NO08G01220, NO08G01220 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01220 vs. NCBI_GenBank
Match: EWM26734.1 (nadh-cytochrome b5 reductase 2 [Nannochloropsis gaditana]) HSP 1 Score: 541.2 bits (1393), Expect = 3.900e-150 Identity = 278/396 (70.20%), Postives = 317/396 (80.05%), Query Frame = 0 Query: 180 RGGNNP--SSLQLPRTSELQRRMTFLSPSLIAHRQSTVRSSRSSTALAAFKRLPLGAGVSVSLDKPSLPKGIRPGAGQAPHFVWVLAGVTLALLLLGKLPGVGLVNGAVRDFCERNNLDIYDKLAYRLRLLKGRLERITDGLKRRWLTAFPREVDILPSTSYPVALTLVERSNIGGSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEVVSEKNNPDDPSVRILDTLAIGETIQATPGVRLTNRHPGPINKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERDLFMGDLAANSQFRMSIPPPSTDTLVLVAGPEYFTTKAIDYLTKSGYVEDVIVTL 574 +GG NP S++ P T L+ R ST +RSS ALAA K +PLGAG+SVSLDKP L K + AG+ P VW G+ LALLL+ K PG GL+N VRDFCER + D+Y++L YRLRLLKG LER++ L+RRWLT FP EVD+LPST+YPV LTL ERSNIGGSFL+YKFA PRP HVM+LDLGQ + LIG+TPE+RVMRAAFVP S GE GV+EVV+EKNNP+DPSV+IL TLAIGE+IQATPG RLTNRHPGPINKLLI+VSKLG+VPALQFL ALLP+ GYSVDFANVVWVNERQDQYILQ +LQ LFY+YNSKLDV+TVAERDLFMGDLA N QFR SIPPPS +TLVLVAGPEYFT K +DYLTKSGY EDVIV L Sbjct: 94 QGGLNPVLDSIRRPLTGGLE-----------IWRGSTAH-ARSSIALAAPKHVPLGAGLSVSLDKPVLHKRLARSAGKVPQLVWTAVGLALALLLVAKTPGWGLLNARVRDFCERRHWDVYERLVYRLRLLKGHLERLSAALRRRWLTLFPPEVDVLPSTAYPVPLTLQERSNIGGSFLRYKFAFPRPLHVMDLDLGQSVILIGNTPEDRVMRAAFVPSSAPGERGVLEVVAEKNNPEDPSVKILGTLAIGESIQATPGARLTNRHPGPINKLLIIVSKLGIVPALQFLNALLPSAGGYSVDFANVVWVNERQDQYILQNDLQDLFYRYNSKLDVYTVAERDLFMGDLAHNPQFRASIPPPSKETLVLVAGPEYFTAKVVDYLTKSGYAEDVIVAL 477
BLAST of NO08G01220 vs. NCBI_GenBank
Match: CBJ30027.1 (Cytochrome b5 reductase domain-containing protein [Ectocarpus siliculosus]) HSP 1 Score: 163.7 bits (413), Expect = 1.700e-36 Identity = 108/291 (37.11%), Postives = 156/291 (53.61%), Query Frame = 0 Query: 301 LAYRLRLLKGRLERITDGLKRRWLTAFPREVDILPSTSYPVALTLVERSNIG-GSFLKYKFALP-RPTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEVVSEKNNP----DD--PSV-------RILDTLAIGETIQATPGVRLTNRHPG---PINKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERDLFMGDLAANSQFRMSIPPPSTDTLVLVAGPEYFTTKAIDYLTKSGYVEDVIVTL 574 L Y R+ G L ++W AF E +LP+ + V TL+E+ G G +Y+F LP P V+ L+LGQ++TL G +V++ +VP + R + G EVV K DD P+ R LD L +G+ I PG R + G PI L++V + +GVVP +Q + LLP++S SV A+VVW+NE+ + + L EL+ F++ + KLDV + ERDLF L AN+ + P TL VAGP++FT K DYL + GY ED I+ L Sbjct: 147 LRYGARVWAGSLGSWASRRSQQWAEAFGPEAVVLPANDWSVC-TLLEKVREGDGGLYRYRFGLPSSPDAVLPLELGQELTLCGLDASNQVVQGNYVPLTPRKQRGAFEVVVMKATDGAELDDGLPTTRSNREFSRFLDNLPLGDEIAVKPG-RAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSS-SVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434
BLAST of NO08G01220 vs. NCBI_GenBank
