NO08G01270, NO08G01270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G01270 vs. NCBI_GenBank
Match: EWM26662.1 (hypothetical protein Naga_100001g33 [Nannochloropsis gaditana]) HSP 1 Score: 505.4 bits (1300), Expect = 2.000e-139 Identity = 272/460 (59.13%), Postives = 326/460 (70.87%), Query Frame = 0 Query: 33 WVALAA----FRQTLAAIWGHDNIE--VMPHTSLFSAMSRRSLPPMQRP---RPAFHLWPELNPHEHEDRNLGRSRVWQRFSNATG----HSDRVIE-----VDRKTDFQGFLKKERNALELFESNWALTWTRWKPFVSIGAKGMVGATMCLAGAHFGRCVVLFHTMRVTGWPAFQNALVELEKSYSAAREVVKAEVGKVVRPRELLQAVSYELKGVRCLIQESQKALEDGVISKAEAKEILRQAQVDKKKLEYESWCLNQALDSFAALSAAIDTNRLKDAGKGLYTGMVACVASAHSVTVRKLSLAFDLGSILSGNIACVMCSLMERIHSQEMARFLPPETRKFFKMSIQIAGMIQGLLIINTVVPKMSLRISSAALGAAWLSDAIAETVDPWLKAHEGWEPIAGRLPYAVLQVSLTVGGYYVQKHVYPGRFPLLVERFLAPLGFVESRLKDFNGLFKK 475 W +AA + Q+ A WG ++ + SL +R S +R R AFHLW + HEHE R L RS VWQRFSN TG S I+ RK G L +E AL+ E W + KPFVS AK + G TMCL GAH+ RC V+FHTMRVTGWPAF A+ EL +SYSAAREVVK+EV KVVRP EL +AVSYELK V LI+ESQK LEDG +S+ EA EI+R+AQ+DKK+LEYE+WCLNQALDS AAL AAID RL++AGKGLYTG +AC AS+ S+TV KLSLAFDLG IL+ N++CV +LM R HS+E+AR LPPETR+F K+S QI G IQGLLI+NTV+PK+SLRISSAALGAAWL+DAI E DPW++AH+GW P+A LPYAVLQV LT+GGYYVQK VYPG+ PL+VER L+PL F E RL N +F K Sbjct: 11 WFFIAALGSNWLQSHAGRWGDARLQAATLKPRSLLIRDARYSASNYRRASSHRLAFHLWGK--HHEHEGRALERSTVWQRFSNTTGDATNSSSTTIQQLGSFSTRKNPVFGILSQEDLALDKVEQCVCRCWGQCKPFVSTAAKALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPETRRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICDPWIQAHDGWNPMANHLPYAVLQVGLTIGGYYVQKTVYPGKIPLIVERVLSPLAFFEKRLNYLNSMFAK 468
BLAST of NO08G01270 vs. NCBI_GenBank
Match: XP_005856013.1 (hypothetical protein NGA_2076900 [Nannochloropsis gaditana CCMP526] >EKU20350.1 hypothetical protein NGA_2076900 [Nannochloropsis gaditana CCMP526] >EWM26702.1 hypothetical protein Naga_100001g111 [Nannochloropsis gaditana]) HSP 1 Score: 213.4 bits (542), Expect = 1.500e-51 Identity = 133/384 (34.64%), Postives = 212/384 (55.21%), Query Frame = 0 Query: 84 ELNPHEHEDRNLGRSRVWQRFSNATGHSDRVIE-VDRKT-DFQGFLKKERNALELFESNWALTWTRWKPFVSIGAKGMVGATMCLAGAHFGRCVVLFHTMRVTGWPAFQNALVELEKSYSAAREVVKAEVGKVVRPRELLQAVSYELKGVRCLIQESQKALEDGVISKAEAKEILRQAQVDKKKLEYESWCLNQALDSFAALSAAIDTNRLKDAGKGLYTGMVACVASAHSVTVRKLSLAFDLGSILSGNIACVMCSLMERIHSQEMARFLPPETRKFFKMSIQIAGMIQGLLIINTVVPKMSLRISSAALGAAWLSDAIAETVDPWLKAHEGWEPIAGRLPYAVLQVSLTVGGYYVQKHVYPGRFPLLVERFLAPLGFVESRL 466 E N E +L R R Q A ++ + VD T D + +L E+ LE E + + KG VG +M L G HF VV HT+RVTG P Q A E Y AR +K E ++ ++LLQAV YE++ R L+ ES +A +DG ++++EA+E +R+A+++ ++L +SW LNQA S A++AAID ++KD G+YT +AC A+A S T+R LS+ FDL S++S +I + ++ ERI E+ ++LP ET+K M++ + +++GL++++ VVP+++L ISS+ALGA W++D + + +D G + + Y + T G Q H P L++ L P +E+ L Sbjct: 68 EFNEDFQEGIHLVRERALQVKEQAFKLQEKFTDIVDEATLDVREYLGLEKPYLEQLEDRMLNVLQKTAFARQVIVKGCVGLSMVLYGMHFSHLVVFIHTLRVTGLPVMQRAWNEFVDMYGTARRTIKREYPNMLHTKKLLQAVHYEIQSTRKLLHESAEAAKDGKVTESEAREAVRKAKLNLRELNEKSWILNQAFSSMHAVAAAIDFVKIKDLFSGIYTSALACFATASSSTLRGLSIGFDLASLISQHIDHAVQAVAERIPRLEVLQYLPRETQKLLGMTVSLVSVLKGLIVVHFVVPRLTLVISSSALGALWVTDMLVDVMDAGADG-PGTGLLNDKCLYLLSNFFWTAVGCMYQSHREGQDMPRLIQVLLFPAVRLETLL 450 The following BLAST results are available for this feature:
BLAST of NO08G01270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01270 ID=NO08G01270|Name=NO08G01270|organism=Nannochloropsis oceanica|type=gene|length=1649bpback to top protein sequence of NO08G01270.1 >NO08G01270.1-protein ID=NO08G01270.1-protein|Name=NO08G01270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bpback to top Synonyms
Publications
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