NO08G00790, NO08G00790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00790 vs. NCBI_GenBank
Match: EWM26549.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 101.7 bits (252), Expect = 1.800e-17 Identity = 106/330 (32.12%), Postives = 134/330 (40.61%), Query Frame = 0 Query: 1 MIPAFPTAAWPPGGPRPQQDPPP---PATRPAFQAADLQDHHPDASASSLELMPCGIT-PVVQKLSATTLNSNGNGE------------IVPASAPSAASGNVTRANGLGTAGXXXXXXXAVSACVPGPVKTLNVLLG-GADACEAEAETKECSSTYSSYCNPGSISSTKVSSDFHHHYSHH--DQPSYSI-----------------ARNVSLPMALAGS--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRQHVREGRWSKEEHALFLEGYEKHGRSWKDIAGLLRTRSSEQVRTHAQKHFQKKAAQTGGAFEKHQRT 293 M+ A P A+WPP G RPQQDPPP P+T + Q + M C T P+ ++LS TTLNSN + +VPA P + +R N G A G V L+ G + + + K +T GSI+ + D Y HH D P S N + P+ RQ REGRW+KEEH +FL GYE+ GRSWKDIAGLL+TR+SEQVRTHAQK FQKK + G EKHQR+ Sbjct: 1 MLSASPAASWPPDGARPQQDPPPSCHPSTLTGSRDVPSQ-------PLTFSTMRCPDTEPMAEQLSVTTLNSNDSRHRVALPGAFEGWGLVPA-LPVDKPASTSRHNTYNPCG------NGPHAAHEGRVPRLSERPGCDEEEIDTKGFVKRDENTARGQYVRGSINCANLPPDLQRTYGHHFRDGPPESAFLPCAASLCAPADELRGGSNPAFPVGYPAPSLGLRAPSLLGSGQPHGKEPKGKREEWEDVGYPPLKPPQAKRQTAREGRWTKEEHTIFLHGYERFGRSWKDIAGLLQTRNSEQVRTHAQKFFQKK--EHPGGMEKHQRS 314
BLAST of NO08G00790 vs. NCBI_GenBank
Match: OQR98245.1 (valyl-tRNA synthetase [Thraustotheca clavata]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-11 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEGQQQAQP 1320 G+ GRWT EEH FL+GL LYG+ WK + A ++TRTS QIR+HAQKYF K+ K ++Q G++ P Sbjct: 1109 GMNGGRWTDEEHENFLQGLNLYGREWKRVAAKIKTRTSAQIRSHAQKYFAKIAKDAEVQSSGERHENP 1176
BLAST of NO08G00790 vs. NCBI_GenBank
Match: KRX03542.1 (Homeodomain protein [Pseudocohnilembus persalinus]) HSP 1 Score: 81.6 bits (200), Expect = 2.000e-11 Identity = 35/66 (53.03%), Postives = 52/66 (78.79%), Query Frame = 0 Query: 1253 VKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEGQQQAQ 1319 V GRWT EEH+ FL+GLQ++GK+WK I+ +++TRT QIR+HAQKY++K+GK + Q+E + A+ Sbjct: 6 VTNGRWTDEEHSLFLKGLQMHGKNWKLIEKMIQTRTGSQIRSHAQKYYLKLGKPSKKQKEKKSSAK 71
BLAST of NO08G00790 vs. NCBI_GenBank
Match: XP_008606780.1 (hypothetical protein SDRG_02947 [Saprolegnia diclina VS20] >EQC39508.1 hypothetical protein SDRG_02947 [Saprolegnia diclina VS20]) HSP 1 Score: 80.9 bits (198), Expect = 3.300e-11 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEGQQQAQP 1320 G+ GRWT EEH +FL GL LYG+ WK + + ++TRTS QIR+HAQKYF K+ K +MQ G++ P Sbjct: 34 GMNGGRWTDEEHESFLLGLNLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAKDAEMQLSGEKVENP 101
BLAST of NO08G00790 vs. NCBI_GenBank
Match: XP_012197209.1 (hypothetical protein SPRG_03236 [Saprolegnia parasitica CBS 223.65] >KDO32019.1 hypothetical protein SPRG_03236 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 80.9 bits (198), Expect = 3.300e-11 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEGQQQAQP 1320 G+ GRWT EEH +FL GL LYG+ WK + + ++TRTS QIR+HAQKYF K+ K +MQ G++ P Sbjct: 35 GMNGGRWTDEEHESFLLGLNLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAKDAEMQLSGEKVENP 102
BLAST of NO08G00790 vs. NCBI_GenBank
Match: OQR92021.1 (hypothetical protein ACHHYP_04136 [Achlya hypogyna]) HSP 1 Score: 79.7 bits (195), Expect = 7.400e-11 Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEGQQQAQP 1320 G+ GRWT EEH +FL+GL LYG+ WK + + ++TRTS QIR+HAQKYF K+ K +M G++ P Sbjct: 17 GMNGGRWTDEEHESFLQGLHLYGREWKRVASKIKTRTSAQIRSHAQKYFAKLAKDAEMGLGGEKPENP 84
BLAST of NO08G00790 vs. NCBI_GenBank
Match: XP_002184266.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 79.0 bits (193), Expect = 1.300e-10 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEG 1314 G GRWT EEH FL+GL+ +GK WK+I +L+++RT QIRTHAQKYF K+ K RQ +EG Sbjct: 114 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEG 175
BLAST of NO08G00790 vs. NCBI_GenBank
Match: XP_002184267.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44445.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 79.0 bits (193), Expect = 1.300e-10 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEG 1314 G GRWT EEH FL+GL+ +GK WK+I +L+++RT QIRTHAQKYF K+ K RQ +EG Sbjct: 114 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEG 175
BLAST of NO08G00790 vs. NCBI_GenBank
Match: GAX28359.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 79.0 bits (193), Expect = 1.300e-10 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEG 1314 G GRWT EEH FL+GL+ +GK WK+I +L+++RT QIRTHAQKYF K+ K RQ +EG Sbjct: 96 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEG 157
BLAST of NO08G00790 vs. NCBI_GenBank
Match: GAX24276.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 79.0 bits (193), Expect = 1.300e-10 Identity = 36/62 (58.06%), Postives = 46/62 (74.19%), Query Frame = 0 Query: 1252 GVKEGRWTGEEHAAFLEGLQLYGKSWKEIQALVRTRTSDQIRTHAQKYFIKMGKKRQMQQEG 1314 G GRWT EEH FL+GL+ +GK WK+I +L+++RT QIRTHAQKYF K+ K RQ +EG Sbjct: 95 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEG 156 The following BLAST results are available for this feature:
BLAST of NO08G00790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00790 ID=NO08G00790|Name=NO08G00790|organism=Nannochloropsis oceanica|type=gene|length=4375bpback to top protein sequence of NO08G00790.1 >NO08G00790.1-protein ID=NO08G00790.1-protein|Name=NO08G00790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1326bpback to top Synonyms
Publications
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