Match: XP_002179170.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48993.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 111.3 bits (277), Expect = 1.000e-20 Identity = 103/385 (26.75%), Postives = 177/385 (45.97%), Query Frame = 0 Query: 211 RQSTVRSSRSSTALAAFKRLPLGAGVSVSLDKPSL-----PKGIRPGAGQAPHFVWVLAGVTLALLLLGKLPGVGLVNGAVRDFCERNNLDIYDKLAYRLRLLKGRLERITDGLKRRWLTAFPREVDILPSTSYPVALTLVERSNIGGS-FLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVP--CSERGEPGVMEVVSEKNNPDDPSVRI-----------LDTLAIGETIQATPG-VRLTNRHPG-PINKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNER-QDQYILQEELQALFYKYNSKLDVFTVAERDLFMGDLAANSQFRMSIPPPSTDTLVLVAGPEYFTTKAIDYLTKSGYVEDVIVTL 574 R S+V SS + R+P A V V++D+P + KG A + + G A+ L L V + + R++ I + L RL+ GR++R+ + +R P D + + + TL + +G S F++Y F LP P +V+ LDLGQQI+++ + V + F S +PG ++ + ++ + I + +G+ I PG ++L+ R P+ ++ + G+VP L ++A+LP S SV +VVW+NE +D + E L+ +YKY+ KL V V + + L N++ ++P + T+ ++AGP KAI +L GY D I L Sbjct: 53 RTSSVEVQMSSPGV----RVP-RASVRVAIDQPLISDTFFTKGAAAKATARTGILQTVTGALSAISLRTVLTTVFV--ALLATILVRSSSSIAETLGKTFRLVSGRVQRVWERF-QRVDEGIPMPFDEKANDGWGIC-TLKSKERLGKSNFMQYTFDLPEPDYVLPLDLGQQISMMCLDDDGDVAQGDFFSYNLSASPKPGSFTILFPTGSHEENTCSIGSSGANFLRALKQDVKVGDEIALKPGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADSS-SVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427
BLAST of NO08G01220 vs. NCBI_GenBank
Match: XP_002293191.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89652.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.3 bits (277), Expect = 1.000e-20 Identity = 75/245 (30.61%), Postives = 127/245 (51.84%), Query Frame = 0 Query: 344 TLVERSNIGGSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVPCS-ERGEPGVMEVV----SEKNNP------DDPSVRILDTLAIGETIQATPGVRLTNRHPG---PINKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVN-ERQDQYILQEELQALFYKYNSKLDVFTVAERDLFMGDLAANSQFRMSIPPPSTDTLVLVAGPEYFTTKAIDYLTKSGYVEDVIVTL 574 TL + IG +F Y+FALPR + + L LGQQI E+ V+ +F P GE GV+ VV K N + +L + G+ + PG + T + G P+ ++ + S LG+VP + +KA+ P + SV +VVW+N +R D + +EL++ + KY++KL V + + D+ + N++ ++P + T+ +++GP+ F+ KA YL + GY E+ I L Sbjct: 203 TLKSKKKIGNTFTVYEFALPRSDYTVPLALGQQIDFCCLGLEDNVVSGSFYPYDMNDGERGVVRVVVPNQDAKGNAALVGLGSSKFIEVLHEMRQGDEVALKPG-KTTLEYRGERVPVTDMVYIASGLGIVPIVDQVKAITPKGTS-SVKVTSVVWINDQRSDFDLAMDELESEYTKYSTKLAVSCIMD-DVMKNPMEGNAEVEEAVPYFNAGTMAVISGPKRFSEKAKAYLMRKGYPENCICVL 444
BLAST of NO08G01220 vs. NCBI_GenBank
Match: XP_009038906.1 (expressed protein [Aureococcus anophagefferens] >EGB06327.1 expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 102.8 bits (255), Expect = 3.500e-18 Identity = 88/299 (29.43%), Postives = 129/299 (43.14%), Query Frame = 0 Query: 305 LRLLKGRLERITDGLKRRWLTAFPRE-VDILPSTSYPVALTLVERSNI----GGSFLKYKFALPR-PTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEV-------------VSEKNNPDDPSVRILDTLAIGETIQATPGVRLTNRHPG--PINKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERDLFMGDLAANSQ----FRM------SIPPPSTDTLVLVAGPEYFTTKAIDYLT-KSGYVEDVIV 572 L+L G++ D LK W F E + +L T P L E G ++ Y+FAL + V+ L+LGQ++T +G R +RA+F S R + G +EV V V D L IG PG R PI L +LG +P +Q LK LP ++ A V W+NE +D + L E L+ LFYK+ K+++ V + L D N+ FR ++ P L +VAGP+ F + + +LT GY + IV Sbjct: 67 LKLRAGQVRATADALKLAWSDLFEDESLVVLEDTWAPCVLEATEDFGDDGAGGAAYTAYRFALKQGGKAVLPLELGQEVTFVGLDGRNRPVRASFPLASNRRDAGAVEVVVAAPGRRRAREAVGGLTAEQRAVVDAFDGLGIGGEAAVRPGRRAFTYEGSYLPITSLQCFAEELGALPVIQLLKESLPRGRS-TIAKAQVFWINEGEDDFGLYEGLETLFYKFPKKMELACVVDDKLHSPDTTKNAPGDAVFRRNDDLAGAVAPWQPGMLAVVAGPDAFQDQVVAHLTGAKGYPPECIV 364
