NO08G01560, NO08G01560 (gene) Nannochloropsis oceanica

Overview
NameNO08G01560
Unique NameNO08G01560
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4292
Alignment locationchr8:485481..489772 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlyceraldehyde-3-phosphate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:485481..489772 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR020829GlycerAld_3-P_DH_cat
IPR020828GlycerAld_3-P_DH_NAD(P)-bd
IPR020831GlycerAld/Erythrose_P_DH
Homology
BLAST of NO08G01560 vs. NCBI_GenBank
Match: EWM26684.1 (glyceraldehyde-3-phosphate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 559.7 bits (1441), Expect = 6.700e-156
Identity = 271/289 (93.77%), Postives = 283/289 (97.92%), Query Frame = 0
Query:   73 MFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGEKIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAKH 362
            MFKYDTVHGRYKG VSHDEHNLIIDGK+V+C+Q+M+AG IKWD+VGADYIVDATGINLTKGTAEAHFK+GAKKVVMSAPSKDDTPMFVCGVNL+AYKGEKIVSNASCTTNCLAPLAKVINDTFGL+EGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPS TGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKA LKAASEGP+ GILGYTED+VVSTDFYGD HSSIFDAKAGIAL+PNFVKLVSWYDNEAGYSNRVLDLIKHIAKH
Sbjct:    1 MFKYDTVHGRYKGSVSHDEHNLIIDGKEVKCYQEMEAGKIKWDAVGADYIVDATGINLTKGTAEAHFKNGAKKVVMSAPSKDDTPMFVCGVNLEAYKGEKIVSNASCTTNCLAPLAKVINDTFGLEEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAALKAASEGPMRGILGYTEDDVVSTDFYGDAHSSIFDAKAGIALTPNFVKLVSWYDNEAGYSNRVLDLIKHIAKH 289          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: XP_009040278.1 (hypothetical protein AURANDRAFT_70352 [Aureococcus anophagefferens] >EGB04923.1 hypothetical protein AURANDRAFT_70352 [Aureococcus anophagefferens])

HSP 1 Score: 479.9 bits (1234), Expect = 6.700e-132
Identity = 233/343 (67.93%), Postives = 284/343 (82.80%), Query Frame = 0
Query:   31 LRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDP-----------FIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGE-KIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAKH 362
            ++VGINGFGRIGRLV+RAA  +P I++V VNDP           FI T+Y+ YMFKYDTVHG++KG V   E  +I+DG+K++ F +    +IKW S GADY+V++TG+  +   A  H + GAKKVV+SAPS  D PMFVCGVNLD Y+    +VSNASCTTNCLAPLAKVINDT+G++EGLMTTVH+VTATQ+TVDGPS+KDWRGGRGA +NIIPSGTGAAKAVGKVIP L+GKLTGM+FRVPTA+VSVVDLTC+L+ GASYD+IKA +KAA+EGP+ GIL YTED+VVS+DF GD H+SIFDAKAGIAL+ NFVKLVSWYDNE GYSN+VL+LI+H+ +H
Sbjct:    3 IKVGINGFGRIGRLVMRAAAENPRIQIVGVNDPRDAVGGFACRRFIPTDYMRYMFKYDTVHGQFKGTVEAAEDAIIVDGEKIQVFGERDPANIKWSSCGADYVVESTGVFTSTAAAGVHIQGGAKKVVISAPS-GDAPMFVCGVNLDKYESSMNVVSNASCTTNCLAPLAKVINDTYGIEEGLMTTVHSVTATQQTVDGPSQKDWRGGRGACYNIIPSGTGAAKAVGKVIPTLDGKLTGMSFRVPTANVSVVDLTCKLQAGASYDDIKASVKAAAEGPMKGILAYTEDDVVSSDFIGDAHTSIFDAKAGIALTDNFVKLVSWYDNECGYSNKVLNLIEHMEEH 344          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: CBJ30340.1 (triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 479.2 bits (1232), Expect = 1.100e-131
