NO08G00620, NO08G00620 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00620 vs. NCBI_GenBank
Match: EWM26564.1 (putative methyltransferase wbscr22 [Nannochloropsis gaditana]) HSP 1 Score: 304.7 bits (779), Expect = 2.200e-79 Identity = 159/184 (86.41%), Postives = 171/184 (92.93%), Query Frame = 0 Query: 20 MGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRKDKL 204 MGQGLPFRA CFDGA+SISALQWLCYED+KA SA ARLMRFF+SLYTVLRRGARAALQFYPENS QVLLIT+AATRVGFQGGLVVDYPNSSKAKKYYLCLSFEH+YRVP+AL +E GGRA+TSVGVTERER K RGR KKGGKRE VKSR+WVLAKKEKQR +GL+VREDSKYTARKRKD+L Sbjct: 1 MGQGLPFRAACFDGAVSISALQWLCYEDSKAQSANARLMRFFASLYTVLRRGARAALQFYPENSEQVLLITQAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHSYRVPQALGRE-EGGRALTSVGVTERERVKPRGR--KKGGKREQVKSREWVLAKKEKQRRKGLDVREDSKYTARKRKDRL 181
BLAST of NO08G00620 vs. NCBI_GenBank
Match: CBN78003.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 229.9 bits (585), Expect = 6.800e-57 Identity = 120/202 (59.41%), Postives = 145/202 (71.78%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRKDK 203 ML +A E+ETD GD+ Q DMG GLPFR FDG IS+SALQWLCY AK RL+RFFSSLY L+RG+RAALQFYP+++ Q +LI+ A R GF GGLV+DYPNS+KAKKYYLCLSFEH Y+ P A E GG A RER RG K KKG + K+R+WVLAKK++QR +G +VR+D+K+T RKRKDK Sbjct: 83 MLDVANERETDFGDLCQHDMGTGLPFRPATFDGCISVSALQWLCYAQTSEQVAKTRLLRFFSSLYATLKRGSRAALQFYPDSTEQAVLISSCAARAGFTGGLVIDYPNSTKAKKYYLCLSFEHGYKTPAAKRAEPEGGAAAAKFDGGSRERRGHRG-KPKKG---KVAKTRNWVLAKKDQQRRQGRDVRDDNKFTGRKRKDK 280
BLAST of NO08G00620 vs. NCBI_GenBank
Match: EJK63153.1 (hypothetical protein THAOC_16208 [Thalassiosira oceanica]) HSP 1 Score: 207.6 bits (527), Expect = 3.600e-50 Identity = 109/193 (56.48%), Postives = 131/193 (67.88%), Query Frame = 0 Query: 9 ETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGG--GRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKR 200 E GD+ DMG GLPFR FD ISISALQWLCY ++K K RLMRFFSSLY VLRRGARA LQFYPE S +LI+E A +VGF GG+VVDYPNS+KAKK+YL LSFE Y+ P+ LT G A T V V +R+ K + GK K++ K+++W+L KKE QR RG R+D+KYT RKR Sbjct: 136 EPSPGDLMHHDMGTGLPFRPATFDACISISALQWLCYSNSKDQIPKRRLMRFFSSLYKVLRRGARAVLQFYPETSEHAILISECAAKVGFAGGIVVDYPNSTKAKKHYLVLSFERVYKAPQGLTGAEGALLNEARTGVHVADRDPKKSKRGGGKAPRKKKGTKTKEWILHKKETQRKRGKETRKDTKYTGRKR 328
BLAST of NO08G00620 vs. NCBI_GenBank
Match: GAY00551.1 (methyltransferase WBSCR22 [Pythium insidiosum]) HSP 1 Score: 203.8 bits (517), Expect = 5.200e-49 Identity = 110/201 (54.73%), Postives = 141/201 (70.15%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCL--SFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKR 200 ML +A+E+++ GDVF DMG GLPFR G FDG ISISA+QWLCY D K H+A+ RLMRFFSSLY L+RG+RA LQ YPE Q+ I+ A R GF GGLV+DYPNS+KAKK+YLCL ++ + +P+AL G G + V V R++ +R KG RE VK++DWVLAKKE+ R +G V+ DSK+TAR+R Sbjct: 83 MLDIASERDS-SGDVFLLDMGCGLPFRPGIFDGCISISAVQWLCYSDKKEHTARRRLMRFFSSLYMCLKRGSRAVLQLYPETPEQMEEISSCAMRCGFSGGLVIDYPNSAKAKKFYLCLFAGYDGSQEIPKAL----GTGEGASEVAVQGRQKTLKR-----KGKGREPVKAKDWVLAKKERYRKQGKTVKNDSKFTARRR 273