BLAST of NO08G01220 vs. NCBI_GenBank
Match: EJK50636.1 (hypothetical protein THAOC_30329 [Thalassiosira oceanica]) HSP 1 Score: 92.4 bits (228), Expect = 4.800e-15 Identity = 64/235 (27.23%), Postives = 119/235 (50.64%), Query Frame = 0 Query: 353 GSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAF--VPCSERG----EPGVMEVVSEKNNPDDPSVRIL----DTLAIGETIQATPG---VRLTNRHPGPINKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQY-ILQEELQALFYKYNSKLDVFTVAERDLFMGDLAANSQFRMSIPPPSTDTLVLVAGPEYFTTKAIDYLTKSGYVEDVIVTL 574 GSF Y+F LP + + L LGQQ+ + + + +F + RG G + VV + ++ + + + + L G+ + PG + +H P+ ++ + S LG+VP L ++A P S SV ++V+W+N+++D + + ++L+A + KY++KL V + + G L N + ++P + T+ +V+GP+ F KA YL K GY ++ I L Sbjct: 187 GSFTIYEFDLPESYYTIPLGLGQQLDFCCLSSNDDICTGSFYLFEGNVRGMGGPTSGSVRVVVANDEKEEGNAKFMSVLRNELEPGDEVAIKPGKSHLAYGGQHV-PVTDMVYLTSGLGIVPILDQIRATSPKGSS-SVKVSSVIWMNDKRDDFDLAMDDLEAEYMKYSTKLAVSCIMDDSASSGTLEGNREVEEAVPYFNPGTMAVVSGPKRFADKAEGYLMKRGYPKNCICVL 419
BLAST of NO08G01220 vs. NCBI_GenBank
Match: BAF82791.1 (unnamed protein product [Homo sapiens]) HSP 1 Score: 85.9 bits (211), Expect = 4.500e-13 Identity = 68/267 (25.47%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 335 PSTSYPVALTLVERSNIGGSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEVVSE---KN-NPDDPS----VRILDTLAIGETI-QATPGVRLTNRHPGPI---------------NKLLIVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERD----LFMGDLAANSQFRMSIPPPSTDTLVLVAG-PEYFTTKAIDYLTKSGYVEDVIVT 573 P YP L L+E+ I + +++F LP P HV+ L +G + L+ E V+R A+ P S + G M+++ + KN +P P + L+ + IGETI P RL PG + + L ++ G+ P LQ ++ + S + ++++ N+ ++ ++++EL+ + + + D++ +R + + +PPP+ TL+LV G P T A L K GY +D+I T Sbjct: 14 PEAKYP--LPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVR-AYTPVSSDDDRGFMDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTSEPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRT--RMSLIFANQTEEDILVRKELEEIARTHPDQFDLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFT 275
BLAST of NO08G01220 vs. NCBI_GenBank
Match: XP_003819159.1 (PREDICTED: NADH-cytochrome b5 reductase 2 isoform X2 [Pan paniscus] >XP_008970718.1 PREDICTED: NADH-cytochrome b5 reductase 2 isoform X2 [Pan paniscus] >XP_008970719.1 PREDICTED: NADH-cytochrome b5 reductase 2 isoform X2 [Pan paniscus] >XP_008970720.1 PREDICTED: NADH-cytochrome b5 reductase 2 isoform X2 [Pan paniscus] >XP_008970721.1 PREDICTED: NADH-cytochrome b5 reductase 2 isoform X2 [Pan paniscus] >XP_008970722.1 PREDICTED: NADH-cytochrome b5 reductase 2 isoform X2 [Pan paniscus]) HSP 1 Score: 85.9 bits (211), Expect = 4.500e-13 Identity = 69/267 (25.84%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 335 PSTSYPVALTLVERSNIGGSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEVVSE---KN-NPDDPS----VRILDTLAIGETI-QATPGVRLTNRHPG-----------PINKLL----IVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERD----LFMGDLAANSQFRMSIPPPSTDTLVLVAG-PEYFTTKAIDYLTKSGYVEDVIVT 573 P YP L L+E+ I + +++F LP P HV+ L +G + L+ E V+R A+ P S + G ++++ + KN +P P + L+ + IGETI P RL PG P KL ++ G+ P LQ ++ + T + ++++ N+ ++ ++++EL+ + + + D++ +R + + + +PPP TL+LV G P T A L K GY +D+I T Sbjct: 19 PEAKYP--LPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVR-AYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPKGRLFYHGPGNLGIRPDQTSEPKKKLADHLGMIAGGTGITPMLQLIRHI--TKDPSDMTRMSLIFANQTEEDILVRKELEEIARTHPDQFDLWYTLDRPPIGWKYSSGFVTANMIKEHLPPPGKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFT 280
