NO08G01260, NO08G01260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01260 vs. NCBI_GenBank
Match: EWM26725.1 (n-acetylglucosaminyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 421.4 bits (1082), Expect = 3.600e-114 Identity = 217/445 (48.76%), Postives = 288/445 (64.72%), Query Frame = 0 Query: 1 MASFKDQLAGFKGLRATLEKKEXXXXXXXXXXXXXXXXTKEIGERLLRAGATVRANMLPILGNTAAPITEKRTLALLFLVIDGLPFEDQWREWLRRQDGRTEVKVWVHAKHPEKISSSWVRKRLLPTSYRPAWGSVEITRAELELLRVAIEDPAEMQRFLFASESCLPLLPLDRAADALF-------ATASKSWVKFTNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLALPKLFGQEVWSLFRGVSASDEMYFPTCLAVLGELG-STTQMAAVEGNTPCEGAV-----PNGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINRRLTYCCWGDSPKSPETYQGLPAAVLEKGVKEGCLFIRKFKAGSVSLEEWMRHMQA-QAQGVGGWNHRDEDCDGGXXXXXXXGQSKRERSVVEEGG 432 MASF+DQLAGFKGLRA+LEKKE + +G+RL++AG +R ++L + +KR + LL L+ID LPFE WREW++RQ+G TEVKVW+HAKHP+K++S WV ++L+P S+ PAWGSV+ITRAELELLRVA+ED +++Q FLFASESC+P+ PLD A +LF ++ +SW+ FT+ PNNGYSNQ QF+PL+ G+PS +WKADQWVALTR HA A+LALPK FG+++W +FR SASDEMYFPTCLA+LGE+G S ++ + + C G+V G V+ RRLTYCCWGDSPKSPETY+GLP+ VLE+G++EG L RKFKAG+V LEEW+ HM+A + +G G++ + D G G+ ++R EEGG Sbjct: 1 MASFRDQLAGFKGLRASLEKKEQKDAAMERKNEAARLASLRLGQRLVKAGRFIRNSILLKRSEASGGCIKKRRMGLLILIIDSLPFEPLWREWMQRQNGATEVKVWIHAKHPDKVTSPWVLEKLIPRSFCPAWGSVDITRAELELLRVAVEDASDIQLFLFASESCIPIQPLDTAVKSLFPVETSGTSSRPQSWLHFTDKPNNGYSNQQQFEPLVKAGLPSTCIWKADQWVALTRPHAEAVLALPKAFGEDLWPMFRAASASDEMYFPTCLALLGEIGPSGPKVVTEDAASSCLGSVDGSKKEGGLEKESTLTKSTTGTGLGIEESMPPRAGEGVVNAGGKEQQQPVLRRRLTYCCWGDSPKSPETYEGLPSHVLERGIREGSLLGRKFKAGTVKLEEWLAHMRAMEGKGDEGFHVQGVGKDSGNAGQDAVGRQAKKRR-REEGG 444
BLAST of NO08G01260 vs. NCBI_GenBank
Match: EJK68835.1 (hypothetical protein THAOC_09954 [Thalassiosira oceanica]) HSP 1 Score: 165.6 bits (418), Expect = 3.500e-37 Identity = 127/406 (31.28%), Postives = 171/406 (42.12%), Query Frame = 0 Query: 72 RTLALLFLVIDGLPFEDQWREWL----------------------RRQDGRTE--VKVWVHAKHPEKISSSWVRKRLLPT------------------------------SYRPAWGSVEITRAELELLRVAI---EDPA-------------------------EMQRFLFASESCLPLLPLDRAADALF----------ATASKSWVKFTNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLALP--KLFGQEVWSLFRGVSASDEMYFPTCLAVLGELGSTTQMAAVEGNTPCEGAVPNGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINRRLTYCCWGDSPKSPETY-QGLPAAVLEKGVKEGCLFIRKF-KAGSV 382 R +ALLFL ID LP E W+ WL +R+D T V V HAK PE+I S W+R R L S RP+WGS+EIT+A ++L+ + +DPA + RF+F SESCLP L ALF A KSWV + PNNGY+ QLQ+ + V +P +VWKADQW+ L R HA A+ LP L G+++WS R V ASDE+YFPT +++LG L + +A VE + G G V R++T+C W K+P ++ G V + EGCL +RKF +AGS+ Sbjct: 170 RHIALLFLTIDDLPHEHIWKHWLGPNLDSDAGEKASAQDETQEDSKREDEDTNPIVSVICHAKFPERIKSEWLRARHLMIRDASSNETTETFSNGGGVDNAAVGDSPRFHSRRPSWGSIEITKAMVDLVEEGLRIGDDPAVGRRYLATAPRRSSDGSGTAADINPPVDRFVFVSESCLPAATLREFGLALFGPTDGDERTAAMYDKSWVNARSSPNNGYARQLQWDAIRPVDIPPGNVWKADQWMVLNRVHAEAVAELPGRYLGGRDLWSAMRRVRASDEIYFPTAMSILGILRRPSDVAGVEVDENSSGESCAGDG---------------------------------------VRRRKVTFCDWSMEAKNPASFTAGDWRGVARRARSEGCLVVRKFVRAGSL 536
