NO08G01550, NO08G01550 (gene) Nannochloropsis oceanica

Overview
NameNO08G01550
Unique NameNO08G01550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1456
Alignment locationchr8:485481..486936 -

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Properties
Property NameValue
DescriptionCentrin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:485481..486936 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom
Homology
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: XP_678730.1 (centrin, putative [Plasmodium berghei ANKA] >XP_008626376.1 caltractin [Plasmodium vinckei vinckei] >XP_016653075.1 centrin, putative [Plasmodium chabaudi chabaudi] >EUD70216.1 caltractin [Plasmodium vinckei petteri] >KEG00685.1 caltractin [Plasmodium vinckei vinckei] >CDR10687.1 centrin, putative [Plasmodium chabaudi chabaudi] >CDS44449.1 centrin, putative [Plasmodium berghei ANKA] >CXH87240.1 centrin-1, putative [Plasmodium berghei] >SCL96544.1 centrin-1, putative [Plasmodium chabaudi chabaudi] >SCL99310.1 centrin-1, putative [Plasmodium chabaudi adami] >SCL96337.1 centrin-1, putative [Plasmodium chabaudi chabaudi] >SCM03734.1 centrin-1, putative [Plasmodium chabaudi adami])

HSP 1 Score: 202.2 bits (513), Expect = 1.500e-48
Identity = 100/149 (67.11%), Postives = 129/149 (86.58%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            L++EQ+ EIKEAFDLFDT GTG ID+KEL++AMRALGFEP+KE++ +++ S VD D SG+I +  F++IM +K+ E+D +EE+ KAFRLFD  E G ISF++LKRVA+ELGE++TDEE+QEMIDEADRDGDG INEEEFMRIMKK++LF
Sbjct:   21 LNDEQKLEIKEAFDLFDTNGTGRIDAKELKVAMRALGFEPKKEDIRKII-SDVDKDGSGTIDFNDFLDIMTIKMSERDPKEEILKAFRLFDDDETGKISFKNLKRVAKELGENITDEEIQEMIDEADRDGDGEINEEEFMRIMKKTNLF 168
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: SOV10224.1 (centrin-1 [Plasmodium sp. gorilla clade G2])

HSP 1 Score: 202.2 bits (513), Expect = 1.500e-48
Identity = 101/149 (67.79%), Postives = 129/149 (86.58%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            L+EEQ+ EIKEAFDLFDT GTG ID+KEL++AMRALGFEP+KE++ +++ S VD D SG+I +  F++IM +K+ E+D +EE+ KAFRLFD  E G ISF++LKRVA+ELGE++TDEE+QEMIDEADRDGDG INEEEFMRIMKK++LF
Sbjct:   21 LNEEQKLEIKEAFDLFDTNGTGRIDAKELKVAMRALGFEPKKEDIRKII-SDVDKDGSGTIDFNDFLDIMTIKMCERDPKEEILKAFRLFDDDETGKISFKNLKRVAKELGENITDEEIQEMIDEADRDGDGEINEEEFMRIMKKTNLF 168
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: XP_023952851.1 (caltractin [Bicyclus anynana])

HSP 1 Score: 201.4 bits (511), Expect = 2.600e-48
Identity = 100/149 (67.11%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            LSEEQR++IKEAFDLFDTE TG IDSKEL++A+RALGFEP+KEE+ +++A    GD  G +S++ F+++M VK+ EKD +EE+ KAF+LFD  E G ISF++LKRVARELGE++TDEEL EMIDEADRDGDG IN+EEF+RIMKK+SL+
Sbjct:   33 LSEEQRRDIKEAFDLFDTENTGKIDSKELKVAIRALGFEPKKEEIKKMIAEIDKGD--GKVSFEDFLDLMTVKMAEKDTKEEIMKAFKLFDDDETGKISFKNLKRVARELGENLTDEELHEMIDEADRDGDGEINQEEFLRIMKKTSLY 179
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: XP_004030242.1 (hypothetical protein IMG5_165510 [Ichthyophthirius multifiliis] >EGR29006.1 hypothetical protein IMG5_165510 [Ichthyophthirius multifiliis])

