NO08G00910, NO08G00910 (gene) Nannochloropsis oceanica

Overview
NameNO08G00910
Unique NameNO08G00910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2564
Alignment locationchr8:292309..294872 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:292309..294872 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO08G00910 vs. NCBI_GenBank
Match: EWM26570.1 (hypothetical protein Naga_100421g2 [Nannochloropsis gaditana])

HSP 1 Score: 245.0 bits (624), Expect = 7.700e-61
Identity = 125/180 (69.44%), Postives = 142/180 (78.89%), Query Frame = 0
Query:    9 MDVDGEYGCKMDEHSGPRLGAAPVRQQHPTQSAPPPLHSPLSATSPARLPLPPLSLKPLSRSISNPIITASK---RTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
            M+VD  Y   ++E   P++            S  PP HSPLSA SP R PLPPL+LKPL+RS+SNP+ITAS    R  LVPR PLRKGKWTPEEE+YAHYIIDNFNKGLISLTRGTTLRSYLS+RLNCDPMRVTKKFSGTSCIGKS+FCPCE TPDNL+ +K VS RL ELEAAF++K+D
Sbjct:    1 MNVDRGYTPTVEESVLPKMIKPIDASDSGQPSLSPPHHSPLSAASPTRFPLPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVD 180          

HSP 2 Score: 60.8 bits (146), Expect = 2.100e-5
Identity = 38/80 (47.50%), Postives = 43/80 (53.75%), Query Frame = 0
Query:  466 RLGHRHGQSQLDGIGKRRRDPLKFSPSPAGAAATSP----GEIREAGRETMPAVTDDHAAGDLLVNFFASVHRNHGTDSD 542
            RLG R GQ      G R  D      + A      P        E GR  +P +TDDHAAGDLLVNFFASVHRNHG D++
Sbjct:  358 RLGEREGQGGRGKGGNRGAD------TRADRGRNYPEFGWSNDGEGGRRPIPCLTDDHAAGDLLVNFFASVHRNHGGDAE 431          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: CBN74989.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 132.1 bits (331), Expect = 7.300e-27
Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 0
Query:   46 HSPLSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLV------PRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
            HS +   +    PL  LS      +    I+T S +T ++      PRAP+RKGKWTPEEEVY   II++FNKGL+ L  GTTLRSYLS++LNCDPMR+TKKF+G SCIGK VF P E TP+NL  T      L E+   F  +++
Sbjct:  203 HSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDISQLDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLE 348          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: POM60778.1 (hypothetical protein PHPALM_30338 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 117.1 bits (292), Expect = 2.400e-22
Identity = 65/133 (48.87%), Postives = 80/133 (60.15%), Query Frame = 0
Query:   48 PLSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
            PLS TS + L  P    K   +    P + +S+ T    R  LRKGKWT EE  YA  + + F +GL+ L RGT LR YLS +LNC+PMR+TKKF+G  CIGK VF PC PTPD+        L L+ LEAAF
Sbjct:  126 PLSPTSDSLLDDPKQRKKITPKRARTPKL-SSRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPDSRVRIMQAQLELVTLEAAF 257          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: GAX97583.1 (Hypothetical protein PINS_005457 [Pythium insidiosum])

HSP 1 Score: 115.5 bits (288), Expect = 7.100e-22
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 0
Query:   68 SRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
            SR++ NP    ++ T    R  LRKGKWT EEE YA  +   F +GL+ + RGT LR YLS +LNC+PMR+TKKF+G  CIGK VF PC PTP+         L L+ LEAAF
Sbjct: 1257 SRAVKNP----NRSTKSKARPGLRKGKWTEEEERYAAQLTMYFKEGLLPIARGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPEAKVRRMQAQLELVALEAAF 1365          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: XP_002898073.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY63486.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 114.8 bits (286), Expect = 1.200e-21
Identity = 72/174 (41.38%), Postives = 90/174 (51.72%), Query Frame = 0
Query:   37 PTQSAPPPLHSPLSATSPARLPLPPLS----------------LKPLSRSISNPIITASKRTPLVPRAP--------------LRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
            P+ SA PPL+S L+   P R PLP  S                L P   ++ N +    K TP   R P              LRKGKWT EE  YA  + + F +GL+ + RGT LR YLS +LNC+PMR+TKKF+G  CIGK V+ PC PTP +        L L+ LEAAF
Sbjct:  113 PSASANPPLYSTLN--DPEREPLPQHSLLYPQDRFATKTEEQQLSPTGENMLNGLSQTKKITPKRTRQPKLSNRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVYRPCSPTPGSRVRIMQAQLELVALEAAF 284          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: XP_009525453.1 (hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae] >EGZ22736.1 hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae])