Identity = 236/332 (71.08%), Postives = 274/332 (82.53%), Query Frame = 0
Query:   30 PLRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGE-KIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAK 361
            P+ VGINGFGRIGRLVLRA+  +P + VV++NDPFIDT Y+EYMFKYDTVHG Y G V+HD  +LI+DG K++ F +M   +IKW   GADY+V++TG      TA  H   GAKKVV+SAPS  D PMFV GVN + Y  +  +VSNASCTTNCLAP+AKVINDTFGL EGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPS TGAAKAVGKVIP LNGKLTGM+FRVPTADVSVVDLTCRL K ASYD+IK  ++ ASEG +AG+LGYTE++VVS+DF  + +SS+FDA AGIALS +FVK+VSWYDNE GYS RV+DLI H+AK
Sbjct:  254 PVSVGINGFGRIGRLVLRASLKNPMVNVVSINDPFIDTTYMEYMFKYDTVHGVYDGEVTHDGEHLIVDGTKIKVFGEMDPANIKWGDAGADYVVESTGAFTGIDTAGKHMSGGAKKVVISAPS-GDAPMFVMGVNHEKYTPDMTVVSNASCTTNCLAPVAKVINDTFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRVPTADVSVVDLTCRLDKAASYDDIKGAIREASEGSMAGVLGYTEEQVVSSDFLSNPYSSVFDAGAGIALSDDFVKVVSWYDNEMGYSTRVVDLIAHMAK 584          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: XP_003323419.2 (glyceraldehyde-3-phosphate dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] >EFP79000.2 glyceraldehyde-3-phosphate dehydrogenase [Puccinia graminis f. sp. tritici CRL 75-36-700-3])

HSP 1 Score: 478.4 bits (1230), Expect = 2.000e-131
Identity = 235/332 (70.78%), Postives = 275/332 (82.83%), Query Frame = 0
Query:   30 PLRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAY-KGEKIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAK 361
            P+++G+NGFGRIGRLV+R A  H ++EVVA+NDPFID  Y+ YMFKYD+ HGR+KG VS     L+IDGK +  + +     I W   GADY+V++TG+  TK  A AH K GAKKV++SAPS  D PM+V GVNLD+Y   E +VSNASCTTNCLAPLAKVI+D +G+ EGLMTTVHA TATQKTVDGPS KDWRGGRGA  NIIPS TGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLT R++KGASYDEIKA +KAASEGPL GILGYT++++VSTDF GD+HSSIFDAKAGI+L+PNFVKLVSWYDNE GYS RV+DL+  +AK
Sbjct:    2 PVKLGVNGFGRIGRLVVRNAMLHGDVEVVAINDPFIDLEYMVYMFKYDSTHGRFKGNVSTSNGKLVIDGKSIDVYSERDPSAIAWGKSGADYVVESTGVFTTKQAASAHLKGGAKKVIISAPSA-DAPMYVVGVNLDSYDPKETVVSNASCTTNCLAPLAKVIHDKYGIVEGLMTTVHATTATQKTVDGPSGKDWRGGRGASANIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTVRIEKGASYDEIKATIKAASEGPLKGILGYTDEDLVSTDFVGDSHSSIFDAKAGISLNPNFVKLVSWYDNEWGYSRRVVDLVCEMAK 332          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: AAG11394.1 (glyceraldehyde-3-phosphate dehydrogenase [Ascophyllum nodosum])

HSP 1 Score: 478.4 bits (1230), Expect = 2.000e-131
Identity = 238/331 (71.90%), Postives = 277/331 (83.69%), Query Frame = 0
