NO08G01420, NO08G01420 (gene) Nannochloropsis oceanica

Overview
NameNO08G01420
Unique NameNO08G01420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3909
Alignment locationchr8:428565..432473 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:428565..432473 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO08G01420 vs. NCBI_GenBank
Match: EWM26672.1 (hypothetical protein Naga_100001g50 [Nannochloropsis gaditana])

HSP 1 Score: 234.6 bits (597), Expect = 1.800e-57
Identity = 409/1370 (29.85%), Postives = 537/1370 (39.20%), Query Frame = 0 
Query:    1 MNFDLFKGALNETLQHAKQHMGSALEQAEQLLDGVDARLGDNEEGEFGAMVPSGFEDGMVSPSSYYLDNKEISSSYEYNRSTSSTINDASGYRATSQSFETHK---PLSFSSFSSAANSLAKVGGGLVAVGASMASNDEKEENDDEAVVLDAGHCESNAIPRL--DGRK-VSSSQRKVEQERDELRAEADTLRLALAELEELIEVQQAEKNALGALVREAEERMKXXXXXXXQAEGKAAGRATAMAALKAEVERMGTAMRMQGNEVSDWMARVAQLEAGEKGEVQQLTLALEKSREEQQRMQQEVTVQVREAKEKMVMAVKELALSKEMSEDMKASLVGTTALQERVASLEKDGDKLRQALAAERKEAEKKIGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSASWVEQEGMLISLREEMERHQRQHEDQRLAAEARITSLEGEAA------------------------------------------RTLVEATHKFNEAMEEQNARVVTLEKELAEATVPATVGVAAGGEGGCGKGKNKKSLMRFRVQELEEKLRQAAKETAVARLAAVAENERLKGELVEAXXXXXXXXXXXXXXXXXXXXXXLPEGAVEVERSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKKVERLEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALQIRVLELEGVVDGGTKEGVRTTQALGELKRLEEGLKEAEEGHDEHGSKREE-------EWQEKLREATIALEQVQQQVRCLEEEKERWTEGNCRQEEEVEGLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEGXXXXXXXXXXXXXXXXXXXXXXXXXXHETALFRMKRELDTVMAKGERVDAAEKEVERLVEKRKRDMEEFRRLNSHIREMQVERASEAEA------LGEESEELKVVVLRAQEEQARLELAMQGLRARLEEKEAELAAHETGKGEGMQAAINKLEGELQGKTEAM-----ALLAKSLAEKDAALAAAVDLQDRNDIQDKERFADIQQMLQCKEKEMTAMRAVITELEARLLEGERMSISAAAAAEKQERTVLDLGRRLEMAEAAREQARQELVDASSTSLLPAMVQRASSGLKGIREGGQ--FDIESQQALLLEKDEEAREESFTAPLYRRYPMLARLPPVIDNILSQVRRRFPEQTTWVEENMVRHVNEERARVTYLVLVHVWLLWRLLF 1303