HSP 1 Score: 113.6 bits (283), Expect = 2.700e-21
Identity = 54/103 (52.43%), Postives = 68/103 (66.02%), Query Frame = 0
Query:   78 ASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
            +++ T    R  LRKGKWT EE  YA  + + F +GL+ L RGT LR YLS +LNC+PMR+TKKF+G  CIGK VF PC PTP++        L L+ LEAAF
Sbjct:  177 SNRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAF 279          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: OWZ04650.1 (hypothetical protein PHMEG_00023412, partial [Phytophthora megakarya])

HSP 1 Score: 112.8 bits (281), Expect = 4.600e-21
Identity = 63/133 (47.37%), Postives = 79/133 (59.40%), Query Frame = 0
Query:   48 PLSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
            P+S TS   L  P    K   +    P + +S+ T    R  LRKGKWT EE  YA  + + F +GL+ L RGT LR YLS +LNC+PMR+TKKF+G  CIGK VF PC PTP++        L L+ LEAAF
Sbjct:  124 PVSPTSDNVLDDPKNPKKITPKRTRTPKL-SSRSTKSKARPGLRKGKWTEEESRYASQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVKIMQAQLELVTLEAAF 255          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: EWM28900.1 (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana])

HSP 1 Score: 112.1 bits (279), Expect = 7.800e-21
Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   91 RKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
            R+GKWTPEEEVY + + + F++GL+ L  GTTLRSYL+D+LNCDPMR+TKKFSG   IGK +F PC P P  L M + + + L  LEA +R +++
Sbjct:  156 RRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMP-PQPLKMAEAM-VELDRLEAIWRRRLE 248          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: EWM28901.1 (hypothetical protein Naga_100822g1 [Nannochloropsis gaditana])

HSP 1 Score: 112.1 bits (279), Expect = 7.800e-21
Identity = 52/95 (54.74%), Postives = 70/95 (73.68%), Query Frame = 0
Query:   91 RKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKID 186
            R+GKWTPEEEVY + + + F++GL+ L  GTTLRSYL+D+LNCDPMR+TKKFSG   IGK +F PC P P  L M + + + L  LEA +R +++
Sbjct:  171 RRGKWTPEEEVYVNRVTEAFHQGLLPLAAGTTLRSYLADKLNCDPMRITKKFSGVGSIGKCIFHPCMP-PQPLKMAEAM-VELDRLEAIWRRRLE 263          
BLAST of NO08G00910 vs. NCBI_GenBank
Match: KUF80595.1 (hypothetical protein AM587_10014009 [Phytophthora nicotianae] >KUF97118.1 hypothetical protein AM588_10009276 [Phytophthora nicotianae])