BLAST of NO08G01260 vs. NCBI_GenBank
Match: GAX09474.1 (hypothetical protein FisN_6Lh147 [Fistulifera solaris]) HSP 1 Score: 141.7 bits (356), Expect = 5.400e-30 Identity = 118/419 (28.16%), Postives = 173/419 (41.29%), Query Frame = 0 Query: 58 LPILGNTAAPITEKRTLALLFLVIDGLPFEDQWREWLRRQDGRTEVKVWVHAKHPEKISSSWVRKRLLPT----------------SYRPAWGSVEITRAELELLRVAIED-------------------------PAE---MQRFLFASESCLPLLPLDRAADALFATASK-------------------------SWVKFTN-----VPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLALPKLF--GQEVWSLFRGVSASDEMYFPTCLAVLGELGSTTQMAAVEGNTPCEGAVPNGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINRRLTYCCWGDSPKSPETYQGLPAAVLEKGVKE-GCLFIRKFK--------AGSVSLEEWMRHMQ 392 LP+ +T+ T+ + +ALL + ID LP+E W+EW + +V + HAK P ++ SSW+R+RLL S+ P WGSV+ITRA ++LL A+E PAE + +F+F SE+CLP+ LD +LFAT + SWV N P N Y QF + + +P WKADQW+ L+R HA A+L L + +++W+ F+ V+ASDEMYFPT LAVL L EG T E V + +TY W + ++P T+ + K ++ GCL RKF G +S +EW + ++ Sbjct: 83 LPLHSSTSD--TKPKHIALLAISIDDLPYEHVWKEWAASSKSQHKVSLLCHAKFPMQVKSSWLRQRLLTEPPKMGRGNSFSDPIFHSHCPEWGSVQITRAMVDLLAAAMEIGRNSSSDREKDDRFTRRRYMIEESLPAEVPLVDKFIFISETCLPVTTLDECIQSLFATNATARRLVGQTRNDDSNATTTRANPWEVSWVNARNRNTPGTPRNKYERD-QFCDIHRM-IPQSMRWKADQWMVLSRPHAAAVLDLDQHLRPHEQLWNSFKHVNASDEMYFPTALAVLQIL--------TEGETSRE----------------------------------------------QVCIQPVTYTDWSEGMRNPATFSASDLRRIVKLARQGGCLLARKFSPKNSSGEHVGDISTDEWRKVLE 443
BLAST of NO08G01260 vs. NCBI_GenBank
Match: GAX15555.1 (hypothetical protein FisN_6Hh147 [Fistulifera solaris]) HSP 1 Score: 137.5 bits (345), Expect = 1.000e-28 Identity = 95/285 (33.33%), Postives = 140/285 (49.12%), Query Frame = 0 Query: 59 PILGNTAAPITEKRTLALLFLVIDGLPFEDQWREWLRRQDGRTEVKVWVHAKHPEKISSSWVRKRLLPT----------------SYRPAWGSVEITRAELELLRVAIED-------------------------PAE---MQRFLFASESCLPLLPLDRAADALF-ATASK------------------------SWVKFTN-----VPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLALPKLF--GQEVWSLFRGVSASDEMYFPTCLAVL 268 P+ ++++ T+ + +ALL + ID LP+E W+EW + +V + HAK P ++ SSW+R+RLL S+ P WGS++ITRA ++LL A+E PAE + +F+F SE+CLP+ LD +LF ATA++ SWV N P N Y QF + + +P WKADQW+ L+R HA A+L L + +++W+LF+ V+ASDEMYFPT LAVL Sbjct: 83 PLPLHSSSSDTKPKHIALLAISIDDLPYEHIWKEWAASSKSQHKVSLLCHAKFPLQVKSSWLRQRLLTEPPKMGRGNSFSDPIFHSHCPEWGSIQITRAMVDLLAAAMEIGRNSNSDREKDERFTRRRYMIEESLPAEVPMVDKFIFISETCLPVTTLDECIQSLFAATATERRLVGQTRNDDSNATVTRANPWEVSWVNARNRNTPGTPRNKYERD-QFCDIHRM-IPQSMRWKADQWIVLSRPHAAAVLDLDQHMRPHEQMWNLFKHVNASDEMYFPTALAVL 365
BLAST of NO08G01260 vs. NCBI_GenBank