            MNF++ KGA +ETL + KQ+MG+ALEQAEQLLDGVD+RL D E G   A+VP G E+G   PS Y LD+KE  +SY Y+  +S T      YRATS S E+ K   P+SFSSFS AA+SL KVG G +A   S  S D+ EE D +    +  + +S A   L  DG++    +     Q+ D LRAEA+ LR AL E+EEL EV +AEKNALGALVRE+E    XXXXXXX                                                                       +   +V EA+ +M  A KELA  +E SE++ AS   T   +ERVA L  DG    Q LA E  + EK+  E                                                                          +E  + SL  E+ R Q   + QR   E RI + + + A                                          R   EA ++   A+EEQ +R+  LE ELAEA   A +          GKGK+KKSL+R R+Q+LE++LR AA                L+ +L E+                        +GAV  E  +                                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 +++ERL+                                                                                       LQ R+ +LE  V    +E      A      +E        G ++H    EE       EW+EK+R +   L   +Q+V           E    Q+++ E L+                             ++G                          HETALFRMK +L+ +  KG R+D  E E+ERL EKRKRD+EEF+RLN+HI ++Q +RA E E                                                         +Q   N LE  L  K   +                                       +QQ L  KEKE  A+ + ITELE RL EGE   + A  AA+K +  V +L RRL +AE+ R+QARQE+++ASS SL  ++V +   GLK     G    D+ESQQ L   ++EE R ESFTAPLYRRYP+LARLPP IDN LSQVRRR+PEQT WVEEN++ H++E RAR TY  ++H+WLL+ L+F
Sbjct:    1 MNFEILKGAFSETLNNVKQNMGTALEQAEQLLDGVDSRLSD-EGGSLEALVPPGMEEG---PSPYNLDDKE-CTSYNYHADSSIT----GQYRATSHSVESRKRSSPMSFSSFSMAASSLTKVGSGFMAASTSTGSVDD-EECDLDRGYYNKFYDKSTAHGSLQKDGKESTGGADPNQGQDPDRLRAEAEALRHALTEMEELAEVLEAEKNALGALVRESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDSRAKVEEARLQMQAAQKELADVREASENVAASAGATLEREERVAQLTSDG---IQTLALEAGKGEKEHQEQGARICALELDLQRAIAHAERAATSHQDVL------------------------------------------AAREAHIQSLETELSRVQLLEKQQREDMETRIEAEKDQFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLKDEAANQVATALEEQASRMKGLEDELAEA--KAVMAAHRSNGDRVGKGKDKKSLLRARIQDLEKELRHAATXXXXXXXXXXXXXXXLEADLKESRRASE------------------TQGAVAEELRQ-------------EIKTLTERIHDFDDSLSQTKKATVATEEDLRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEREVRVAEAAREAGTHQEIERLQAELAHVVACKDATETSLAQTQDAKNKIEAKLQESEEQRVAALNSAKASEEAKKEMGRLEKELNDAVAALAESREADVAKATQIV--ELQDRIHDLETQVRKAAEENATAMAAAKRAATVENEFHTVRIGLEDHIRTLEEKAQGQVVEWEEKVRGSADRLLAAEQEVAAXXXXXXXLVEKADCQKDDFEKLK---------------------IELKETYKMKG---------------------