NO08G01350, NO08G01350 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G01350 vs. NCBI_GenBank
Match: EWM26688.1 (hypothetical protein Naga_100001g40 [Nannochloropsis gaditana]) HSP 1 Score: 141.0 bits (354), Expect = 3.100e-30 Identity = 63/80 (78.75%), Postives = 67/80 (83.75%), Query Frame = 0 Query: 73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSW-----CKHAEED 148 MGGGRWFYFPTHIWTPSGGWF +PKNW+ANTL+ LGGIG+AA STFS SASLERRPIAPAWHIPSQSW C H D Sbjct: 15 MGGGRWFYFPTHIWTPSGGWFPNPKNWRANTLLVLGGIGVAAFSTFSLSASLERRPIAPAWHIPSQSWRLLLSCGHVFRD 94
BLAST of NO08G01350 vs. NCBI_GenBank
Match: CBJ32950.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.4 bits (285), Expect = 3.100e-22 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 0 Query: 73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDSL 152 MGGGR F+FP H+W+P+GGW+ +P +WK NT A GIGLA ++ S+ ERRPIAPA+HIPSQ WCKHA+EDD SL Sbjct: 1 MGGGRHFHFPKHVWSPAGGWWVNPPHWKRNTGFAFVGIGLAFIAIARISSDRERRPIAPAFHIPSQRWCKHAKEDDPSL 79
BLAST of NO08G01350 vs. NCBI_GenBank
Match: GAX15867.1 (hypothetical protein FisN_2Lu418 [Fistulifera solaris]) HSP 1 Score: 105.5 bits (262), Expect = 1.400e-19 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0 Query: 73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDSL 152 MGGG W+Y P +W+P+GGW+ +P NWK NT +A +G+ A+ F S+S ERRPI P WHIPSQ WCKHA EDD L Sbjct: 1 MGGGGWYYVP-KVWSPAGGWWNNPANWKRNTGIAGAVVGILAVGLFQVSSSRERRPIPPPWHIPSQYWCKHAVEDDPRL 78
BLAST of NO08G01350 vs. NCBI_GenBank
Match: OAO16634.1 (hypothetical protein AV274_1631 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 89.4 bits (220), Expect = 1.100e-14 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0 Query: 73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDSL 152 M GG F +P ++W+P+GGW+ NW+ NT +A + ++ F SA++ERRPI P HIPSQ WCKHA+EDD L Sbjct: 1 MSGGTPFRYPKYVWSPAGGWWGQNANWRRNTRIAAVVMVALSIPVFIASANMERRPIPPVRHIPSQYWCKHAKEDDPRL 79
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_019007920.1 (hypothetical protein I206_07556 [Kwoniella pini CBS 10737] >OCF46701.1 hypothetical protein I206_07556 [Kwoniella pini CBS 10737]) HSP 1 Score: 84.0 bits (206), Expect = 4.500e-13 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147 MGGG + FP +WTPSGGW++ P NW NT + + GIG+A + SAS E+R IAP IPSQ W A E Sbjct: 1 MGGGAHYPFPKEVWTPSGGWWSRPSNWATNTAICVFGIGIATFGVWRLSASKEQRHIAPTRAIPSQRWSPQARE 74
BLAST of NO08G01350 vs. NCBI_GenBank
Match: OCF78662.1 (hypothetical protein I204_00604 [Kwoniella mangroviensis CBS 8886]) HSP 1 Score: 84.0 bits (206), Expect = 4.500e-13 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0 Query: 70 AITMGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147 AI GGG + +P +WTPSGGW++ P NW NT + + GIGLA + SAS E+R IAP IPSQ W A+E Sbjct: 4 AIQDGGGAHYPYPKEVWTPSGGWWSRPSNWATNTAICVFGIGLATFGVWRLSASKEQRHIAPTRPIPSQRWSPQAKE 80
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_002297069.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED86797.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 83.6 bits (205), Expect = 5.900e-13 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0 Query: 81 FPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDSL 152 F +W+P+GGW+ +P WK NT+ I +A+ F SA ERRPI P HIPSQ WCKHA+EDD SL Sbjct: 1 FKKQVWSPAGGWWPTPVAWKRNTVACAFCICVASAMIFKVSAEKERRPIPPFKHIPSQRWCKHAKEDDPSL 71
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_014529945.1 (hypothetical protein JH06_0109 [Blastocystis sp. subtype 4] >KNB46502.1 hypothetical protein JH06_0109 [Blastocystis sp. subtype 4]) HSP 1 Score: 83.6 bits (205), Expect = 5.900e-13 Identity = 40/81 (49.38%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 73 MGGGR--WFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDSL 152 M GG F F ++W+P+GGW+ NWK NT +A + F S +LERRPIAP HI SQ WCKHA+EDD SL Sbjct: 1 MSGGTVGMFMFDHYVWSPAGGWWGQNVNWKRNTKIAAVVAFACCIPVFMASINLERRPIAPTRHILSQKWCKHAKEDDPSL 81
BLAST of NO08G01350 vs. NCBI_GenBank
Match: XP_019032531.1 (hypothetical protein L198_03298 [Tsuchiyaea wingfieldii CBS 7118] >ODN99454.1 hypothetical protein L198_03298 [Tsuchiyaea wingfieldii CBS 7118]) HSP 1 Score: 83.6 bits (205), Expect = 5.900e-13 Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 0 Query: 73 MGGGRWFYFPTHIWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEE 147 MGGG + +P +WTPSGGW++ P NWK NT ALGGI +A + SA+ E R IAP IPSQ W A E Sbjct: 1 MGGGGHYPYPKEVWTPSGGWWSRPSNWKGNTAFALGGILVATFGVWRLSANREERHIAPTRPIPSQMWSPQARE 74
BLAST of NO08G01350 vs. NCBI_GenBank
Match: OEU14022.1 (hypothetical protein FRACYDRAFT_188740, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 83.2 bits (204), Expect = 7.700e-13 Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 85 IWTPSGGWFASPKNWKANTLVALGGIGLAALSTFSFSASLERRPIAPAWHIPSQSWCKHAEEDDDSL 152 +WTP GGW+ +P WK NT +A GI + + F SAS ERRPIAP IPSQSWCK A+EDD L Sbjct: 1 VWTPYGGWWVNPPQWKRNTGMAGLGIAVVMMGLFKVSASKERRPIAPYKQIPSQSWCKFAKEDDPRL 67 The following BLAST results are available for this feature:
BLAST of NO08G01350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01350 ID=NO08G01350|Name=NO08G01350|organism=Nannochloropsis oceanica|type=gene|length=1301bpback to top protein sequence of NO08G01350.1 >NO08G01350.1-protein ID=NO08G01350.1-protein|Name=NO08G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=152bpback to top Synonyms
Publications
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