Match: XP_002177846.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50660.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 122.5 bits (306), Expect = 3.400e-24 Identity = 85/283 (30.04%), Postives = 129/283 (45.58%), Query Frame = 0 Query: 74 LALLFLVIDGLPFEDQWREWLRRQDGRTEVKVWVHAKHPEKISSSWVRKRLLP----------------TSYRPAWGSVEITRAELELLRVAIE---------DP---------------------AEMQRFLFASESCLPLLPLDRAADALFATASK---------------------------------SWVKFTN-----VPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLALPKLF--GQEVWSLFRGVSASDEMYFPTCLAVLGEL 271 +ALL ++ID +P+E+ WR W Q G + V + HAK+PE++ S +V+ RLL ++ PAWGSV+ITRA ++LL+ + DP + +F+F SE+C+P+ L+ ALF A + SW+ + P N Y + QF I+ +P + WKADQW+ L+R HA A+L + ++W+ F ++ASDEMYFPT LA+LG L Sbjct: 110 VALLAIIIDEIPYEEIWRTW--AQTGASHVSMLCHAKYPERVQSGFVKSRLLTKPPIMGRGHSYAEPEYLTHTPAWGSVQITRAMIDLLKAGMHIATVNDTETDPRFATKRFLMTKKKDVDTSNTIPPIDKFIFVSETCIPVATLEECETALFGAAQQPEETMNSASEMKTVSSTSTLMGNSKPIPNTWKVSWLNARHRSEEETPRNKYEDD-QFGG-ITRNIPGQYRWKADQWLCLSRPHAAAVLRVDANMRASDQLWNAFAKINASDEMYFPTVLALLGIL 388
BLAST of NO08G01260 vs. NCBI_GenBank
Match: XP_005852733.1 (hypothetical protein NGA_2061220, partial [Nannochloropsis gaditana CCMP526] >XP_005856389.1 hypothetical protein NGA_2061210, partial [Nannochloropsis gaditana CCMP526] >EKU19976.1 hypothetical protein NGA_2061210, partial [Nannochloropsis gaditana CCMP526] >EKU23100.1 hypothetical protein NGA_2061220, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 104.8 bits (260), Expect = 7.400e-19 Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0 Query: 152 DPAEMQRFLFASESCLPLLPLDRAADALF-------ATASKSWVKFTNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTH 231 D +++Q FLFASESC+P+ PLD A +LF ++ +SW+ FT+ PNNGYS Q QF+PL+ G+PS +WKADQWVALTR H Sbjct: 1 DASDIQLFLFASESCIPIQPLDTAVKSLFPVETSGTSSRPQSWLHFTDKPNNGYSKQQQFEPLVKAGLPSTCIWKADQWVALTRPH 86
BLAST of NO08G01260 vs. NCBI_GenBank
Match: XP_002290251.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92003.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 103.2 bits (256), Expect = 2.100e-18 Identity = 80/296 (27.03%), Postives = 107/296 (36.15%), Query Frame = 0 Query: 63 NTAAPITEKRTLALLFLVIDGLPFEDQWREWLRR---------------QDGRTE------VKVWVHAKHPEKISSSWVRKRLLPT----------------------------------SYRPAWGSVEITRAELELLRVAI-----------------------------------------------------------EDPAEMQRFLFASESCLPLLPLDRAADALFATA--------------SKSWVKFTNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTH 231 +T + ++R +ALLFL ID LP E W+EWL+ +DG + V V HAK PE+I S W+R+R L S RP WGSVEITR ++L+ + +D + RF+F SESCLP+ LD ALF KSWV + PNNGY+ Q Q+ + +P +WKADQW+ LTR H Sbjct: 210 STESKKKKRRHIALLFLTIDDLPHEHVWKEWLKSSVHNNNNSSLKEKEGEDGTPQDNEGPLVSVLCHAKFPERIKSQWLRQRHLIRLAHRDETKSEDGKTEQKQCDGKSEETTFSPPKFHSRRPEWGSVEITRGMIDLVEEGLRIGAPKGDDAASGNGQGVVVNKHTSYRRYLSTPGDALSEADATDKGDISLSITTSIQTDDDIPPVDRFIFVSESCLPVATLDEVEMALFGPKDTDSNPKTPKKNPYDKSWVNARSTPNNGYARQQQWDKIRPNDIPQNLIWKADQWMVLTRAH 505
BLAST of NO08G01260 vs. NCBI_GenBank