EAAVAHETALFRMKSQLEALSEKGVRLDQVEGELERLREKRKRDLEEFKRLNAHIHDLQADRAEEMEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEIQTTANALESALDAKAGEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLQQRLVNKEKEANALSSTITELETRLCEGE---LLATLAAQKNQEIVHELERRLSVAESVRDQARQEVLNASS-SLHSSVVVQRGGGLKAATATGDGGVDLESQQLL---ENEEVR-ESFTAPLYRRYPLLARLPPAIDNALSQVRRRYPEQTRWVEENVLIHIDEHRARTTYFFMLHLWLLYMLIF 1230
The following BLAST results are available for this feature:
BLAST of NO08G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26672.11.800e-5729.85hypothetical protein Naga_100001g50 [Nannochlorops... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01420.1NO08G01420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01420.1NO08G01420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01420 ID=NO08G01420|Name=NO08G01420|organism=Nannochloropsis oceanica|type=gene|length=3909bp
ATGAACTTCGACCTCTTCAAAGGCGCGTTGAATGAGACGCTCCAACACGC
CAAGCAGCATATGGGCTCAGCGTTGGAGCAGGCTGAACAGCTCTTAGACG
GGGTTGACGCCCGCCTAGGTGATAACGAGGAGGGGGAATTTGGAGCCATG
GTGCCATCTGGATTTGAGGATGGCATGGTTAGTCCATCTTCATATTACCT
TGACAATAAGGAAATCAGCAGTAGCTACGAGTACAACAGGAGCACTAGCA
GCACCATTAACGACGCTAGCGGCTATCGCGCCACGTCGCAGTCGTTCGAG
ACCCACAAACCACTGTCATTCTCCTCATTTTCTTCGGCAGCGAACAGCCT
GGCAAAAGTTGGGGGCGGACTCGTAGCCGTGGGTGCTTCGATGGCCAGCA
ATGATGAAAAAGAGGAGAACGACGACGAGGCGGTGGTTTTGGACGCAGGC
CACTGTGAAAGCAATGCGATTCCGCGTCTAGATGGTAGAAAAGTCAGCAG
CAGCCAGCGCAAGGTGGAACAGGAGCGCGACGAACTCCGTGCTGAAGCTG
ACACTTTGCGTCTTGCATTGGCCGAGCTAGAAGAATTAATCGAGGTGCAA
CAAGCGGAGAAAAACGCATTGGGGGCGTTGGTCCGTGAGGCAGAGGAGAG
AATGAAGGAGATGCAAGAGCAGATTGATCAGGCGGAGGGGAAGGCCGCAG
GCAGGGCAACCGCAATGGCGGCGCTCAAGGCAGAAGTAGAGCGCATGGGG
ACTGCCATGCGAATGCAGGGAAATGAAGTAAGTGACTGGATGGCTCGGGT
GGCTCAATTGGAAGCGGGAGAAAAAGGCGAAGTTCAACAGCTGACCCTTG
CGCTTGAGAAATCCCGGGAGGAGCAACAGCGCATGCAACAAGAGGTCACA
GTGCAGGTGAGAGAGGCTAAGGAGAAGATGGTGATGGCTGTGAAGGAGCT
GGCTTTGTCAAAAGAAATGTCTGAGGACATGAAAGCCTCGCTTGTGGGCA
CGACGGCCTTACAGGAGAGAGTTGCGTCTCTTGAGAAAGACGGGGATAAG
TTGCGTCAAGCTCTCGCGGCTGAACGGAAGGAGGCGGAGAAGAAGATAGG
AGAGCACCACCAGAAGCAGCAACAACAGCAGGCACAGATTCAGACCATGG
AGGAGGAGATGCAGCTGCTGTTGGCGGAACAAGAGGAAGTGGTCAAAAGC
CACCAGCAAGCTTTAGCAGTAGCACAGGCCAACGCCGAGGGGTTGGAGGA
