NO08G01150, NO08G01150 (gene) Nannochloropsis oceanica

Overview
NameNO08G01150
Unique NameNO08G01150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3159
Alignment locationchr8:359654..362812 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:359654..362812 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01150.1NO08G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|360641gene_3444Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01150.1NO08G01150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01150 ID=NO08G01150|Name=NO08G01150|organism=Nannochloropsis oceanica|type=gene|length=3159bp
AGTGATCTTCCGTCAATGCGATCGACTACTCCCCCTGCACTGTCCATGAA
ATGAGCCTCCCCCCTAATCACCACCTCCAAGAGTTTTCACCGCTCCAAAC
CGCCACAATTTCGCCATCCTCTCCACGCCTGATCCTGGTCAAGCATCGGC
AAGCCATCCATCGCGTTGGGATTTATCCAGgtatgcatctcgaatactgt
ctggcagaggaaaagtccgaccacggccattaaaaatgcttttagatttg
ataaatgctgtaacagaggctgactgtaagaagaaaagattccatatttc
tgtctcatggcaataaatcaatgcccccttctcatcgttcatggcctccg
caaacctccgccttcgtcggcatcctttctctatcccccttgccctttcc
cacacctctccacagGCTTGTCCGCGCTAGAACTATCCAAACTCTTGACT
GCAGCGTTTAAATTAGGAGGATTAGCCTCCCCATCGCACCATGCTACGGC
CCCTCCCTCCTTTGCCATGCCCGCCGTCGTCGGCTTTCAAGACGAGGCCA
CCGGGGTGATCTTCCCCATCAGTCTTGCCTGCAGTAGCGGCCTCCCGGTC
GGGGCCGGCGTGTGCTACCGCCTTCTCCTAACGGGTTCGGAGGATTTCCT
ATGTCCTTCTCCTATCTTTCTCGACTCGCAGTACCACCACCATCACCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCACCTGCACCCGCAGAGAGACCAA
TATTGCAACCCTACTTTATCGCCACGGCAAGCCGATCAGGCATCTTTCCC
CGTGCCTCCCCCCGCCATCGGTGCCAAGACTGTGAAGAAGAGAGCTAAGG
CGCCGATAGGAACGACACCGGTGACGACGATCACCACCAAGGAAGGAAAC
ACGTCTTATCACTCTGCAGTCACAAACGCAAGCAACAACAAAACCAGAAC
AGAGCTAGGAGGCACTCCCCGCCGCAACAAGAAACTCCACCGTTTCATCT
CTAACCTCCTTAGCAGAAAGATTCTGCCTTATGAGGAAGCGCAAGTCCTC
TTCTCGCTCTTAAATGCGAATCACTTGGTGGTATGTGCGGCCTATCGAGT
CGCCCAGCACCGCCGCCAGGACAAAGAACTCCTTACCTCACTCATGCGCA
ACATCGCCCAAGTCATCTTAGGGGAAGGACAGACAAGAAAATACGGAGAG
GAGGAAGGAGATGAAGAGGGTTCGTCGCTCACGACTTTGGAGGTAATGGA
GGACATGCTTGTGGCGTTGGATCTTTTTCGGCACAAGCCCTCTCCCTTCT
ACTCGTCCTCCCCGTCCTCCTCGTATCCCTTCTCTTCCTCCTCGAGCGCC
AAGCATCAGCAGTTGCAGCAGCAACCATTGCAGCTGACAACGACGCAGCT
GGTAACATTGGAGCATATGATCATCACACAGGAGGAGAGAGTGTACGAAG
TGTTTAGGTTGAGGTCAGAGACGGGAGATGAGGAAGCGTTTGTAGGGGAA
TTAAGGGCATTGGCGGAGGGGATAAGAGAAACATCCAGGCCTGCTAGAGG
AGGAAAGGGAAAGTGGGAAGAAATGTGCAGGCCCGCGACGGCGCCAGCAA
AGGTGAAAATGGGAGAAATGTGCAGCGGCAGTGGTCGAACCAAGGAGGAG
GGGGAGCAGTCTGTCGCGGCGGATACGGCACCGACGAGCAGCACAAGCAC
AAATAGGGTTAAGAACAGTAGCAGTATCCAACTAGGGGCTCTCCCCTCCC
AGCATAGTCACTCCACCCATGATGCACATGGACCCCAATTGCGCACACAT
CTGAAAAGTAACAACAAAAGCAGCAGCAGCAGCAGTATGAAGCAATATCA
GCAGCATTATCACCACGAACATCACCATCATCATCATCAGAGGCAGGATA
