
Identity = 142/315 (45.08%), Postives = 201/315 (63.81%), Query Frame = 0
Query:    8 LRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQF------KMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMRAVD 317
            + V A VA Y  CSG ML+ NKLA++++  P+FVTVVQ +     ++       +  D LE  +VK ++VY +AF  G + NM+ L  +NVET+I+FRSC P+ VS+ D+IF  R LPSRRSCLA++ I  GA  YV  DS+       +    AAY+W  ++FV + F++TYGK + SG+   S+W P  YTN L++AP   +G + GDF+  +  +            WT   L MLA+S V G  I ++G+ C+S+V+AT +T+VGV+NK +T+L+NV IWDKHASP GI+AL +CL GGS YQQAP+R  D
Sbjct:    3 MSVGAIVAFYCFCSGGMLVLNKLAVHHIHAPAFVTVVQFVATAVGVMAGWACGALELDTLEWRKVKHFVVYILAFSGGTWANMKVLMVANVETIIVFRSCAPICVSVLDYIFYNRALPSRRSCLAMVLIVLGASAYVALDSKSGQTLAERETQQAAYTWVAVWFVLLIFQLTYGKTLVSGLGLQSIWSPVLYTNALAIAPTALIGVVAGDFEALATTD------------WTLQALGMLALSCVAGIGISWSGFKCQSVVTATAYTVVGVMNKLLTVLINVLIWDKHASPGGIAALCVCLGGGSLYQQAPLRRQD 305          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: KOO24007.1 (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 263.1 bits (671), Expect = 1.300e-66
Identity = 137/301 (45.51%), Postives = 191/301 (63.46%), Query Frame = 0
Query:   13 AVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKIT-SGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPM 313
            A+  +S+ S ++L+ NK+ ++ +P+PSF+++ Q + A    + L  L  VP +P E  +VKPY +Y   FV  +YCNMRAL +SNVETVIIFR+C PL V   ++ F+GR LPS RSCLALLT+  G  GYV TD  F+++G AAYSWA  YFV I  EM +GK I    + F S WGPT YTN +S+ PM  +G +  +            L   EA  W+     +L +S ++G  I Y G+  R+LV+AT +T++GV NK  T+L+NV +WD+HAS  GI  L +CL+G S Y+QAPM
Sbjct:   15 AMLLFSIASSSLLIVNKVCLHVLPLPSFISLAQFVTAALTSMALMALGYVPLEPWEWRKVKPYCIYVAMFVATIYCNMRALQYSNVETVIIFRACCPLVVCYLEWAFMGRALPSARSCLALLTLVIGVAGYVLTDKSFQLNGFAAYSWATAYFVIISVEMCWGKHIVGESLGFKSSWGPTLYTNTISIPPMLTIGLVTHE-----------PLKAYEA-TWSLGACALLGLSCLIGVAISYLGFRARALVTATCYTVLGVANKMATVLINVLLWDQHASAAGIFFLTICLIGASTYEQAPM 303          
BLAST of NO08G01620 vs. NCBI_GenBank
Match: XP_002179909.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48895.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 262.3 bits (669), Expect = 2.300e-66
Identity = 143/303 (47.19%), Postives = 190/303 (62.71%), Query Frame = 0
Query:   13 AVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAVGIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVETVIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQFKMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVAPMFCLGYLMGDFQDF--SLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLIGYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLCLVGGSFYQQAPMR 314
            +V +YS+CSGT++L NKL ++++P PS V   QLL A+  I   +    +  D LE   V PYL Y + F +GV+CNM++LS SNVETVI+FR+ +P  V+  D +FLGRE PS +S   L  IA GAYGY   D+QF+  GLAAY+W  LY   I  EM YGK+I   V   ++ GP  YTN L + PM     +  +++ F    M     +GG        + + +L +    GT IGY GW CR  VSAT+FTL+GVINK +TILLNV IWD+HA P GI +L LCLVGGS Y+Q+P+R
Sbjct:   10 SVVAYSLCSGTLVLLNKLTLHHLPYPSLVVSFQLLAALIFIYGAKHTGRLQVDALEWQYVLPYLFYILLFSVGVFCNMKSLSMSNVETVIVFRALSPCIVAFLDVLFLGREYPSLQSWTGLSLIALGAYGYASFDAQFQTQGLAAYAWPGLYLFIISLEMAYGKRIIQSVNLKTLSGPVLYTNLLGLPPMLMFAAMGHEYRSFVYDHMVEQKPVGG--------VAVSLLLLGCAAGTGIGYAGWWCRGNVSATSFTLIGVINKCLTILLNVMIWDQHAPPKGILSLALCLVGGSIYRQSPLR 304          
The following BLAST results are available for this feature:
BLAST of NO08G01620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26587.18.400e-16276.38UAA transporter [Nannochloropsis gaditana][more]
XP_002288871.11.100e-7348.38predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_014160418.11.200e-7245.63hypothetical protein SARC_01346 [Sphaeroforma arct... [more]