GGAGCTGGTCCGGATACGGCAGCAGGAGAAGGAGGTGGAAAAGAATGCCG
AAGAACCTTCAGCGTCGTGGGTGGAGCAGGAGGGGATGCTAATTTCGCTC
AGGGAGGAGATGGAGAGGCACCAGCGGCAGCATGAGGATCAGCGTCTCGC
TGCAGAAGCACGCATTACTTCTTTGGAAGGAGAGGCGGCCCGCACGTTGG
TCGAGGCCACTCATAAGTTCAACGAGGCCATGGAAGAGCAAAATGCGCGT
GTGGTAACCTTGGAGAAGGAACTTGCGGAGGCGACAGTTCCCGCCACTGT
TGGTGTTGCTGCCGGGGGGGAAGGGGGATGTGGGAAGGGCAAGAATAAGA
AGAGCTTGATGCGTTTTCGTGTACAAGAACTCGAGGAGAAGTTAAGGCAG
GCGGCGAAGGAGACAGCGGTTGCACGGCTGGCAGCCGTCGCGGAAAATGA
ACGGTTGAAGGGAGAGTTGGTTGAGGCAAAGGCAAAGGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGGACAACAACTGCCG
GAAGGTGCAGTGGAAGTGGAACGCTCAGAGACGGAGTTATTGAAAGCCCG
ATTGCGAGAAGTCGAGGTGCTGCTGGGTCAAGTAGAGGCAGAGGCGAGCG
AGAAGAAGGAAAGGGGAGAGGAGGAGGTCAAGAGTTTGAAGGAGGAGCTT
GCAGCCATGAGGACGGAGAAAGAGGCGATACAGAAGGAGACGCAGGAGAT
GCAAGAGCGGCTCGAGGAGCTAGATGGTCTGGTGCTGGCGCCGGAGGGGG
TTTATACATTGACTGAATCAGCTGCAACAGCTGCAGCGGCAAAGGCGATT
GCGGAGAAGAAGGTAGAGCGGTTGGAAGTTGAGCTGGCAGCGGCGGTGGT
AGGAAGGGAGGAGTCAGAGAGGGAAAAGGAGGAATTGCAGGCATTGATTC
AGGAGCTGCAGGAGGAGCATCGGGTGATGGTGCGTGAAGGGGCTGAAACG
GCGGAAATTGCGGAAGCGGAGATCGGGGGGGTGGAAAAGCAGTTAGAGGA
GGCCTTGGCTGCTCTTGCTGCCGCTGCCTCTGCTGCTGCTGAGCGCGAGG
AGGCAATCAAGTCAGCAGTCGCAGCAGAAAAGGAAGCATTGCAGATTCGG
GTGCTGGAACTTGAAGGGGTAGTGGATGGCGGTACGAAAGAGGGAGTGAG
GACAACTCAGGCTCTTGGGGAGCTGAAACGGCTGGAGGAAGGTTTGAAGG
AGGCTGAGGAGGGGCATGATGAACATGGGAGCAAAAGAGAGGAAGAATGG
CAGGAGAAGTTGAGAGAAGCGACGATAGCGCTGGAGCAGGTGCAACAGCA
GGTGCGGTGTTTGGAAGAGGAGAAAGAGCGGTGGACTGAGGGCAATTGTC
GGCAGGAGGAGGAGGTGGAGGGTCTGCGGGCGCAGGTAGAGGAGGCTAGG
AAGGATGCGAGTGATGCAGCTGTGGCGCTGGGGCAGGTGCAACAGCAGGT
GCGGTGCTTGGAAGAGTTGGAGGGGCGACAGGAGGAGGAGATTGAGAGAC
TGCGGACACAGTTGAAAGAGGCGAAAAAAAGTGCAGGCGAGGTGGCTGTG
GCACATGAGACGGCCTTGTTTAGGATGAAGCGGGAGTTGGACACCGTGAT
GGCGAAGGGCGAGAGGGTCGACGCTGCTGAGAAGGAGGTGGAGCGATTGG
TTGAAAAACGAAAAAGGGACATGGAGGAATTCAGACGGTTAAATAGCCAT
ATCAGGGAGATGCAAGTGGAGCGTGCAAGCGAAGCGGAGGCGCTTGGGGA
GGAAAGTGAGGAGTTGAAGGTGGTGGTACTACGGGCACAGGAAGAGCAAG
CACGGTTAGAGTTAGCGATGCAGGGACTGCGAGCCCGGCTAGAGGAGAAA
GAAGCAGAGCTGGCCGCGCACGAGACAGGGAAGGGGGAGGGAATGCAGGC
GGCGATAAATAAGCTAGAGGGGGAGCTGCAGGGCAAGACGGAGGCGATGG
CGTTGCTTGCCAAGTCGTTGGCAGAGAAAGATGCGGCATTGGCGGCGGCG