HSP 1 Score: 199.9 bits (507), Expect = 7.700e-48
Identity = 100/154 (64.94%), Postives = 132/154 (85.71%), Query Frame = 0 
Query:   52 KAIQALSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            KA   L+EEQ+QEIKEAFDLFDT+GTG+ID+KEL++AMRALGFEP+K+E+ +++A  VD +  G I ++ F+++M VK+ ++D REE+ KAFRLFD  + G IS ++LKRVARELGE+MT+EELQEMIDEADRDGDG I+EEEF+RIMKK++LF
Sbjct:   16 KARSELTEEQKQEIKEAFDLFDTDGTGYIDAKELKVAMRALGFEPKKDEIKKMIAD-VDREGRGVIEFQDFLDLMTVKMADRDPREEILKAFRLFDDDQTGRISLKNLKRVARELGEAMTEEELQEMIDEADRDGDGEISEEEFIRIMKKTNLF 168
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: SPJ08161.1 (centrin-1 [Plasmodium sp. DRC-Itaito])

HSP 1 Score: 199.9 bits (507), Expect = 7.700e-48
Identity = 99/146 (67.81%), Postives = 126/146 (86.30%), Query Frame = 0 
Query:   60 EQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            EQ+ EIKEAFDLFDT GTG ID+KEL++AMRALGFEP+KE++ +++ S VD D SG+I +  F++IM +K+ E+D +EE+ KAFRLFD  E G ISF++LKRVA+ELGE++TDEE+QEMIDEADRDGDG INEEEFMRIMKK++LF
Sbjct:   24 EQKLEIKEAFDLFDTNGTGRIDAKELKVAMRALGFEPKKEDIRKII-SDVDKDGSGTIDFNDFLDIMTIKMSERDPKEEILKAFRLFDDDETGKISFKNLKRVAKELGENITDEEIQEMIDEADRDGDGEINEEEFMRIMKKTNLF 168
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: OWR42482.1 (centrin [Danaus plexippus plexippus])

HSP 1 Score: 199.5 bits (506), Expect = 1.000e-47
Identity = 99/149 (66.44%), Postives = 127/149 (85.23%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            LSEEQR++IKEAFDLFDTE TG ID+KEL++A+RALGFEP+KEE+ +++A    GD  G +S+  F+++M VK+ EKD +EE+ KAF+LFD  E G ISF++LKRVARELGE++TDEEL EMIDEADRDGDG IN+EEF+RIMKK+SL+
Sbjct:   32 LSEEQRRDIKEAFDLFDTENTGKIDTKELKVAIRALGFEPKKEEIKKMIAEIDKGD--GKVSFDDFLDLMTVKMAEKDTKEEIMKAFKLFDDDETGKISFKNLKRVARELGENLTDEELHEMIDEADRDGDGEINQEEFLRIMKKTSLY 178
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: KOB68611.1 (Centrin, partial [Operophtera brumata])

HSP 1 Score: 199.5 bits (506), Expect = 1.000e-47
Identity = 99/149 (66.44%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            LSEEQR++IKEAFDLFDTE TG ID+KEL++A+RALGFEP+KEE+ ++VA    GD  G +S++ F+++M VK+ EKD +EE+ KAF+LFD  E G ISF++LKRVA+ELGE++TDEEL EMIDEADRDGDG IN+EEF+RIMKK+SL+
Sbjct:   28 LSEEQRRDIKEAFDLFDTESTGKIDTKELKVAIRALGFEPKKEEIKKMVAEIDKGD--GKVSFEDFLDLMTVKMAEKDTKEEIMKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELHEMIDEADRDGDGEINQEEFLRIMKKTSLY 174
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: XP_016395271.1 (PREDICTED: caltractin isoform X1 [Sinocyclocheilus rhinocerous] >XP_016395272.1 PREDICTED: caltractin isoform X2 [Sinocyclocheilus rhinocerous])