GAX21958.12.100e-7247.42hypothetical protein FisN_16Hh051 [Fistulifera sol... [more]
OEU20539.12.000e-7045.81hypothetical protein FRACYDRAFT_274221 [Fragilario... [more]
GAX26224.19.900e-7047.10hypothetical protein FisN_16Lh051 [Fistulifera sol... [more]
KOO27101.16.400e-6944.44drug metabolite transporter superfamily [Chrysochr... [more]
KOO34987.15.400e-6845.08drug metabolite transporter superfamily [Chrysochr... [more]
KOO24007.11.300e-6645.51drug metabolite transporter superfamily [Chrysochr... [more]
XP_002179909.12.300e-6647.19predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008882NSK008882Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01620.1NO08G01620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552878gene_3489Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g64gene3895Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01620.1NO08G01620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01620 ID=NO08G01620|Name=NO08G01620|organism=Nannochloropsis oceanica|type=gene|length=1728bp
AAAAGACAGGTTACACGCGCAACCATTCGACACTCTAAAAAAATGGATTT
CCTGCCACCGCATCTGCGGGTGCCTGCTGCCGTAGCCTCCTACTCGGTAT
GCAGCGGGACCATGCTTCTGTTCAACAAACTGGCCATGTACTACGgtatg
tctcgtgttcgaggaaaatacggggagaaaaaggcggagacggaggacag
agtgacagatagttgggtgataaaagggtatcaagacgcacgaggacgct
tatgagactggggcctgccacactcgagcttcagtacttcgcccaccccg
cgtcggcgcacgatttaccaacctcgtacctcattttcactctctctcct
ttctccacctacacaaacagTGCCCGTCCCGTCTTTCGTGACAGTTGTCC
AACTACTCTTCGCCGTTGGCATCATCCTCCTCCTTCAACGCCTGCACATC
GTCCCCCCCGATCCTCTGGAAAGCAGCAGAGTCAAACCCTACCTTGTCTA
CACTGTCGCCTTCGTCTTGGGCGTGTACTGCAACATGCGCGCCCTTTCTC
ACTCGAACGTTGAGACGGTCATTATCTTTCGGTCCTGTACCCCTTTAGCT
GTCTCGTTGTGTGACTTCATTTTCCTGGGGCGGGAGTTGCCTTCCCGTCG
GTCGTGCTTGGCTCTGTTGACGATTGCGGCGGGTGCCTACGGTTATGTCC
AAACCGATAGCCAGTTTAAGATGGATGGGCTGGCGGCATATTCGTGGGCG
ATTCTATATTTTGTGACCATCTGTTTCGAGATGACGTACGGGAAGAAGAT
CACGAGTGGAGTGAGGTTTAACAGCATGTGGGGCCCTACTTTTTACACGA
ATTTTTTGAGTGTCGCGCCGATGTTTTGCCTGGGTTATCTAATGGGAGAT
TTCCAGGACTTTAGTTTGATGGAGGGAGGGAGTGGGTTAGGGGGTGGGGA
AGCGTGGATGTGGACGAAGATGGGCTTGGTCATGTTGGCGGTTAGTTCTG
TCGTGGGGACGTTGATAGGGTACACGGGGTGGAGTTGTAGGAGCTTGGTG
TCGGCGACCACGTTTACGCTGGTGGGGGTTATTAATAAGTTTATCACAAT
TCTCTTGAATGTGTTCATTTGGGATAAGCATGCGTCGCCGCTGGGGATTT
CGGCGTTGGTGCTTTGTTTGGTGGGGGGGTCGTTCTACCAGCAGGCGCCG
ATGCGGGCGGTTGACAAGCCGTTGGGCGCGGACGAGTTTTTTAAGCTAGG
GTATCAGATGGAGATGGACGAGTATGATAGCAAGGAGGTATTGAAGGGGG
CAGGGTCCATTGAGGCGGTGCCGTTGATTATGTCCACGGAGGGGGGAAGG
AATGGGGGGGAGAAGCAGGTCCCGGTGGGTGCGGTCTAATTTTTTTGGTG
GGGAGGAGGTGGCGAGAATGTTTCTCAGAAGGCCGGCTGTGGCATCCTGG
GCATTCCGATGGTTTCAAAAATGTACGGTAGGTGATTGCCCTGCCGGTGG
TGGTACTAGCATGCGATGCAAAAAATGTAAATGAGAAGCAGGCTTTTCCT
GCGAGCCTAGAAAGCAATTGCGCGAATTTTTAATATATCCGTAGGGCTGT
CAGAAAAAGTTACCTTCATGCTTCACGAACAATCTCATCACATGGATATT
AAAAAAAATAGACCAGATATCTCCAAATAATGTGTCGACAGCAGTCATTT
AAAGACAACAAAAGAAATTGTTTCAGGC
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protein sequence of NO08G01620.1

>NO08G01620.1-protein ID=NO08G01620.1-protein|Name=NO08G01620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bp
MDFLPPHLRVPAAVASYSVCSGTMLLFNKLAMYYVPVPSFVTVVQLLFAV
GIILLLQRLHIVPPDPLESSRVKPYLVYTVAFVLGVYCNMRALSHSNVET
VIIFRSCTPLAVSLCDFIFLGRELPSRRSCLALLTIAAGAYGYVQTDSQF
KMDGLAAYSWAILYFVTICFEMTYGKKITSGVRFNSMWGPTFYTNFLSVA
PMFCLGYLMGDFQDFSLMEGGSGLGGGEAWMWTKMGLVMLAVSSVVGTLI
GYTGWSCRSLVSATTFTLVGVINKFITILLNVFIWDKHASPLGISALVLC
LVGGSFYQQAPMRAVDKPLGADEFFKLGYQMEMDEYDSKEVLKGAGSIEA
VPLIMSTEGGRNGGEKQVPVGAV*
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Synonyms
Publications