GTGGATCTCCAGGACAGGAACGATATTCAGGATAAAGAGCGTTTTGCTGA
CATCCAGCAGATGCTTCAATGCAAGGAGAAAGAAATGACGGCGATGCGCG
CGGTCATCACGGAGCTTGAGGCTCGTTTGTTGGAGGGAGAGCGTATGTCT
ATCTCTGCTGCGGCGGCCGCAGAGAAGCAGGAGCGGACCGTGCTGGACTT
GGGACGACGGTTGGAGATGGCGGAGGCTGCTCGTGAGCAGGCACGACAAG
AGCTTGTGGATGCTTCGTCGACTAGCTTGCTACCTGCGATGGTGCAGCGA
GCGAGCAGCGGCTTGAAAGGAATTCGGGAGGGCGGTCAATTTGATATCGA
GAGCCAACAGGCTTTGCTCTTGGAGAAAGATGAGGAGGCGAGGGAGGAAT
CATTCACGGCGCCATTGTATCGTCGGTATCCGATGTTGGCGCGGTTGCCG
CCGGTCATCGATAACATTTTGAGTCAGGTCCGCAGGCGGTTCCCCGAGCA
GACGACATGGGTGGAGGAGAATATGGTGAGGCATGTGAATGAAGAGCGAG
CCAGGGTGACTTACCTAGTGTTGGTGCATGTGTGGTTGTTGTGGAGGTTG
TTATTCTAA
back to top

protein sequence of NO08G01420.1

>NO08G01420.1-protein ID=NO08G01420.1-protein|Name=NO08G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1303bp
MNFDLFKGALNETLQHAKQHMGSALEQAEQLLDGVDARLGDNEEGEFGAM
VPSGFEDGMVSPSSYYLDNKEISSSYEYNRSTSSTINDASGYRATSQSFE
THKPLSFSSFSSAANSLAKVGGGLVAVGASMASNDEKEENDDEAVVLDAG
HCESNAIPRLDGRKVSSSQRKVEQERDELRAEADTLRLALAELEELIEVQ
QAEKNALGALVREAEERMKEMQEQIDQAEGKAAGRATAMAALKAEVERMG
TAMRMQGNEVSDWMARVAQLEAGEKGEVQQLTLALEKSREEQQRMQQEVT
VQVREAKEKMVMAVKELALSKEMSEDMKASLVGTTALQERVASLEKDGDK
LRQALAAERKEAEKKIGEHHQKQQQQQAQIQTMEEEMQLLLAEQEEVVKS
HQQALAVAQANAEGLEEELVRIRQQEKEVEKNAEEPSASWVEQEGMLISL
REEMERHQRQHEDQRLAAEARITSLEGEAARTLVEATHKFNEAMEEQNAR
VVTLEKELAEATVPATVGVAAGGEGGCGKGKNKKSLMRFRVQELEEKLRQ
AAKETAVARLAAVAENERLKGELVEAKAKAAAAAAAAAAAAAAGGGQQLP
EGAVEVERSETELLKARLREVEVLLGQVEAEASEKKERGEEEVKSLKEEL
AAMRTEKEAIQKETQEMQERLEELDGLVLAPEGVYTLTESAATAAAAKAI
AEKKVERLEVELAAAVVGREESEREKEELQALIQELQEEHRVMVREGAET
AEIAEAEIGGVEKQLEEALAALAAAASAAAEREEAIKSAVAAEKEALQIR
VLELEGVVDGGTKEGVRTTQALGELKRLEEGLKEAEEGHDEHGSKREEEW
QEKLREATIALEQVQQQVRCLEEEKERWTEGNCRQEEEVEGLRAQVEEAR
KDASDAAVALGQVQQQVRCLEELEGRQEEEIERLRTQLKEAKKSAGEVAV
AHETALFRMKRELDTVMAKGERVDAAEKEVERLVEKRKRDMEEFRRLNSH
IREMQVERASEAEALGEESEELKVVVLRAQEEQARLELAMQGLRARLEEK
EAELAAHETGKGEGMQAAINKLEGELQGKTEAMALLAKSLAEKDAALAAA
VDLQDRNDIQDKERFADIQQMLQCKEKEMTAMRAVITELEARLLEGERMS
ISAAAAAEKQERTVLDLGRRLEMAEAAREQARQELVDASSTSLLPAMVQR
ASSGLKGIREGGQFDIESQQALLLEKDEEAREESFTAPLYRRYPMLARLP
PVIDNILSQVRRRFPEQTTWVEENMVRHVNEERARVTYLVLVHVWLLWRL
LF*
back to top
Synonyms
Publications