Query:   31 LRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGE-KIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAK 361
            + V INGFGRIGRLVLRAA+++  I VVAVNDPF+  +Y+ YMFKYDTVHG Y G V +D+ ++I+DGKK++ F +M A ++K+  VGADY+V++TG+  T  +A  H K GAKKVV+SAPS+ D PMFV GVN D Y  +  +VSNASCTTNCLAP+AKVIND+FGL EGLMTTVHAVTATQKTVDGPSKKDWRGGR AGFNIIPS TGAAKAVGKVIP LNGKLTGM+FR+PTA+VSVVDLTCRL+K ASY+EIKA +KAASEGP+ GILGYTED VVS+DF GD+ SSI DA AGIALS  FVKLVSWYDNE GYS RVLDLI H+ K
Sbjct:    2 VNVAINGFGRIGRLVLRAAKHNKHINVVAVNDPFVPPDYMNYMFKYDTVHGVYDGTVENDDSSIIVDGKKIKVFGEMDAANVKFGDVGADYVVESTGLFTTTESAAVHLKGGAKKVVISAPSQ-DAPMFVMGVNQDKYTPDMDVVSNASCTTNCLAPIAKVINDSFGLKEGLMTTVHAVTATQKTVDGPSKKDWRGGRAAGFNIIPSSTGAAKAVGKVIPELNGKLTGMSFRIPTANVSVVDLTCRLEKPASYEEIKAAMKAASEGPMHGILGYTEDSVVSSDFIGDSRSSILDANAGIALSDTFVKLVSWYDNEWGYSCRVLDLITHMDK 331          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: KFH68437.1 (glyceraldehyde-3-phosphate dehydrogenase [Mortierella verticillata NRRL 6337])

HSP 1 Score: 477.6 bits (1228), Expect = 3.300e-131
Identity = 235/330 (71.21%), Postives = 275/330 (83.33%), Query Frame = 0
Query:   31 LRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGE-KIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIA 360
            ++VGINGFGRIGRLVLRAA  +  ++VVA+NDPFID  Y+ YMFKYD+ HGRYKG V   +  L +DG K+  +  +K  +I+W + GADY+V++TG+  T   A  H + GAKKVV+SAPS  D PMFVCGVNLDAYK E K+VSNASCTTNCLAPLAK+I+D FG+ E LMTTVHA TATQKTVDGPS KDWRGGRGAG NIIPS TGAAKAVGKVIP+LNGKLTGMAFRVPT DVSVVDLT RL+K A+Y++IKAV+KAA+EGP+ G++GYTEDEVVSTDF GDTHSSIFDAKAGIALS  FVKLVSWYDNE GYS RV++LI+ +A
Sbjct:    3 VKVGINGFGRIGRLVLRAALANKNVQVVAINDPFIDLAYMVYMFKYDSTHGRYKGHVEAKDGALFVDGNKITVYNSLKPEEIQWGAAGADYVVESTGVFTTIEKASLHLQGGAKKVVISAPSA-DAPMFVCGVNLDAYKPEMKVVSNASCTTNCLAPLAKIIHDNFGITEALMTTVHATTATQKTVDGPSGKDWRGGRGAGANIIPSSTGAAKAVGKVIPSLNGKLTGMAFRVPTPDVSVVDLTARLEKPATYEQIKAVIKAAAEGPMKGVMGYTEDEVVSTDFIGDTHSSIFDAKAGIALSDTFVKLVSWYDNEVGYSTRVVELIEFMA 331          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: WP_048692332.1 (type I glyceraldehyde-3-phosphate dehydrogenase [Catenovulum maritimum] >KMT65177.1 glyceraldehyde-3-phosphate dehydrogenase [Catenovulum maritimum])

HSP 1 Score: 476.9 bits (1226), Expect = 5.700e-131
Identity = 233/331 (70.39%), Postives = 276/331 (83.38%), Query Frame = 0
Query:   31 LRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGEKIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAKH 362
            ++VGINGFGRIGR V RA+    +IEVV +ND  ID +Y+ YM KYD+ HGR+KG V   + NL+++GK VR   +    D+KWD++GA+ +V++TG+ LT  TA  H   GAKKVVMSAPSKDDTPMFVCGVNLD+Y+G++IVSNASCTTNCLAPLAKV+ND +G+ +GLMTTVHA TATQKTVDGPS KDWRGGRGAG NIIPS TGAAKAVGKVIP LNGKLTGMAFRVPT DVSVVDLT  L+K A+Y+EI A +KAA+EGPL GILGYTEDEVVS DF G+T +SIFDAKAGIAL+ NFVK+VSWYDNE GYSN+VLDL+ +IAK+
