NO08G00910, NO08G00910 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G00910 vs. NCBI_GenBank
Match: EWM26570.1 (hypothetical protein Naga_100421g2 [Nannochloropsis gaditana]) HSP 1 Score: 245.0 bits (624), Expect = 7.700e-61 Identity = 125/180 (69.44%), Postives = 142/180 (78.89%), Query Frame = 0
Query: 9 MDVDGEYGCKMDEHSGPRLGAAPVRQQHPTQSAPPPLHSPLSATSPARLPLPPLSLKPLSRSISNPIITASK---RTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
M+VD Y ++E P++ S PP HSPLSA SP R PLPPL+LKPL+RS+SNP+ITAS R LVPR PLRKGKWTPEEE+YAHYIIDNFNKGLISLTRGTTLRSYLS+RLNCDPMRVTKKFSGTSCIGKS+FCPCE TPDNL+ +K VS RL ELEAAF++K+D
Sbjct: 1 MNVDRGYTPTVEESVLPKMIKPIDASDSGQPSLSPPHHSPLSAASPTRFPLPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVD 180 HSP 2 Score: 60.8 bits (146), Expect = 2.100e-5 Identity = 38/80 (47.50%), Postives = 43/80 (53.75%), Query Frame = 0
Query: 466 RLGHRHGQSQLDGIGKRRRDPLKFSPSPAGAAATSP----GEIREAGRETMPAVTDDHAAGDLLVNFFASVHRNHGTDSD 542
RLG R GQ G R D + A P E GR +P +TDDHAAGDLLVNFFASVHRNHG D++
Sbjct: 358 RLGEREGQGGRGKGGNRGAD------TRADRGRNYPEFGWSNDGEGGRRPIPCLTDDHAAGDLLVNFFASVHRNHGGDAE 431
BLAST of NO08G00910 vs. NCBI_GenBank
Match: CBN74989.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.1 bits (331), Expect = 7.300e-27 Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 0
Query: 46 HSPLSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLV------PRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
HS + + PL LS + I+T S +T ++ PRAP+RKGKWTPEEEVY II++FNKGL+ L GTTLRSYLS++LNCDPMR+TKKF+G SCIGK VF P E TP+NL T L E+ F +++
Sbjct: 203 HSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDISQLDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLE 348
BLAST of NO08G00910 vs. NCBI_GenBank
Match: POM60778.1 (hypothetical protein PHPALM_30338 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 117.1 bits (292), Expect = 2.400e-22 Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 0
Query: 48 PLSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
PLS TS + L P K + P + +S+ T R LRKGKWT EE YA + + F +GL+ L RGT LR YLS +LNC+PMR+TKKF+G CIGK VF PC PTPD+ L L+ LEAAF
Sbjct: 126 PLSPTSDSLLDDPKQRKKITPKRARTPKL-SSRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPDSRVRIMQAQLELVTLEAAF 257
BLAST of NO08G00910 vs. NCBI_GenBank
Match: GAX97583.1 (Hypothetical protein PINS_005457 [Pythium insidiosum]) HSP 1 Score: 115.5 bits (288), Expect = 7.100e-22 Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 0
Query: 68 SRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
SR++ NP ++ T R LRKGKWT EEE YA + F +GL+ + RGT LR YLS +LNC+PMR+TKKF+G CIGK VF PC PTP+ L L+ LEAAF
Sbjct: 1257 SRAVKNP----NRSTKSKARPGLRKGKWTEEEERYAAQLTMYFKEGLLPIARGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPEAKVRRMQAQLELVALEAAF 1365
BLAST of NO08G00910 vs. NCBI_GenBank
Match: XP_002898073.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY63486.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 114.8 bits (286), Expect = 1.200e-21 Identity = 72/174 (41.38%), Postives = 90/174 (51.72%), Query Frame = 0
Query: 37 PTQSAPPPLHSPLSATSPARLPLPPLS----------------LKPLSRSISNPIITASKRTPLVPRAP--------------LRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
P+ SA PPL+S L+ P R PLP S L P ++ N + K TP R P LRKGKWT EE YA + + F +GL+ + RGT LR YLS +LNC+PMR+TKKF+G CIGK V+ PC PTP + L L+ LEAAF
