NO08G01470, NO08G01470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM26706.1 (retinol dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 637.9 bits (1644), Expect = 2.100e-179 Identity = 300/379 (79.16%), Postives = 335/379 (88.39%), Query Frame = 0 Query: 11 IESMAVTVDMSPVSLSPELEKAPEPLLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECP-EGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKLEDGAPFAKMIPAGAVDRD 389 +E M+ TVD+ P E+ EPLLSRLNNFLHSNIYVY+ITYYL+WLGFWL +P+ FFTMLGFGLYDLFTAKGFRKPCGPVLITG SSGFGLDLT+ LAAQGWKVYACVR+ AD+APF+ PNVKGLI+DVTNEEQ+RAA ATV+ E P EGLYALVNNAG+E YGTTDWC LDYFK+HMDVNYYGPIR+TK ALPLLK++G+ G ARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMR FN+++TV+NPSWH TRCALPPK+KLL FRAAPP VQ DYGE YV+EAA+EAY GRQWFTW PENVGRVMLWAVTAE+YRPQY+VG+DARFVNMPFLALPRRIMN LED APF+KM+PA A+ R+ Sbjct: 5 VEIMSTTVDIPSAPSKP--EEKHEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGSAAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDYGEPYVVEAAEEAYTGRQWFTWKPENVGRVMLWAVTAERYRPQYIVGLDARFVNMPFLALPRRIMNNLEDAAPFSKMLPAAAIHRE 381
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM26631.1 (NAD(P)-binding domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 263.1 bits (671), Expect = 1.400e-66 Identity = 135/272 (49.63%), Postives = 178/272 (65.44%), Query Frame = 0 Query: 34 EPLLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECP-EGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGK-EGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADY 304 E LLS+LN+FL ++ YV YY FW FWL MP ++ LYD T KG RKP GPVLITG SGFG L L L+ GW VYA + FA+ V LIMDVT EE +RA +A V+A P EGLYALVNNAG +++GTTDWC +++++ HM++N++G +R+ K ALPLLK+ + +RI+NI S SGLLPGL +K Y ASKHAAE+WSNSLR E+R F +++ +NP WH T A +D L+ + + ++QADY Sbjct: 50 ETLLSQLNSFLSAD-YVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM26619.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 247.3 bits (630), Expect = 7.900e-62 Identity = 135/346 (39.02%), Postives = 198/346 (57.23%), Query Frame = 0 Query: 34 EPLLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGPVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYP-----NVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAG---YEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGK-AGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKL 371 + ++S+LN+F+H + Y+ I +Y FWLGFW+ MP L +YDL TA+G+R+PCGPVL+TG +GFG L L LA + WKV A + + R P N+ + +D++N+++I+A + A+ PEGLYALVNN + G +W +D +K+HM+VN Y IR TK LPLLKK+ + A + RI+ +NS +G++PG P Y+ +KHA +AW +SL E + +E + P WH D F P VQ +YG +Y + + + R W ENV ++ AVTAEK RP +VG+D RF+ P L LPRR+ N + Sbjct: 26 QSIISKLNDFVHRD-YITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSY-REPANGSMNIDPIKLDLSNDDEIQACAELLAAQYPEGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHD----VFARLPLRVQEEYGRQYYNKVMESSKALRNPIMWKAENVTHALVHAVTAEKLRPYVVVGIDGRFLMSPLLLLPRRLYNTI 365
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM28695.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 196.1 bits (497), Expect = 2.100e-46 Identity = 122/339 (35.99%), Postives = 182/339 (53.69%), Query Frame = 0 Query: 41 NNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPC--------GPVLITGTSSGFGLDLTLQLAAQGWKVY-ACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKL 371 NN H ++ I +Y ++ G WL+ P F + +YD GF P + ITG +GFG L ++LA +G++VY AC+ A V+ +++DVT+E Q++ A A V+AE PEGLYALVNNAG + G DW GL F+ M+VN++G + +TK LPL+K+ RI+ ++S +G+ G PL YSASKHA E +++SLRQE+R + ++++ INP +H T L + P +QA YG+ Y D + ++P NV R M AVT + R QY VG+DA++ + P R+ KL Sbjct: 9 NNLCHIDLLEEWI-WYSYFTGAWLLGPFMAFLIV----VYDF--CSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENPEGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRC------KGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQYGQSYFEGCRDFVKTHTEDVVFDPINVVRAMEHAVTCTRPRIQYRVGLDAKYGLVWTQIFPLRVGEKL 334