Sbjct:    3 IKVGINGFGRIGRFVFRASVERDDIEVVGIND-LIDVDYMAYMLKYDSTHGRFKGDVEVKDGNLVVNGKVVRVTAERNPEDLKWDAIGAEIVVESTGLFLTDETARKHITAGAKKVVMSAPSKDDTPMFVCGVNLDSYEGQEIVSNASCTTNCLAPLAKVLNDKWGIKDGLMTTVHATTATQKTVDGPSVKDWRGGRGAGQNIIPSSTGAAKAVGKVIPQLNGKLTGMAFRVPTPDVSVVDLTVNLEKSATYEEICAEMKAAAEGPLKGILGYTEDEVVSNDFVGETCTSIFDAKAGIALTDNFVKVVSWYDNEIGYSNKVLDLVSYIAKN 332          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: OGK07802.1 (type I glyceraldehyde-3-phosphate dehydrogenase, partial [Candidatus Riflebacteria bacterium GWC2_50_8])

HSP 1 Score: 476.5 bits (1225), Expect = 7.400e-131
Identity = 233/328 (71.04%), Postives = 274/328 (83.54%), Query Frame = 0
Query:   32 RVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGEKIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIA 360
            ++GINGFGRIGRLV RAA N+PEIEVV +ND  ID NY+ YM KYD+ HGR+ G V  ++  L+++GKK+R   +    ++KW+ VGA+++V++TG+ LTK TA  H   GAKKV+MSAPSKDDT MFV GVN ++YKGE+IVSNASCTTNCLAP+AKV+ND FG+ EGLMTTVHA TATQKTVDGPS KDWRGGR A  NIIPS TGAAKAVGKVIPALNGKLTGMAFRVPT +VSVVDLTCRL+K ASYD IK V+KAASEG + GILGYTED VVSTDF GD+HSSIFDA AGI+L+ NFVK+VSWYDNE GYS RVLDL+ ++A
Sbjct:    4 KIGINGFGRIGRLVFRAAMNNPEIEVVGIND-LIDANYMAYMLKYDSTHGRFTGDVKVEDGKLVVNGKKIRVTSEKDPANLKWNEVGAEFVVESTGLFLTKETASKHIAAGAKKVIMSAPSKDDTKMFVMGVNHESYKGEEIVSNASCTTNCLAPIAKVLNDNFGIVEGLMTTVHATTATQKTVDGPSAKDWRGGRTASTNIIPSSTGAAKAVGKVIPALNGKLTGMAFRVPTTNVSVVDLTCRLEKPASYDTIKKVMKAASEGAMKGILGYTEDAVVSTDFLGDSHSSIFDADAGISLNDNFVKVVSWYDNEWGYSCRVLDLLLYMA 330          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: WP_036936905.1 (type I glyceraldehyde-3-phosphate dehydrogenase [Pseudobacteroides cellulosolvens] >KNY28481.1 glyceraldehyde-3-phosphate dehydrogenase, type I [Pseudobacteroides cellulosolvens ATCC 35603 = DSM 2933])

HSP 1 Score: 476.1 bits (1224), Expect = 9.700e-131
Identity = 236/331 (71.30%), Postives = 273/331 (82.48%), Query Frame = 0
Query:   31 LRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAY-KGEKIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAK 361
            +++GINGFGRIGRLV RAA  +P +EV  +NDPFID  Y++YM +YDTVHG+++G +S ++  L+++GKK+  F      +I W S GADY+V++TG+  T   A AHFK GAKKVV+SAPS  D PMFV GVN D Y K  K+VSNASCTTNCLAPLAKVIND FG+ EGLMTTVHAVTATQKTVDGPS KDWRGGRGAGFNIIPS TGAAKAVGKVIP LNGKLTGMAFRVPTADVSVVDLT RL+K ASYD+IKA +K ASE  L GILGYTEDEVVS+DF  D+ +SIFDAKAGIAL+ NFVKLVSWYDNE GYSN+V+DLI H+AK
Sbjct:    3 VKIGINGFGRIGRLVFRAAIANPNVEVTGINDPFIDLEYMKYMLRYDTVHGKFEGEISSEDGKLVVNGKKIAVFASKDPAEIAWSSCGADYVVESTGVFTTTEKASAHFKGGAKKVVISAPSA-DAPMFVMGVNNDKYTKDMKVVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHAVTATQKTVDGPSMKDWRGGRGAGFNIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTADVSVVDLTVRLEKAASYDDIKAAVKKASENELKGILGYTEDEVVSSDFIHDSRTSIFDAKAGIALNGNFVKLVSWYDNEWGYSNKVVDLIVHMAK 332          