BLAST of NO08G00620 vs. NCBI_GenBank
Match: XP_004343625.1 (methyltransferase, putative [Acanthamoeba castellanii str. Neff] >ELR20494.1 methyltransferase, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 196.8 bits (499), Expect = 6.400e-47 Identity = 110/205 (53.66%), Postives = 137/205 (66.83%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCL---SFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGG--KREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRK 201 ML +AAE+ D GDV Q DMG GLPFRAG FDGAISISALQWLC +D H + R+ +FFSSLY L RG+RA QFYP+ QV L+T AA R GF GGLVVD+PNS+KAKKY+L L S ++P+ L E +V R A++R R + GG + A KS+DW+L KKE+QR +G +VR+DSKYT RKR+ Sbjct: 87 MLDVAAERGVDDGDVCQSDMGHGLPFRAGSFDGAISISALQWLCNQDKTNHIPQRRMKKFFSSLYNCLSRGSRAVFQFYPDGPDQVQLLTAAAMRSGFTGGLVVDFPNSTKAKKYFLVLFAGSPVGQTQLPKGLDDE-----PRNTVAYDTRNEARERARARRNGGSHSKPAFKSKDWILKKKERQRKQGKDVRDDSKYTGRKRR 286
BLAST of NO08G00620 vs. NCBI_GenBank
Match: ETE73709.1 (putative methyltransferase WBSCR22 [Ophiophagus hannah]) HSP 1 Score: 196.8 bits (499), Expect = 6.400e-47 Identity = 111/200 (55.50%), Postives = 132/200 (66.00%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRK 201 ML +A E+E + GD+ DMGQG+PFR G FDG ISISA+QWLC D K HS RL RFFS+LYT L RGARA LQ YPENS Q+ LIT A + GF GG+VVDYPNS+KAKK++LCL T +P+ L E T+ ER + R KGK KSRDWVL KKE++R +G NVR D+KYT RKRK Sbjct: 87 MLDVAMEREVE-GDLMLADMGQGIPFRPGTFDGCISISAIQWLCNADKKTHSPPKRLYRFFSTLYTALARGARAVLQLYPENSQQLELITTQAMKAGFTGGMVVDYPNSTKAKKFFLCLFAGITDVLPKGLGTE--CSEEETTQAKFTNERVRLRNAKGK-----SVKKSRDWVLEKKERRRRQGRNVRADTKYTGRKRK 278
BLAST of NO08G00620 vs. NCBI_GenBank
Match: KFO87035.1 (putative methyltransferase WBSCR22, partial [Buceros rhinoceros silvestris]) HSP 1 Score: 196.1 bits (497), Expect = 1.100e-46 Identity = 107/202 (52.97%), Postives = 132/202 (65.35%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRKDK 203 ML +A E+E + GD+ D+G G+PFR G FDG ISISA+QWLC D K+HS RL RFFS+LYT L RG+RA LQ YPENS Q+ LIT A R GF GG+VVDYPNS+KAKK++LCL +P+ L EG G T ER + R KGK KSRDW+L KKE++R +G VR D+KYT RKR+ + Sbjct: 19 MLDVAVEREVE-GDLLLADVGHGIPFRPGMFDGCISISAVQWLCNADKKSHSPPKRLYRFFSTLYTALARGSRAVLQLYPENSEQLELITAQAMRAGFTGGMVVDYPNSAKAKKFFLCLFVGACGALPKGLGTEGAAGEETQQAKFT-NERTRFRNAKGK-----SVKKSRDWILEKKERRRRQGKEVRADTKYTGRKRRPR 213
BLAST of NO08G00620 vs. NCBI_GenBank