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM28666.1 (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 189.5 bits (480), Expect = 2.000e-44 Identity = 116/336 (34.52%), Postives = 184/336 (54.76%), Query Frame = 0 Query: 36 LLSRLNNFLHSNIYVYLITY-YLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFRKPCGP--VLITGTSSGFGLDLTLQLAAQGWKVYA-CVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLAL-PRRI 367 L++ NN H ++ + Y + FW FW PL G L F + + +P V+ITG +GFG L L L +G+KVYA C+ + + ++ +I+DVT E+Q+ + A + A P+G++ALVNNAG + G DW + F+ M+VNY+ + +TK LP LK K RII ++S +G+ G P+ YS+SKHA E ++++LRQE+R + + ++ INP +H T L +F AP E+Q +YGEEY+ A+ + +P+NV R + A+T+ + + QY VG+DA+ + PFL + P R+ Sbjct: 3 LINWANNVAHIPVFEDMCYYNFFFWAWFW--GPLLGALVFLHDATTGFFFSIFYVEPSEDKVVVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHPQGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLK------KSKGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLGATAEATTRFTETQALDPKNVIRAYVHAITSTRPKVQYRVGIDAKGL-FPFLQIFPLRV 329
BLAST of NO08G01470 vs. NCBI_GenBank
Match: EWM25060.1 (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana]) HSP 1 Score: 174.9 bits (442), Expect = 5.000e-40 Identity = 115/343 (33.53%), Postives = 181/343 (52.77%), Query Frame = 0 Query: 36 LLSRLNNFLHSNIYVYLITYYLFWLGFWLIMPLAGFFTMLGFGLYDLFTAKGFR--KPCG-PVLITGTSSGFGLDLTLQLAAQGWKVYA-CVRKGADLAPFARYPNVKG----LIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKL 371 +L+ +N+ +H I V I ++L+ L+ PL ++ F + L A R +P G VLITG +GFG DL + L +GW+VYA C+ + A + G ++MDVT + I + + E P+ L+A+V NAG + G DW L ++ M+VN + I K LPLLK + RI+N+ S +G+ G P Y+ASKHAAEA+S SLR E+ + + + +NPS+H TR + + + +++ + QA+YG EY L A + + + W+P +V ++ A TA R QY+VG DA F +P + LP + K+ Sbjct: 1210 MLNLMNDIMHLPI-VDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQLFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLK------ESKGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEYGLEY-LRAVQKLTSDQTDGCWDPRHVVNTLVRATTAVSPRTQYIVGADATFCLLPLMNLPTPDIEKI 1544
BLAST of NO08G01470 vs. NCBI_GenBank
Match: XP_002180228.1 (3-hydroxybutyrate dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1] >EEC48419.1 3-hydroxybutyrate dehydrogenase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 140.2 bits (352), Expect = 1.400e-29 Identity = 98/352 (27.84%), Postives = 158/352 (44.89%), Query Frame = 0 Query: 33 PEPLLSRLNNFLHSNIYVYLITYYLFWLGFWLI-MPLAGFFTMLGFGLYDLF-----TAKGFRKPCG------PVLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATV--------EAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGK-EGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALP 364 P P + +LN+ LH + + ITY +FW L+ PLA L + L T K P V++TG +GFG ++ A G+ V+A F P +K + M+V N+ ++ + V E + L+AL+NNAG G DW + F+ +MDVN +G IR K L + K+ G G RI+N+ S +GL P + Y+ASKHAA ++ LR EM F V++ +NPS+H T ++ + + P ++ YG +Y + ++WN V + + + + +G+D RF + +P Sbjct: 5 PGPAVQKLNSVLHRDPF-SSITYAVFWSLVLLVGAPLAIVVLQLQLIVRLLLWVTGQTGKSHYSPRTQSKLEMAVVVTGCDTGFGTEIAFWAAQAGFHVFAGCLLKESFGQFENCPAIKPIQMNVCNDNDVQEVVKQVVTWLDGGGEKKKQRVLHALINNAGIGDGGLIDWLDISVFQRNMDVNCFGMIRTCKAFLSIFKQQAIDGSHRGGRIMNLTSMAGLCPPMAAMAAYAASKHAANVFTRGLRNEMAGFGVQVCSLNPSFHKTPLVTGMQNNITSVYNGLSPTLRNQYGSDYFDTLKISLVDIPHSWSWNTNVVAEQAVSLLEINQLPAEVPIGLDGRFALLILRMIP 355
BLAST of NO08G01470 vs. NCBI_GenBank
