NO08G00580, NO08G00580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_020242251.1 (proteasome subunit alpha type-2-A [Asparagus officinalis] >ONK59242.1 uncharacterized protein A4U43_C08F4440 [Asparagus officinalis]) HSP 1 Score: 349.4 bits (895), Expect = 9.700e-93 Identity = 168/232 (72.41%), Postives = 203/232 (87.50%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NG+VIATEKKLPS+L+DE+ VQK++L+ + G V+SG+GPD RVLVRKSRK+A+ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQLFQVDPSG+YF WKA+A+GKN NAK FLEKRY ++MELDDAVHTA+LTL+EGFEG+++ NIEIGIIGADRKF +LTPA++ DYL E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGIVIATEKKLPSILVDETSVQKIQLMTANIGVVYSGMGPDSRVLVRKSRKQAEQYYKLYKEAIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISSKNIEIGIIGADRKFRVLTPAEIDDYLAE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: ONK80533.1 (uncharacterized protein A4U43_C01F18890 [Asparagus officinalis]) HSP 1 Score: 349.4 bits (895), Expect = 9.700e-93 Identity = 170/236 (72.03%), Postives = 203/236 (86.02%), Query Frame = 0 Query: 17 KAMSGDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 K GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++L+ G V+SG+GPD RVLVRKSR++AQ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQLFQVDPSG+YF WKA+A+GKN NAK FLEKRY ++MELDDAVHTA+LTL+EGFEG+++ NIEIGIIGADRKF +LTPA++ DYL E Sbjct: 38 KPAMGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQLMTTDIGVVYSGMGPDSRVLVRKSRRQAQQYYRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISAKNIEIGIIGADRKFRVLTPAEIDDYLAE 273
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_022715472.1 (proteasome subunit alpha type-2-A isoform X1 [Durio zibethinus] >XP_022715473.1 proteasome subunit alpha type-2-A isoform X1 [Durio zibethinus]) HSP 1 Score: 349.4 bits (895), Expect = 9.700e-93 Identity = 167/232 (71.98%), Postives = 204/232 (87.93%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++ + P+ G V+SG+GPD+RVLVRKSRK+A+ Y+ Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLLVAGYDDNGPQL+QVDPSG+YF WKA+A+GKN NAK FLEKRY ++MELDDAVHTA+LTL+EGFEG+++ NIEIGIIGAD+KF +LTPA++ DYL E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDEASVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISGKNIEIGIIGADKKFRVLTPAEIEDYLAE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_020248060.1 (proteasome subunit alpha type-2-like [Asparagus officinalis]) HSP 1 Score: 349.0 bits (894), Expect = 1.300e-92 Identity = 169/232 (72.84%), Postives = 202/232 (87.07%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++L+ G V+SG+GPD RVLVRKSR++AQ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQLFQVDPSG+YF WKA+A+GKN NAK FLEKRY ++MELDDAVHTA+LTL+EGFEG+++ NIEIGIIGADRKF +LTPA++ DYL E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQLMTTDIGVVYSGMGPDSRVLVRKSRRQAQQYYRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLFQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISAKNIEIGIIGADRKFRVLTPAEIDDYLAE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: EJK51508.1 (hypothetical protein THAOC_29315 [Thalassiosira oceanica]) HSP 1 Score: 348.6 bits (893), Expect = 1.600e-92 Identity = 172/236 (72.88%), Postives = 205/236 (86.86%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNG-PQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIG-ADRKFTILTPAQVRDYLDEAN 255 GDSAYSFSLTTFSRTGKLLQIEYAL+A G+T+LGI A +GVVIAT+KK S L++ V+KVE + +GFV++G+GPDYRVLVRK+RK AQ+Y+ +YRE +PVGQLV+ TA VMQE+TQSGGVRPFG+SLLVAG D +G P+LFQVDPSGAYFGWKATAIGK +VNAKNFLEKRY ++MEL+DAVHTALLTLREGFEGEMN HNIE+GI+ +D KF +LTP Q++DYLDEAN Sbjct: 2 GDSAYSFSLTTFSRTGKLLQIEYALNAVANGRTALGIAAKDGVVIATDKKFGSALVEGEGVKKVEQVTDGSGFVYAGVGPDYRVLVRKARKSAQAYFREYREVKPVGQLVKSTASVMQEYTQSGGVRPFGVSLLVAGMDGDGVPRLFQVDPSGAYFGWKATAIGKGYVNAKNFLEKRYQDDMELEDAVHTALLTLREGFEGEMNGHNIEVGIVSKSDGKFKLLTPEQIQDYLDEAN 237