BLAST of NO08G01220 vs. NCBI_GenBank
Match: XP_008970717.1 (PREDICTED: NADH-cytochrome b5 reductase 2 isoform X1 [Pan paniscus] >XP_014202167.1 PREDICTED: NADH-cytochrome b5 reductase 2 isoform X1 [Pan paniscus]) HSP 1 Score: 85.9 bits (211), Expect = 4.500e-13 Identity = 69/267 (25.84%), Postives = 123/267 (46.07%), Query Frame = 0 Query: 335 PSTSYPVALTLVERSNIGGSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEVVSE---KN-NPDDPS----VRILDTLAIGETI-QATPGVRLTNRHPG-----------PINKLL----IVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERD----LFMGDLAANSQFRMSIPPPSTDTLVLVAG-PEYFTTKAIDYLTKSGYVEDVIVT 573 P YP L L+E+ I + +++F LP P HV+ L +G + L+ E V+R A+ P S + G ++++ + KN +P P + L+ + IGETI P RL PG P KL ++ G+ P LQ ++ + T + ++++ N+ ++ ++++EL+ + + + D++ +R + + + +PPP TL+LV G P T A L K GY +D+I T Sbjct: 74 PEAKYP--LPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVR-AYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPKGRLFYHGPGNLGIRPDQTSEPKKKLADHLGMIAGGTGITPMLQLIRHI--TKDPSDMTRMSLIFANQTEEDILVRKELEEIARTHPDQFDLWYTLDRPPIGWKYSSGFVTANMIKEHLPPPGKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFT 335
BLAST of NO08G01220 vs. NCBI_GenBank
Match: XP_009458129.2 (NADH-cytochrome b5 reductase 2 isoform X1 [Pan troglodytes]) HSP 1 Score: 85.1 bits (209), Expect = 7.700e-13 Identity = 69/267 (25.84%), Postives = 122/267 (45.69%), Query Frame = 0 Query: 335 PSTSYPVALTLVERSNIGGSFLKYKFALPRPTHVMELDLGQQITLIGSTPEERVMRAAFVPCSERGEPGVMEVVSE---KN-NPDDPS----VRILDTLAIGETI-QATPGVRLTNRHPG-----------PINKLL----IVVSKLGVVPALQFLKALLPTTSGYSVDFANVVWVNERQDQYILQEELQALFYKYNSKLDVFTVAERD----LFMGDLAANSQFRMSIPPPSTDTLVLVAG-PEYFTTKAIDYLTKSGYVEDVIVT 573 P YP L L+E+ I + +++F LP P HV+ L +G + L+ E V+R A+ P S + G ++++ + KN +P P + L+ + IGETI P RL PG P KL ++ G+ P LQ ++ + T + ++++ N+ ++ ++++EL+ + + + D++ +R + + +PPP TL+LV G P T A L K GY +D+I T Sbjct: 74 PEAKYP--LPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIGNELVVR-AYTPVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPKGRLFYHGPGNLGIRPDQTSEPKKKLADHLGMIAGGTGITPMLQLIRHI--TKDPSDMTRMSLIFANQTEEDILVRKELEEIARTHPDQFDLWYTLDRPPIGWKYSSGFVTADMIKEHLPPPGKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFT 335 The following BLAST results are available for this feature:
BLAST of NO08G01220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01220 ID=NO08G01220|Name=NO08G01220|organism=Nannochloropsis oceanica|type=gene|length=3121bpback to top protein sequence of NO08G01220.1 >NO08G01220.1-protein ID=NO08G01220.1-protein|Name=NO08G01220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=574bpback to top Synonyms
Publications
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