HSP 1 Score: 199.5 bits (506), Expect = 1.000e-47
Identity = 100/149 (67.11%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            L+EEQRQEIKEAFDLFDT+G+G+ID KEL++AMRALGFEP+KEE+ +++A  +D + SG IS+  F+ +M  K+ EKD +EE+ KAFRLFD    G ISF++LKRVA+ELGE++TDEELQEMIDEADRDGDG INE+EF+RIMKK+SL+
Sbjct:   24 LTEEQRQEIKEAFDLFDTDGSGNIDVKELKVAMRALGFEPKKEEIKKMIAD-IDKEGSGVISFNDFLSMMTQKMSEKDSKEEIMKAFRLFDDDCTGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINEQEFLRIMKKTSLY 171
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: PNF15091.1 (Centrin-1, partial [Cryptotermes secundus])

HSP 1 Score: 199.5 bits (506), Expect = 1.000e-47
Identity = 99/149 (66.44%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            L+EEQ+ +IKEAFDLFDTEG G I++KEL+IAMRALGFEPRKEE+ +++ + +D + SG +SY  F+ +M +K+ EKD +EE+ KAFRLFD  E G ISF++LKRVA+ELGE++TDEELQEMIDEADRDGDG IN+EEF+RIMKK+SL+
Sbjct:   67 LTEEQKADIKEAFDLFDTEGNGKIETKELKIAMRALGFEPRKEEIKKMI-TEIDKEGSGFLSYDEFLGLMTLKMAEKDSKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINQEEFLRIMKKTSLY 214
[Close]
BLAST of NO08G01550 vs. NCBI_GenBank
Match: XP_023725433.1 (caltractin [Cryptotermes secundus] >PNF15093.1 Centrin-1 [Cryptotermes secundus])