HSP 1 Score: 110.9 bits (276), Expect = 1.700e-20
Identity = 60/132 (45.45%), Postives = 79/132 (59.85%), Query Frame = 0
Query:   49 LSATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEEVYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGKSVFCPCEPTPDNLDMTKVVSLRLLELEAAF 181
            LS T+ + L  P    K   +    P + +++ T    R  LRKGKWT EE  YA  + + F +GL+ + RGT LR YLS +LNC+PMR+TKKF+G  CIGK VF PC PTP++        L L+ LEAAF
Sbjct:   17 LSPTTDSMLEDPSQPKKITPKRTRTPKL-SNRSTKSKARPGLRKGKWTEEESRYAAQLTNYFKEGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAF 147          
The following BLAST results are available for this feature:
BLAST of NO08G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26570.17.700e-6169.44hypothetical protein Naga_100421g2 [Nannochloropsi... [more]
CBN74989.17.300e-2749.32conserved unknown protein [Ectocarpus siliculosus][more]
POM60778.12.400e-2248.87hypothetical protein PHPALM_30338 [Phytophthora pa... [more]
GAX97583.17.100e-2251.33Hypothetical protein PINS_005457 [Pythium insidios... [more]
XP_002898073.11.200e-2141.38conserved hypothetical protein [Phytophthora infes... [more]
XP_009525453.12.700e-2152.43hypothetical protein PHYSODRAFT_299882 [Phytophtho... [more]
OWZ04650.14.600e-2147.37hypothetical protein PHMEG_00023412, partial [Phyt... [more]
EWM28900.17.800e-2154.74hypothetical protein Naga_100822g1 [Nannochloropsi... [more]
EWM28901.17.800e-2154.74hypothetical protein Naga_100822g1 [Nannochloropsi... [more]
KUF80595.11.700e-2045.45hypothetical protein AM587_10014009 [Phytophthora ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008966NSK008966Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00910.1NO08G00910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669399gene_3419Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100421g2gene3957Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00910.1NO08G00910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00910 ID=NO08G00910|Name=NO08G00910|organism=Nannochloropsis oceanica|type=gene|length=2564bp
ATGCCACTTTCAAGGCCTGGTGACATGGACGTCGATGGCGAATACGGCTG
CAAGATGGATGAGCACTCCGGTCCCCGCCTCGGTGCCGCTCCTGTCCGTC
AGCAACACCCTACCCAATCGGCCCCTCCACCACTCCACTCTCCCTTGTCG
GCGACCTCCCCCGCACGACTTCCCCTTCCACCTCTTTCTCTCAAGCCCTT
GTCACGTTCTATCTCCAATCCTATCATCACCGCCAGCAAGCGCACACCCC
TCGTACCACGGGCCCCGCTGCGCAAGGGCAAGTGGACGCCGGAGGAAGAA
GTATACGCGCATTACATCATCGACAATTTTAACAAGGGCTTGATAAGCTT
GACGCGAGgtacgccggatatgccaggtccatggaagggatgcgcgtgga
tgtattgtcattccctcccttattcctattttatttacgcctgtcactga
tattttatgcgttgattatctccgttttcctccaccctcctctcctaaga
tctcacccttttaagtcgtatgtccgtctctgtccaattaaagcacttct
attgccaatcagaaaacgctgcacctaaacctccattccctgcctccctc
cctcccttggtctccctctcctagGCACTACTCTCCGCTCCTACCTTTCC
GACCGGCTCAATTGTGATCCTATGCGCGTCACCAAAAAGTTCTCTGGTAC
CTCCTGCATCGGAAAAAGCGTCTTCTGTCCTTGTGAGCCAACTCCTGATA
ACCTTGACATGACCAAGGTGGTCTCCCTCCGTCTCCTCGAGCTCGAGGCC
GCCTTTCGCGCCAAAATCGACTTCAACGCCCCGATCACCACCCCTGCCTC
CCTCCCGCCCTCTGCCTCCCTCCCGCCCTCCCTCCATTCGATACATCAGC
ACCATAACTTGGCTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGGGACACCCACATCACTTGCATCCTCCCCATGCGCACTGGCTACCTCA
TCCCCCCTCCCCTCCTCTTCCCCCACCTCCTCCTGCTGCTGCTGCTGCGG
CTGCTGCCGCCGCTGGTGCTGCCCCTTACTCTCACGACAAGGACGACACC
AAAAGCAGCAATGGCCATCTACACCTCAACGGCAAGGGAAGCAGCAGCGA
CAACAGCTCCAATCCCAATAGCAGCAGCCGAGCACAGTCTCCTTCCACTG
ATGTTCTTCACGCCTCGAGCATTACCACCACCACCACCCCCACCACCACC
ACCACCAACAGCAGCAGCAGCTATAACAGCAGAAGCATACCTCCCCCTGC
CGTCCACCACCACCACCACCTCGGCCCTTCTGCTCCTGGACTCCCTTACC
CCCCTCCACCTCCTTCCTCTACTCACCCCCTGCAATACCATGAGCAGCAC
CTGCGTCACCTGCCTCACTCCCACCATCCTCATTCCCTTGCATCCTTCTC
CATGCCCTCACGTCATTCTGCCCCAGACCTGGCTCTTGCTGACTCCTCCT
CTGAAGATGAAAATGATCAATACTTCCACCCCACTTTCTCCCCCACCCTC
CTTCAATCTTCCTCTCCTCGCTCTGGGAGAGGGAGCGCCAGAGGAGGAGG
AGGGGGAGAAAGCGAGGGCGGGAGGGAGGGAGGAGAACGTCGACGCTACA
CGAGTGGGAGACGACTGGGGCATCGCCACGGACAATCTCAGTTGGACGGG
ATTGGAAAGAGAAGAAGAGACCCCCTCAAGTTTTCTCCATCTCCTGCTGG
TGCGGCTGCTACTTCTCCAGGAGAAATCAGGGAGGCAGGGAGGGAGACCA
TGCCGGCTGTGACGGACGATCACGCCGCGGGGGATCTGCTTGTGAATTTC
TTTGCGTCGGTTCACAGAAATCACGGCACAGATTCCGACCAGGCAGAGGA
GGACGAGGATGAGGGGCAGGAGAAGATGGAGGCTATGGAGCACCAGGGGC
AACAGGAGTGCCGTCCCTCCTCCTCGTCCCCCCCCTCCTTCCCCACGTTA
GGTGCTGCAGCATCCGCAGCAGCGGGAGCAGCAGCAGGAGCTGTAGCAGC
AGGAGCAGCAGCAGCAGCGGCAGCAGAAGCAGCAGCAGCAGCAGCTGATG
ATGAAGCCTCCACGACGTCGTCTGGCGGCTCGGATCCTGGCACTGCTGCT
GCTGCTGCTGCTGCTGTCCCTACCCCCTCCTCCCCCTCGTCCTCCCTCAC
TTCCTCATCCTTGTCCATGTCTCCTTCCTCTACAGCAGCAGGTGTGACTG
GTTCTGTTGAAGGCTTGCTGCCGCGTGCTGTTGATGTCGTCACTGCCGCC
GCTGCCGCTCCTCCGCCGCCTGCTGCTGTTGCTGCTGCCGCCGCCCAGGC
AGCCAGTGGTAGCATCACGAAGAAGGAAGGGATGAAAACGTGGGGGAAAG
GAGGGGAGAAGGAAGAAGCGGGAGGAGAGGGAGGGGAGAACTGCTGGTTA
GTCTTCAAGAAAGAGGAGGGAGGAAAAGAAGGCGAGGAAGGAGGGGTGGT
AGGCCCGGGGGAAGGGCCCGCTGATGCCGTAAAACGACAGAAGATATTTG
GTTCAGGTTGCTAG
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protein sequence of NO08G00910.1