BLAST of NO08G01560 vs. NCBI_GenBank
Match: XP_023470471.1 (glyceraldehyde-3-phosphate dehydrogenase 1 [Rhizopus microsporus ATCC 52813] >ORE06755.1 glyceraldehyde-3-phosphate dehydrogenase 3 [Rhizopus microsporus var. microsporus] >PHZ16763.1 glyceraldehyde-3-phosphate dehydrogenase 1 [Rhizopus microsporus ATCC 52813])

HSP 1 Score: 475.3 bits (1222), Expect = 1.700e-130
Identity = 233/333 (69.97%), Postives = 270/333 (81.08%), Query Frame = 0
Query:   30 PLRVGINGFGRIGRLVLRAAQNHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKKVRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSAPSKDDTPMFVCGVNLDAYKGE-KIVSNASCTTNCLAPLAKVINDTFGLDEGLMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPALNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAAS-EGPLAGILGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNRVLDLIKHIAK 361
            P+  GINGFGRIGR+VLRA+ ++P + VVA+NDPFID +Y+ YMFKYD+ HGR+KG V   +  L+++G+ +    +     I W   GADY++++TG+  TK  A AH K GAKKV++SAPS  D PMFVCGVNLD Y  +  ++SNASCTTNCLAPLAKVI+D +G+ EGLMTTVHA TATQKTVDGPS KDWRGGRGAG NIIPS TGAAKAVGKVIP LNGKLTGMAFRVPT DVSVVDLT RL+K ASYDEIKAV+K AS EGPL GILGYTED+VVSTDF  DTHSS+FDAKAGI LSP FVKL+SWYDNE GYS RV+DLI HIAK
Sbjct:    2 PINAGINGFGRIGRIVLRASLDNPNVNVVAINDPFIDLDYMVYMFKYDSTHGRFKGTVEKKDGKLVVNGQAITVHTERDPSQIPWAQDGADYVIESTGVFTTKEAASAHLKGGAKKVIISAPSA-DAPMFVCGVNLDKYSSDMTVISNASCTTNCLAPLAKVIHDNYGIIEGLMTTVHATTATQKTVDGPSNKDWRGGRGAGANIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASYDEIKAVIKKASEEGPLKGILGYTEDQVVSTDFLSDTHSSVFDAKAGIQLSPTFVKLISWYDNEYGYSTRVVDLIAHIAK 333          
The following BLAST results are available for this feature:
BLAST of NO08G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26684.16.700e-15693.77glyceraldehyde-3-phosphate dehydrogenase [Nannochl... [more]
XP_009040278.16.700e-13267.93hypothetical protein AURANDRAFT_70352 [Aureococcus... [more]
CBJ30340.11.100e-13171.08triosephosphate isomerase/glyceraldehyde-3-phospha... [more]
XP_003323419.22.000e-13170.78glyceraldehyde-3-phosphate dehydrogenase [Puccinia... [more]
AAG11394.12.000e-13171.90glyceraldehyde-3-phosphate dehydrogenase [Ascophyl... [more]
KFH68437.13.300e-13171.21glyceraldehyde-3-phosphate dehydrogenase [Mortiere... [more]
WP_048692332.15.700e-13170.39type I glyceraldehyde-3-phosphate dehydrogenase [C... [more]
OGK07802.17.400e-13171.04type I glyceraldehyde-3-phosphate dehydrogenase, p... [more]
WP_036936905.19.700e-13171.30type I glyceraldehyde-3-phosphate dehydrogenase [P... [more]