CGGGAAAGAACGAAGAGGAAAGGCGGCATCGTGGGACGACCACCACGGCA
ACGAGAAACAGCAGGAACGTAAGCAGCACTAATGCCACCACCACTAACAG
CAACGGCAGCAGCAGCAGCATCAAGGTATCCTTTCCTCCTCCTCCTCCTC
CTCCTCCAGTTCCTCCTCCTCGGCCCCGACGAAAACCCCTCGAATCCATC
ATCCGCAGCTTAGAGAAAAGTGTGAAGCTTCGGCCCATATTCATCGAGTG
GTTACTGCGGCGGTACCGGGCCGGAGACGAGTACGTGGAGGCGGCCTACG
AAAACTACAGGCTCGATGGCGACGAAGAAGAACTGATCGACTCCTTACGG
CGCCTGTTGAAAGTACGGGTGGAGGGAATGAAGATGCGACAGAAGCGACA
GCAGCAGCAGGGAGGGAGCGACGGAGGGGTGCCTGAGGAAGTTACAAGTG
CCATTGTGAAGGCGGTGGAGTCGGGGACGTTGACGGAGGACCAAGGGAAG
ATGCTGGAAAATTTATATGTAGGGGGGCATGAAGTGGTGAGATCAGCCTG
GGAGATTTATAGGAGAGAGAAGGACGGGAGGCAGCTTGTGGAGAGGTGGA
AACGGATCGCGAGGATTGTGGCAGCGGCTGAGGGGAAGTCTTCGGATAGA
CGAAGAGTGGGGAGAGGAGGAGAGCGAGGTGGAAGAGGAGGAGGAGGAAG
AGCAGGAGCAGATGCAAAAAGAAAAGAGGCGAATGAAGGAGCACGACTGT
CGGCAAGGCAGGCGATCATAAAGCAGAGTTTAGAGTTGCTGGTGGCACGG
CGGAAGGTGCAAGTTCCGGGTATCCGGTTGTTGACTCATTTGTTCGAGTC
GGGAGACACGTTGTTGAAAGAGACGCTGGACATTTTCTTACAGGATCAGG
ACGTCGAAGGCTTGCTTGGGCGATTGTTGAGGATTCTGGAGGAGGGAGAT
GTTTCGAGTGCCCCTCCTGCGTGTGTGACCTCGGTTTCGTCTCCTTTTAT
TTCGTCGAATCAAAGCTTTTCGACTCCCCCCCCTGCTGCTATCCCACGGA
CGCACCAAATCCCTGCGATGCTGTCGCCCTTGACGGTGTCAGAAGCGGAC
ACGATAAAGAAGAAGGAGGGGATGAAAAAGGAGATGGAGGAGGAGGAGGA
AGAAGAGGTAGACGAAATGCGGAGCTTTGTGAGTGATAAGGCGAATAAAT
CTTTTGCTCCCTCCTTGGCTTTAAATGACAGCCTTCTCACCCAAGACAAT
GACCCTTAA
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protein sequence of NO08G01150.1

>NO08G01150.1-protein ID=NO08G01150.1-protein|Name=NO08G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=958bp
MSLPPNHHLQEFSPLQTATISPSSPRLILVKHRQAIHRVGIYPGLSALEL
SKLLTAAFKLGGLASPSHHATAPPSFAMPAVVGFQDEATGVIFPISLACS
SGLPVGAGVCYRLLLTGSEDFLCPSPIFLDSQYHHHHQQQQQQQQQQHLH
PQRDQYCNPTLSPRQADQASFPVPPPAIGAKTVKKRAKAPIGTTPVTTIT
TKEGNTSYHSAVTNASNNKTRTELGGTPRRNKKLHRFISNLLSRKILPYE
EAQVLFSLLNANHLVVCAAYRVAQHRRQDKELLTSLMRNIAQVILGEGQT
RKYGEEEGDEEGSSLTTLEVMEDMLVALDLFRHKPSPFYSSSPSSSYPFS
SSSSAKHQQLQQQPLQLTTTQLVTLEHMIITQEERVYEVFRLRSETGDEE
AFVGELRALAEGIRETSRPARGGKGKWEEMCRPATAPAKVKMGEMCSGSG
RTKEEGEQSVAADTAPTSSTSTNRVKNSSSIQLGALPSQHSHSTHDAHGP
QLRTHLKSNNKSSSSSSMKQYQQHYHHEHHHHHHQRQDTGKNEEERRHRG
TTTTATRNSRNVSSTNATTTNSNGSSSSIKVSFPPPPPPPPVPPPRPRRK
PLESIIRSLEKSVKLRPIFIEWLLRRYRAGDEYVEAAYENYRLDGDEEEL
IDSLRRLLKVRVEGMKMRQKRQQQQGGSDGGVPEEVTSAIVKAVESGTLT
EDQGKMLENLYVGGHEVVRSAWEIYRREKDGRQLVERWKRIARIVAAAEG
KSSDRRRVGRGGERGGRGGGGRAGADAKRKEANEGARLSARQAIIKQSLE
LLVARRKVQVPGIRLLTHLFESGDTLLKETLDIFLQDQDVEGLLGRLLRI
LEEGDVSSAPPACVTSVSSPFISSNQSFSTPPPAAIPRTHQIPAMLSPLT
VSEADTIKKKEGMKKEMEEEEEEEVDEMRSFVSDKANKSFAPSLALNDSL
LTQDNDP*
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Synonyms
Publications