Match: XP_010130073.1 (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase, partial [Buceros rhinoceros silvestris]) HSP 1 Score: 196.1 bits (497), Expect = 1.100e-46 Identity = 107/202 (52.97%), Postives = 132/202 (65.35%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRKDK 203 ML +A E+E + GD+ D+G G+PFR G FDG ISISA+QWLC D K+HS RL RFFS+LYT L RG+RA LQ YPENS Q+ LIT A R GF GG+VVDYPNS+KAKK++LCL +P+ L EG G T ER + R KGK KSRDW+L KKE++R +G VR D+KYT RKR+ + Sbjct: 18 MLDVAVEREVE-GDLLLADVGHGIPFRPGMFDGCISISAVQWLCNADKKSHSPPKRLYRFFSTLYTALARGSRAVLQLYPENSEQLELITAQAMRAGFTGGMVVDYPNSAKAKKFFLCLFVGACGALPKGLGTEGAAGEETQQAKFT-NERTRFRNAKGK-----SVKKSRDWILEKKERRRRQGKEVRADTKYTGRKRRPR 212
BLAST of NO08G00620 vs. NCBI_GenBank
Match: XP_015668297.1 (PREDICTED: probable 18S rRNA (guanine-N(7))-methyltransferase [Protobothrops mucrosquamatus]) HSP 1 Score: 196.1 bits (497), Expect = 1.100e-46 Identity = 111/200 (55.50%), Postives = 133/200 (66.50%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEHTYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKRK 201 ML +A E+E + GD+ DMGQG+PFR G FDG ISISA+QWLC D K HS RL RFFS+LYT L RGARA LQ YPENS Q+ LIT A + GF GG+VVDYPNS+KAKKY+LCL T +P+ L E T+ +ER + R KGK KSRDWVL KKE++R +G +VR D+KYT RKRK Sbjct: 87 MLDVALEREVE-GDLMLADMGQGIPFRPGTFDGCISISAVQWLCNADKKTHSPPKRLYRFFSTLYTALARGARAVLQLYPENSQQLELITTQAMKAGFTGGMVVDYPNSTKAKKYFLCLFAGITDVLPKGLGTE--CSEEETTEAKFTKERIRFRNAKGK-----SVKKSRDWVLEKKERRRRQGKSVRTDTKYTGRKRK 278
BLAST of NO08G00620 vs. NCBI_GenBank
Match: OQR97215.1 (methyltransferase WBSCR22 [Achlya hypogyna]) HSP 1 Score: 195.7 bits (496), Expect = 1.400e-46 Identity = 108/203 (53.20%), Postives = 138/203 (67.98%), Query Frame = 0 Query: 1 MLALAAEKETDGGDVFQRDMGQGLPFRAGCFDGAISISALQWLCYEDNKAHSAKARLMRFFSSLYTVLRRGARAALQFYPENSAQVLLITEAATRVGFQGGLVVDYPNSSKAKKYYLCLSFEH----TYRVPRALTQEGGGGRAMTSVGVTERERAKQRGRKGKKGGKREAVKSRDWVLAKKEKQRSRGLNVREDSKYTARKR 200 ML +AAE+++ GDVF +DMG GLPFR G FDG ISISA+QWLCY D K H+A+ RL+RFFSSLYT L+RG RA +Q YPE Q+ I+ A + GF GGLV+D+PNS+KAKKY+LCL H +P+ALT G T+ RE+ K+ K G RE K+RDWVLAKK++ R +G V+ DSK+TAR+R Sbjct: 83 MLDIAAERDS-SGDVFLQDMGCGLPFRPGVFDGCISISAVQWLCYSDKKEHTARKRLLRFFSSLYTCLKRGGRAVIQLYPETPEQMEEISGCAMKSGFSGGLVIDFPNSAKAKKYFLCLFAGHDPTSKPTIPKALT-----GDPNTAAFEARREKNKK-----SKRGNREMPKNRDWVLAKKDRYRKQGKEVKNDSKFTARRR 274 The following BLAST results are available for this feature:
BLAST of NO08G00620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00620 ID=NO08G00620|Name=NO08G00620|organism=Nannochloropsis oceanica|type=gene|length=1833bpback to top protein sequence of NO08G00620.1 >NO08G00620.1-protein ID=NO08G00620.1-protein|Name=NO08G00620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=286bpback to top protein sequence of NO08G00620.2 >NO08G00620.2-protein ID=NO08G00620.2-protein|Name=NO08G00620.2|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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