XP_023470471.11.700e-13069.97glyceraldehyde-3-phosphate dehydrogenase 1 [Rhizop... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008892NSK008892Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01560.1NO08G01560.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669449gene_3483Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g58gene3901Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01560.1NO08G01560.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01560 ID=NO08G01560|Name=NO08G01560|organism=Nannochloropsis oceanica|type=gene|length=4292bp
GGTCCCTGAATCAGCATTCTTCTTTATTGATTGAAAAGACATATACACAT
GCTGTTTGTAAATGGATTTCCCGCTGTCTGTCCAAACGTCCCCTTGGGGG
CCGACCGTCTCATCTCCCTCCTTCCTTCCTACTTTTAAAACAAGCTTGAC
TTCTTCATGATCCGCATAAATTCCTCCTCGTTGATGAGCCCGTCGCCGTC
CCGGTCCGCCTCATCTGGTAAGAGAAAAGGGAAAGGAAAAACAGGAGGGG
AAGAAAAAGGTAAGAAAATGTATGAAGTAAAATGAAGATAGAAATGTCAT
TCCTCTCCTCTCTCATTCATCACAAAGCCATGCTTAATTTCATTCGTCGA
AAAGGAAAATTCATGTATGTTCCTCGAACCCTACCTAGCGCTTTTACAAA
AAATCCGTTCATACCCCAACTTTCTCCCATCCTTCCCTTCAAACGTACCA
ATCATCTCCTGCAACTCCTCGTCCGTCATTGACTCGCCCAATTCCCGGGC
CACTCGCTTCAAATCCTGAAAACTTATCACGCCCTTCTCGCCCGCATCAA
ATAATCGAAAGGCCTTGGCCATCTCCTCTCGACCGTCCTTCTCTCCCAGT
TTGACTGCCATAATTTCCACAAAATGTTTGTATGAGATGCTGCCACTTTC
GTCTCCGTCCACTGCCGATGCCACCAACCGGGCGACCTCCTCCTTTCTGG
GCTCAAAACCTAAGGCGCGCATGGCTATGCGCAATTCCTTGCTGTCAATA
TGCCCCGTGCCCTCTGTGTCAAATAAGTCAAAAGCCTCCTTAATTTCTTG
TCGCTGCTCTTCACTCAGGGCTTGAATGGCTTTGCCTTTGCTGGAGGTAG
CTTTGCTCGACGCCATTTCAAGATGTCGAGAAGCTTCTTGTGTGAAAGTA
AGACTGGGCTGGTATAGAGCGTGACTGTTGCTGTTGCTTGTTCTGCGGTA
TGCCTGCGAAGGGGTGGGGAGGGTGATGATGAGCATGACGGGATGACGCA
GAGGTCATGAGTTTTTTTTTCTGCCTTTGACTCCTGCATGCGGTGGTTTA
TGTATTGCATGCTATTCCTACCTTGCCACGAGTGCAGTCTGGAAGGGGAT
ATGGGAAAAAAAGAGGGTGCGAAGGACGAAACATTTGTCAAGTGGTGTGT
TCTCGTTGAGAAACGCAGACTCTTTCGGAAAAGAAGAGAAGAAAAGAGCG
ATCGTGCATGCACGAGCAGTCTAGGCTCCTGGAAGTGAAAGTGGCATTTG
GCTATTGTGTAAATGCATACGTGTTTGTTGTCTCTACCTGAGGAGACTTG
CCTTTATCTCATTCGTGCTTGTCCAGGCTGTATGTCTTCGGGCACATTTG
CTTGCGTCGTTGGCGCACCCCACCGTTGCTCTACGCAAAAACATACCCAC
TGGACGATACTTAAACATACCCACTGGACGACACAGTCAATCACTACTGC
CCTGAGCCATGTTCCGCGCGACTTCTGCCACTGCCCGCACCCTCGCGACT
AACTCAAAAAAGgtaagtaaggcgaaaggctgttgagattcccttgcgag
gatctgatggatggatcgggcgagtgggcgcggtcaaagacgcttctact
gtcgcggtttctgggcataaacatgtgccaataaccaacttgcgcatata
cgggtgaaaaattaagtcaaaattcgggtgcatagagtgtatatgcgtgc
ggtcaggtgtccatcgacgacctttttcctcatcttccacccactctatc
ctgtgcgtgtatctcacgcaaaagcagaccccacctacacacttatgatc
ctctatcgtcgcattttccatagGCCACCTTTACCACCTCCACCATCCGT
AATGCCCCGCTTCGCGTGGGGATCAATGGCTTCGGCCGCATCGGGCGCCT
TGTGCTTCGCGCTGCCCAGAACCACCCGGAGATCGAGgtaggtaaccctg
aaggactgcacctcttcttcctctttttcctttctgtatgtctggtcgct
catttaacttaaccctgttatttctatcaattcttattcgatcctttccc
tttcttctccgtttttcctacgttccctcccctgcgaccacagGTCGTGG
CCGTCAACGACCCGTTCATTGACACCAATTACATCGAGTACATGTTCAAG
TATGACACTGTCCATGGTCGCTACAAGGGCGTCGTCTCCCACGACGAACA
TAATCTCATCATTGgtaaggcccgaggaggaagagagaagacgatgtaac
gtgaagcaccccgaaaaagaaaagaaaaaagtaagagatgcccacaggca