Match: XP_019155234.1 (PREDICTED: uncharacterized protein LOC109152113 [Ipomoea nil]) HSP 1 Score: 85.1 bits (209), Expect = 6.000e-13 Identity = 63/216 (29.17%), Postives = 97/216 (44.91%), Query Frame = 0 Query: 60 ILGNTAAPITEKRTLALLFLVIDGLPFEDQWREWLRRQDGRTEVKVWVHAKHPEKISSSWVRKRLLPTSYRPAWGSVEITRAELELLRVAIEDPAEMQRFLFASESCLPLLPLDRAADALFATASKSWVKFTNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLA----LPKLFGQEVWSLFRGVSASDEMYFPTCLAVLGELG 272 +L NT A + + +A LFL LPFE W + + +G+ + + P ++S +V + + SY AWG + + AE LL A++DP E F+ SESC+PL D + L T + S+V N + G ++ + + + K QW + R HA+ +LA K S G SDE Y PT +L G Sbjct: 99 VLMNTPAVVPKSPKIAFLFLTPGALPFEKLWDRFFQGHEGKFSIYIHASKDRPVRLSRYFVDREI--RSYAVAWGKITMVDAERRLLANALKDP-ENLHFVLLSESCIPLRDFDYTYNYLMYT-NVSFV--DNFSDPGVHGHGRYNERMGPVIEKKDFQKGAQWFTMKRQHAVIVLADYLYYSKFHDYCKPSKEDGYCYSDEHYLPTFFNMLDPAG 308
BLAST of NO08G01260 vs. NCBI_GenBank
Match: XP_009041701.1 (expressed protein [Aureococcus anophagefferens] >EGB03626.1 expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 84.0 bits (206), Expect = 1.300e-12 Identity = 92/205 (44.88%), Postives = 113/205 (55.12%), Query Frame = 0 Query: 191 TNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHALALLALPKLFGQE---------VWSLFRGVSASDEMYFPTCLAVLGELGSTTQMAAVEGNTPCEGAVPNGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVINRRLTYCCWGDSPKSPETYQGLPAAVLEKGVKEGCLFIRKFKAGSVSLEEW 387 T PNNGY+ Q+Q+ + V + VWKADQWV L+R HA A L +E +W L R +A DE+ FP LA+ G L P+G+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXX V RRLT+C W + KSP+T+ L AAV+ +GCLF RKFK V ++ W Sbjct: 4 TGRPNNGYALQVQWAK-VHRSVDAAHVWKADQWVVLSRLHAEAAARLDGCARREARHRDDAEPLWRLLRKCTAPDELLFPVSLALCGVLRR-----------------PDGAD-EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPRETTAVDGRRLTWCDWSQNGKSPKTFAALDAAVVAAANVDGCLFARKFK-DPVPVDAW 188
BLAST of NO08G01260 vs. NCBI_GenBank
Match: POE67795.1 (hypothetical protein CFP56_31468 [Quercus suber]) HSP 1 Score: 80.9 bits (198), Expect = 1.100e-11 Identity = 50/163 (30.67%), Postives = 79/163 (48.47%), Query Frame = 0 Query: 74 LALLFLVIDGLPFEDQWREWLRRQDGRTEVKVWVHAK-----HPEKISSSWVRKRLLPTSYRPAWGSVEITRAELELLRVAIEDPAEMQRFLFASESCLPLLPLDRAADALFATASKSWVKFTNVPNNGYSNQLQFQPLISVGVPSESVWKADQWVALTRTHA 232 +A LFLV LP + W + + D + +++H++ SS++ R L S + WG + AE LL A+EDPA QRF+ S+SC+PL +A+ ++ F N+ N+ ++ P +S +P E K QW+AL R HA Sbjct: 193 IAFLFLVRKDLPLDFLWGAFFKNGDA-ANLSIYIHSEPRFVFDETTTSSAFFYGRQLTNSIQVVWGESSMIMAERLLLEKALEDPAN-QRFILLSDSCIPLYEFSYIYNAVMSSPKSFVDSFINI------NEDRYDPKMSPAIPEEKWRKGSQWIALVRRHA 347 The following BLAST results are available for this feature:
BLAST of NO08G01260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01260 ID=NO08G01260|Name=NO08G01260|organism=Nannochloropsis oceanica|type=gene|length=1359bpback to top protein sequence of NO08G01260.1 >NO08G01260.1-protein ID=NO08G01260.1-protein|Name=NO08G01260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bpback to top Synonyms
Publications
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