>NO08G00910.1-protein ID=NO08G00910.1-protein|Name=NO08G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=766bp
MPLSRPGDMDVDGEYGCKMDEHSGPRLGAAPVRQQHPTQSAPPPLHSPLS
ATSPARLPLPPLSLKPLSRSISNPIITASKRTPLVPRAPLRKGKWTPEEE
VYAHYIIDNFNKGLISLTRGTTLRSYLSDRLNCDPMRVTKKFSGTSCIGK
SVFCPCEPTPDNLDMTKVVSLRLLELEAAFRAKIDFNAPITTPASLPPSA
SLPPSLHSIHQHHNLAQQQQQQQQQQQQQGHPHHLHPPHAHWLPHPPSPP
LPPPPPAAAAAAAAAAGAAPYSHDKDDTKSSNGHLHLNGKGSSSDNSSNP
NSSSRAQSPSTDVLHASSITTTTTPTTTTTNSSSSYNSRSIPPPAVHHHH
HLGPSAPGLPYPPPPPSSTHPLQYHEQHLRHLPHSHHPHSLASFSMPSRH
SAPDLALADSSSEDENDQYFHPTFSPTLLQSSSPRSGRGSARGGGGGESE
GGREGGERRRYTSGRRLGHRHGQSQLDGIGKRRRDPLKFSPSPAGAAATS
PGEIREAGRETMPAVTDDHAAGDLLVNFFASVHRNHGTDSDQAEEDEDEG
QEKMEAMEHQGQQECRPSSSSPPSFPTLGAAASAAAGAAAGAVAAGAAAA
AAAEAAAAAADDEASTTSSGGSDPGTAAAAAAAVPTPSSPSSSLTSSSLS
MSPSSTAAGVTGSVEGLLPRAVDVVTAAAAAPPPPAAVAAAAAQAASGSI
TKKEGMKTWGKGGEKEEAGGEGGENCWLVFKKEEGGKEGEEGGVVGPGEG
PADAVKRQKIFGSGC*
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Synonyms
Publications