tgttacagtgacccggtgcatactttctaattcagctgttattcgccccc
atacccgcttgatttcatcgtagACGGGAAGAAGGTGCGATGTTTCCAGG
ACATGAAGGCTGGGGATATCAAGTGGGACTCCGTCGGCGCCGACTATATC
GTGGATGCCACTGgtaagtacagaggggagggggagagagggggggattg
aggcgtagagtgcgtaccttaaacaatggggaaataaagaaaaagggcct
tcaaatgggcacgtggcgtctactcacgaatcttctttcacaccctgccc
gatctcactttcccctccagGCATCAACCTGACCAAGGGCACGGCCGAGG
CGCACTTTAAGCACGGGGCCAAGAAGGTGGTCATGTCCGCCCCTTCCAAG
GACGACACCCCCATGTTTGTCTGCGGTGTGAACCTGGACGCATACAAGGG
CGAGAAGATCGTCTCCAATGCCTCCTGgtacggaggaagggctacggagg
gagggagggaggaagggagggagggatggaatgaccgagggaaaagaaga
ctgttgatgagttgctatgacaattgtgtggagtgaaggactgccgaaaa
atatcaattcatgcctctcatatttccccctcattccctcccccctccca
gTACCACTAACTGCCTGGCCCCTCTGGCCAAGGTTATCAACGATACCTTC
GGCCTCGACGAAGGCCTCATGACGACCGTGCACGCCGTGACTGCCACCCA
AAAGACTGTGGATGGCCCGTCCAAGAAGGACTGGCGTGGAGGCCGAGGCG
CGGGCTTTAACATCATTCCCTCGGGCACGGGGGCGGCCAAGGCGGTGGGA
AAAGTGATCCCGGCGCTAAACGGGAAGTTGACGGGCATGGCCTTCCGTGT
CCCGACAGCTGACGTGTCCGTGGTGGACCTGACGTGCCGCTTGAAGAAGG
GTGCGAGCTACGATGAAATCAAGGCGGTGCTTAAGGCAGCCAGCGgtgag
aagggaagaaggcagggggggagggaaggaacgagcttggttgtggaatg
gcatgtactgggtgaaaacattttatttttattttttatttaaaaaaagg
gggggtggaagtggtagggggaatatttgggttttatgtcattttcgcgg
tatatcttcatttctgcaaccctccctcctcctcaaaacccttccctcct
cctcaccatctctccatccccatcgcacacccagAGGGGCCCCTGGCCGG
TATCTTGGGGTACACGGAAGATGAAGTGGTCTCGACTGATTTCTACGGCG
ACACCCACTCTTCCATCTTTGACGCCAAGGCCGGGATTGCCCTGAGCCCG
AACTTCGTCAAGCTTGTGTCTTGGgtacgtggcgtgttttcctacttgat
gtttctcggtctgggtctccagcttgatgtttctcagtttggatgggacg
attactttctgtacttcgagccttttttacccaacttgcgatctttcact
acctgcctctccatctctccatgactaacttccctccctcccttccttcc
tcctccccatcccatgttcacctacctacgcaacagTACGACAACGAGGC
TGGCTACTCCAACCGTGTGCTCGACCTGATCAAGCACATCGCCAAGCATT
AAAGTGTCTCACCGTTCTCTTTCCGGAAGAGGGAGGGAGGGCAAGACAAG
GAGGAATGACAAGGAAAGCGGCGGGGGCGGGCGAGTTGGGGGGGAGACTA
CAGCACCGAGAAAGGATTTGGGTGTAGTTTTGGGCGGATTTTTTGCCCCA
TTTTTGGCTTAATGTCGGAGAGAAGTTAGCGAGGAGAGGAAGATGAGGTG
GAAGAGAGAAGAACGGAAGGATGGAAGGAGGGAAGTAGATAGTGAGAGAG
GGAGGGAGGAGGGGAGGGCTAAGCTCTCGGTTCAATCCTGATTGAAGATG
AAAAATATGTATGACATGCTTTCATTCATTAATTCGTTCAAC
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protein sequence of NO08G01560.1

>NO08G01560.1-protein ID=NO08G01560.1-protein|Name=NO08G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=362bp
MFRATSATARTLATNSKKATFTTSTIRNAPLRVGINGFGRIGRLVLRAAQ
NHPEIEVVAVNDPFIDTNYIEYMFKYDTVHGRYKGVVSHDEHNLIIDGKK
VRCFQDMKAGDIKWDSVGADYIVDATGINLTKGTAEAHFKHGAKKVVMSA
PSKDDTPMFVCGVNLDAYKGEKIVSNASCTTNCLAPLAKVINDTFGLDEG
LMTTVHAVTATQKTVDGPSKKDWRGGRGAGFNIIPSGTGAAKAVGKVIPA
LNGKLTGMAFRVPTADVSVVDLTCRLKKGASYDEIKAVLKAASEGPLAGI
LGYTEDEVVSTDFYGDTHSSIFDAKAGIALSPNFVKLVSWYDNEAGYSNR
VLDLIKHIAKH*
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Synonyms
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