HSP 1 Score: 199.5 bits (506), Expect = 1.000e-47
Identity = 99/149 (66.44%), Postives = 128/149 (85.91%), Query Frame = 0 
Query:   57 LSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEEVARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGEKGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMKKSSLF 206
            L+EEQ+ +IKEAFDLFDTEG G I++KEL+IAMRALGFEPRKEE+ +++ + +D + SG +SY  F+ +M +K+ EKD +EE+ KAFRLFD  E G ISF++LKRVA+ELGE++TDEELQEMIDEADRDGDG IN+EEF+RIMKK+SL+
Sbjct:   33 LTEEQKADIKEAFDLFDTEGNGKIETKELKIAMRALGFEPRKEEIKKMI-TEIDKEGSGFLSYDEFLGLMTLKMAEKDSKEEILKAFRLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEINQEEFLRIMKKTSLY 180
The following BLAST results are available for this feature:
BLAST of NO08G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_678730.11.500e-4867.11centrin, putative [Plasmodium berghei ANKA] >XP_00... [more]
SOV10224.11.500e-4867.79centrin-1 [Plasmodium sp. gorilla clade G2][more]
XP_023952851.12.600e-4867.11caltractin [Bicyclus anynana][more]
XP_004030242.17.700e-4864.94hypothetical protein IMG5_165510 [Ichthyophthirius... [more]
SPJ08161.17.700e-4867.81centrin-1 [Plasmodium sp. DRC-Itaito][more]
OWR42482.11.000e-4766.44centrin [Danaus plexippus plexippus][more]
KOB68611.11.000e-4766.44Centrin, partial [Operophtera brumata][more]
XP_016395271.11.000e-4767.11PREDICTED: caltractin isoform X1 [Sinocyclocheilus... [more]
PNF15091.11.000e-4766.44Centrin-1, partial [Cryptotermes secundus][more]
XP_023725433.11.000e-4766.44caltractin [Cryptotermes secundus] >PNF15093.1 Cen... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01550.1NO08G01550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582309gene_3482Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Centringene3902Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01550.1NO08G01550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01550 ID=NO08G01550|Name=NO08G01550|organism=Nannochloropsis oceanica|type=gene|length=1456bp
CTCAGGGCAGTAGTGATTGACTGTGTCGTCCAGTGGGTATGTTTAAGTAT
CGTCCAGTGGGTATGTTTTTGCGTAGAGCAACGGTGGGGTGCGCCAACGA
CGCAAGCAAATGTGCCCGAAGACATACAGCCTGGACAAGCACGAATGAGA
TAAAGGCAAGTCTCCTCAGGTAGAGACAACAAACACGTATGCATTTACAC
AATAGCCAAATGCCACTTTCACTTCCAGGAGCCTAGACTGCTCGTGCATG
CACGATCGCTCTTTTCTTCTCTTCTTTTCCGAAAGAGTCTGCGTTTCTCA
ACGAGAACACACCACTTGACAAATGTTTCGTCCTTCGCACCCTCTTTTTT
TCCCATATCCCCTTCCAGACTGCACTCGTGGCAAGGTAGGAATAGCATGC
AATACATAAACCACCGCATGCAGGAGTCAAAGGCAGAAAAAAAAACTCAT
GACCTCTGCGTCATCCCGTCATGCTCATCATCACCCTCCCCACCCCTTCG
CAGGCATACCGCAGAACAAGCAACAGCAACAGTCACGCTCTATACCAGCC
CAGTCTTACTTTCACACAAGAAGCTTCTCGACATCTTGAAATGGCGTCGA
GCAAAGCTACCTCCAGCAAAGGCAAAGCCATTCAAGCCCTGAGTGAAGAG
CAGCGACAAGAAATTAAGGAGGCTTTTGACTTATTTGACACAGAGGGCAC
GGGGCATATTGACAGCAAGGAATTGCGCATAGCCATGCGCGCCTTAGGTT
TTGAGCCCAGAAAGGAGGAGGTCGCCCGGTTGGTGGCATCGGCAGTGGAC
GGAGACGAAAGTGGCAGCATCTCATACAAACATTTTGTGGAAATTATGGC
AGTCAAACTGGGAGAGAAGGACGGTCGAGAGGAGATGGCCAAGGCCTTTC
GATTATTTGATGCGGGCGAGAAGGGCGTGATAAGTTTTCAGGATTTGAAG
CGAGTGGCCCGGGAATTGGGCGAGTCAATGACGGACGAGGAGTTGCAGGA
GATGATTGgtacgtttgaagggaaggatgggagaaagttggggtatgaac
ggattttttgtaaaagcgctaggtagggttcgaggaacatacatgaattt
tccttttcgacgaatgaaattaagcatggctttgtgatgaatgagagagg
agaggaatgacatttctatcttcattttacttcatacattttcttacctt
tttcttcccctcctgtttttcctttcccttttctcttaccagATGAGGCG
GACCGGGACGGCGACGGGCTCATCAACGAGGAGGAATTTATGCGGATCAT
GAAGAAGTCAAGCTTGTTTTAAAAGTAGGAAGGAAGGAGGGAGATGAGAC
GGTCGGCCCCCAAGGGGACGTTTGGACAGACAGCGGGAAATCCATTTACA
AACAGCATGTGTATATGTCTTTTCAATCAATAAAGAAGAATGCTGATTCA
GGGACC
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protein sequence of NO08G01550.1

>NO08G01550.1-protein ID=NO08G01550.1-protein|Name=NO08G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=206bp
MLIITLPTPSQAYRRTSNSNSHALYQPSLTFTQEASRHLEMASSKATSSK
GKAIQALSEEQRQEIKEAFDLFDTEGTGHIDSKELRIAMRALGFEPRKEE
VARLVASAVDGDESGSISYKHFVEIMAVKLGEKDGREEMAKAFRLFDAGE
KGVISFQDLKRVARELGESMTDEELQEMIDEADRDGDGLINEEEFMRIMK
KSSLF*
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Synonyms
Publications