Match: XP_002599606.1 (retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae] >EEN55618.1 retinol dehydrogenase, retinaldehyde reductase [Branchiostoma floridae]) HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29 Identity = 98/278 (35.25%), Postives = 152/278 (54.68%), Query Frame = 0 Query: 95 VLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFAR--YPNVKGLIMDVTNEEQIRAAIATV-EAECPEGLYALVNNAGYEQY--GTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLL----ESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALP 364 VLITG +GFG L +L G +V+A A +A + ++ + MDV++ + ++ A V EA +GL+ LVNNAG GTT+W L+ ++ ++VN G I +TKT LPLLK K R++N+ S +G + PL Y+ SK+ EA+S+ LR+ MR F V++ +I P R + D +L ++++ PE +A+YGEE++ A D+ G + F +P V M A+ A R +Y+VG DARF+ +P LP Sbjct: 37 VLITGCDTGFGNLLARRLDQLGLRVFAGCLTEAGVAELRQSCSERLQPIRMDVSSSDSVQDAFRVVKEAVGSKGLHGLVNNAGVTGVFGGTTEWATLEDYQAVLNVNLLGMIDVTKTFLPLLK------KSRGRVVNVASAAGRMAN-PLGVPYTVSKYGVEAFSDCLRRAMRCFGVKVHIIEPG--LFRTDMTNHDIILRRLDQTWQRQTPETKAEYGEEFLQAAKDDIIFGTR-FLQDPVAVVDAMEHALCATHPRSRYVVGWDARFITVPTSWLP 304
BLAST of NO08G01470 vs. NCBI_GenBank
Match: WP_064231540.1 (oxidoreductase [Actinomycetaceae bacterium BA112] >OAP86909.1 short-chain dehydrogenase/reductase [Actinomycetaceae bacterium BA112]) HSP 1 Score: 139.8 bits (351), Expect = 1.800e-29 Identity = 96/283 (33.92%), Postives = 141/283 (49.82%), Query Frame = 0 Query: 95 VLITGTSSGFGLDLTLQLAAQGWKVYACVRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECPEGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYNGRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNMPFLALPRRIMNKLEDGAPFA 378 +LITG SSG G + +LA+QG VY R+ +A Y V + +DVT+EE + A+ V AE + LVNNAGY YG + +D + DVN +G LTK ALP +++ + I+N++S G L + G Y A+K+A EA S++LR E F +++ +I P T A D L ES + E A E Y+G+ +P+ V R + AV A++ RP+YLVG A+ + LP R + + A FA Sbjct: 16 ILITGASSGMGFEAAKELASQGHSVYGAARRVERMAQLTEY-GVHTIELDVTDEEACKDAVGRVVAERGR-IDVLVNNAGYGSYGAIEDVEIDEARRQFDVNVFGLAALTKAALPHMRE-----RRSGTIVNVSSMGGRLVSF-MGGWYHATKYAVEALSDALRMEAAEFGIDVVLIEPGGIKTEWADIAADHLAESSKGGAYEQTA----VKTAEGMRRQYSGKMMS--DPDVVVRAISRAVNAKRPRPRYLVGFGAKPLVAAHAMLPTRAFDWVMKRAVFA 284
BLAST of NO08G01470 vs. NCBI_GenBank
Match: XP_002112787.1 (hypothetical protein TRIADDRAFT_35982 [Trichoplax adhaerens] >EDV24897.1 hypothetical protein TRIADDRAFT_35982 [Trichoplax adhaerens]) HSP 1 Score: 138.7 bits (348), Expect = 4.000e-29 Identity = 85/268 (31.72%), Postives = 138/268 (51.49%), Query Frame = 0 Query: 95 VLITGTSSGFGLDLTLQLAAQGWKVYAC--VRKGADLAPFARYPNVKGLIMDVTNEEQIRAAIATVEAECP--EGLYALVNNAGYEQYGTTDWCGLDYFKLHMDVNYYGPIRLTKTALPLLKKHGKAGKEGARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRRFNVEITVINPSWHATRCALPPKDKLLESFRAAPPEVQADYGEEYVLEAADEAYN-GRQWFTWNPENVGRVMLWAVTAEKYRPQYLVGMDARFVNM 358 VLITG SGFG L+++L G + AC ++G + + +I+DVTN + I A+ V P +GL+ +VNNAG G +W L + +VN +G + +TK LPL+K + RI+N+ S G +P YS SK A EA+S+SLR+EM+ FNV + +I P + T +D+ L+ + ++ DYG+ + E + R + N V + + A+ + K R +YLVG++A +++ Sbjct: 29 VLITGCDSGFGRKLSIELDLCGCNIIACCLTKRGVEDLTSICSNRLYPIIVDVTNSDDIHRAVDLVGKHLPMGKGLWGMVNNAGIASTGAIEWTPLSKLRQIFNVNVFGMVEMTKAMLPLIK------IDQGRIVNLASMLGRF-SVPYSASYSMSKFAVEAFSDSLRREMKLFNVSVHIIEPGFFKTHILDNLEDEFLQLYHNCNSTIRQDYGDHFAKEGVKKITEFNRSRASNNIAKVTKAIKNALFSPKPRERYLVGLEANILSL 289 The following BLAST results are available for this feature:
BLAST of NO08G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01470 ID=NO08G01470|Name=NO08G01470|organism=Nannochloropsis oceanica|type=gene|length=1879bpback to top protein sequence of NO08G01470.1 >NO08G01470.1-protein ID=NO08G01470.1-protein|Name=NO08G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bpback to top Synonyms
Publications
|