Sbjct: 113 PSASANPPLYSTLN--DPEREPLPQHSLLYPQDRFATKTEEQQLSPTGENMLNGLSQTKKITPKRTRQPKLSNRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVYRPCSPTPGSRVRIMQAQLELVALEAAF 284
BLAST of NO08G00910 vs. NCBI_GenBank
Match: XP_009525453.1 (hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae] >EGZ22736.1 hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae]) HSP 1 Score: 113.6 bits (283), Expect = 2.700e-21 Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0
Query: 78 ASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
+++ T R LRKGKWT EE YA + + F +GL+ L RGT LR YLS +LNC+PMR+TKKF+G CIGK VF PC PTP++ L L+ LEAAF
Sbjct: 177 SNRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAF 279
BLAST of NO08G00910 vs. NCBI_GenBank
Match: OWZ04650.1 (hypothetical protein PHMEG_00023412, partial [Phytophthora megakarya]) HSP 1 Score: 112.8 bits (281), Expect = 4.600e-21 Identity = 63/133 (47.37%), Postives = 79/133 (59.40%), Query Frame = 0
Query: 48 PLSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
P+S TS L P K + P + +S+ T R LRKGKWT EE YA + + F +GL+ L RGT LR YLS +LNC+PMR+TKKF+G CIGK VF PC PTP++ L L+ LEAAF
Sbjct: 124 PVSPTSDNVLDDPKNPKKITPKRTRTPKL-SSRSTKSKARPGLRKGKWTEEESRYASQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVKIMQAQLELVTLEAAF 255
BLAST of NO08G00910 vs. NCBI_GenBank
Match: EWM28900.1 (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 112.1 bits (279), Expect = 7.800e-21 Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0
Query: 91 RKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
R+GKWTPEEEVY + + + F++GL+ L GTTLRSYL+D+LNCDPMR+TKKFSG IGK +F PC P P L M + + + L LEA +R +++
Sbjct: 156 RRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMP-PQPLKMAEAM-VELDRLEAIWRRRLE 248
BLAST of NO08G00910 vs. NCBI_GenBank
Match: EWM28901.1 (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana]) HSP 1 Score: 112.1 bits (279), Expect = 7.800e-21 Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0
Query: 91 RKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
R+GKWTPEEEVY + + + F++GL+ L GTTLRSYL+D+LNCDPMR+TKKFSG IGK +F PC P P L M + + + L LEA +R +++
Sbjct: 171 RRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMP-PQPLKMAEAM-VELDRLEAIWRRRLE 263
BLAST of NO08G00910 vs. NCBI_GenBank
Match: KUF80595.1 (hypothetical protein AM587_10014009 [Phytophthora nicotianae] >KUF97118.1 hypothetical protein AM588_10009276 [Phytophthora nicotianae]) HSP 1 Score: 110.9 bits (276), Expect = 1.700e-20 Identity = 60/132 (45.45%), Postives = 79/132 (59.85%), Query Frame = 0
Query: 49 LSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
LS T+ + L P K + P + +++ T R LRKGKWT EE YA + + F +GL+ + RGT LR YLS +LNC+PMR+TKKF+G CIGK VF PC PTP++ L L+ LEAAF
Sbjct: 17 LSPTTDSMLEDPSQPKKITPKRTRTPKL-SNRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAF 147 The following BLAST results are available for this feature:
BLAST of NO08G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00910 ID=NO08G00910|Name=NO08G00910|organism=Nannochloropsis oceanica|type=gene|length=2564bpback to top protein sequence of NO08G00910.1 >NO08G00910.1-protein ID=NO08G00910.1-protein|Name=NO08G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=766bpback to top Synonyms
Publications
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