NO08G01060, NO08G01060 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01060 vs. NCBI_GenBank
Match: EWM26646.1 (Armadillo-like helical [Nannochloropsis gaditana]) HSP 1 Score: 814.3 bits (2102), Expect = 2.800e-232 Identity = 419/615 (68.13%), Postives = 487/615 (79.19%), Query Frame = 0 Query: 69 HATYETIGSRRTIGHLAVAPFLIGTLCWSTYFYHQRANQDFVMAAGVHSEEAGGTKTQVMGLFSLFKYLEISTDGPRLDLSPLAQMIDWRGLVDLAPTQAFLGVVYYCWSSLLHGMDNTVALFPSMDIKPKLVRLGVLEKLEEGLGSENPTVRLCAAYVVNRMVRNTHVARMVAARPVIVQGIVQMLEEEVVVEGGRFVGFVHSESSASAEVFVTLLETVNNVVEAVVDKDIVLLIGASGGHHPLVGSRPDAVLQLLPSSLISKASLMLRHLELCDEHVGNASGLFNDPHMSIYSKFFPHRVDDQVRRRMREVEAEVTRFLGAISKEGGACERLLLQREVLAGLVPLARTEGRNASAFVHAVEGVHNILDLYEMVMEREGXXXXXXXXXXXXXXHSIGSSGNDGG-----------------TRARQXXXXXXXXXXXXXXXXXLPETSLLLPSHLTSRALVDAHATIACRDEGTLGGPFARLHSVYAMRCYISSMACLVAGGLYGILRSAAAFPLVKPMYAYSVNGMGAVLLNAGYGTYGMRNWLKQHTYIEDDETNALWTWGTAVVDVAVVTTIVRRHPYALLPMCAVNYLGFNSSPGTGMKRLDGMDSFFSL 667 H TYE+ G+ RT+GHL VAPFL+GTLCWST+FY + AN D V AAG +++EAGGT++Q++GLFS+FKYLEISTDGPRLDLSPLA ++DWRGL+ LAPTQ+ LG+VY+ WSSLLHG+DNTVA FPS+DIKPKLVRLGVL KLEEGL SE+PTVRLCAAYVVNR+VRN HVARMVAARPVIVQG+V MLEEE++VEGGRF GF HS +ASAEVFVTLLET+NN+VE VV+K+ V+LIG SGGH P++G+RPD VL L+ SL+ KASLMLR L+LCDEHVGNA+GLF D MSIY+KFFP RVDDQVRRRMREVEAEV RFLG ISK+ ACE LLL+R+VLAGLVPLAR EGRNASAFVHAVE VHN+LD Y V E+ HS+ S+G + G A + +SLLLPSHLT A+ DA ++A R+EGTLG PFARL SVYAMRCYISSMACLV GGLYG++RSAA+FPLV P+ AYSVNG+GAV+LNAGYGTYG+RNWLKQ+TY+E+ E+ A WT AVVDV VVT IVRRHPYALLPM AVNY GFNSSPGTGMKRLDGMD+FF+L Sbjct: 69 HGTYESSGT-RTVGHLMVAPFLLGTLCWSTFFYQKHANGDLVAAAG-YNKEAGGTRSQILGLFSMFKYLEISTDGPRLDLSPLAALVDWRGLMALAPTQSTLGLVYFVWSSLLHGVDNTVAFFPSLDIKPKLVRLGVLSKLEEGLQSEDPTVRLCAAYVVNRLVRNAHVARMVAARPVIVQGLVDMLEEEMLVEGGRFQGFGHSAGNASAEVFVTLLETLNNLVEGVVNKEAVILIGVSGGHDPVLGARPDDVLPLITPSLVHKASLMLRLLDLCDEHVGNAAGLFEDHRMSIYAKFFPGRVDDQVRRRMREVEAEVARFLGGISKDAKACETLLLERDVLAGLVPLARAEGRNASAFVHAVEAVHNVLDRYWTVKEQ-----------GVKERHSLPSAGVERGGLSDESAEESAVKKCATPWATRREASAVDRCLGQGTPSFFSSSSLLLPSHLTDCAIADAVESVAGREEGTLGRPFARLRSVYAMRCYISSMACLVVGGLYGVMRSAASFPLVPPVIAYSVNGIGAVMLNAGYGTYGLRNWLKQNTYVEESESFAAWTSAQAVVDVGVVTAIVRRHPYALLPMVAVNYFGFNSSPGTGMKRLDGMDAFFTL 670 The following BLAST results are available for this feature:
BLAST of NO08G01060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 1
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01060 ID=NO08G01060|Name=NO08G01060|organism=Nannochloropsis oceanica|type=gene|length=3297bpback to top protein sequence of NO08G01060.1 >NO08G01060.1-protein ID=NO08G01060.1-protein|Name=NO08G01060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=668bpback to top Synonyms
Publications
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