BLAST of NO08G00580 vs. NCBI_GenBank
Match: NP_001288516.1 (proteasome subunit alpha type-2-like [Zea mays] >NP_001345504.1 proteasome subunit alpha type-2-like [Zea mays] >NP_001345505.1 uncharacterized protein LOC100192809 [Zea mays] >XP_004953204.1 proteasome subunit alpha type-2 [Setaria italica] >XP_008678852.1 proteasome subunit alpha type-2-like isoform X1 [Zea mays] >ACG33652.1 proteasome subunit alpha type 2 [Zea mays] >ACG49091.1 proteasome subunit alpha type 2 [Zea mays] >KQL30628.1 hypothetical protein SETIT_018239mg [Setaria italica] >AQK53812.1 Proteasome subunit alpha type [Zea mays] >AQK53813.1 Proteasome subunit alpha type [Zea mays] >AQK53815.1 Proteasome subunit alpha type [Zea mays] >AQK53816.1 Proteasome subunit alpha type [Zea mays] >AQK53817.1 Proteasome subunit alpha type [Zea mays] >AQK53819.1 Proteasome subunit alpha type [Zea mays] >AQK53822.1 Proteasome subunit alpha type [Zea mays] >AQK53824.1 Proteasome subunit alpha type [Zea mays] >AQK53830.1 Proteasome subunit alpha type [Zea mays] >AQK53831.1 Proteasome subunit alpha type [Zea mays] >AQK53836.1 Proteasome subunit alpha type [Zea mays] >AQK53838.1 Proteasome subunit alpha type [Zea mays] >PAN07223.1 hypothetical protein PAHAL_A02666 [Panicum hallii] >PUZ76705.1 hypothetical protein GQ55_1G312100 [Panicum hallii var. hallii]) HSP 1 Score: 348.2 bits (892), Expect = 2.200e-92 Identity = 163/232 (70.26%), Postives = 206/232 (88.79%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++ + P+ G V+SG+GPD+RVLVRKSRK+AQ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQL+QVDPSG+YF WKA+A+GKN NAK FLEKRY E+MELDDA+HTA+LTL+EG+EG+++ +NIEIGII ADR+F +L+P++++D+L+E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQALTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKEHIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISSNNIEIGIIRADREFKVLSPSEIKDFLEE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_012454310.1 (PREDICTED: proteasome subunit alpha type-2-A-like [Gossypium raimondii] >XP_016701252.1 PREDICTED: proteasome subunit alpha type-2-A-like [Gossypium hirsutum] >XP_017647029.1 PREDICTED: proteasome subunit alpha type-2-A-like [Gossypium arboreum] >KJB69898.1 hypothetical protein B456_011G048700 [Gossypium raimondii]) HSP 1 Score: 348.2 bits (892), Expect = 2.200e-92 Identity = 167/232 (71.98%), Postives = 203/232 (87.50%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++ + P+ G V+SG+GPD+RVLVRKSRK+A+ Y+ Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLLVAGYDDNGPQL+QVDPSG+YF WKA+A+GKN NAK FLEKRY ++MELDDAVHTA+LTL+EGFEG+++ NIEIGIIG DRKF +LTPA++ DYL E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQCLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISGKNIEIGIIGTDRKFRVLTPAEIDDYLAE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_020179297.1 (proteasome subunit alpha type-2-like [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 348.2 bits (892), Expect = 2.200e-92 Identity = 163/232 (70.26%), Postives = 206/232 (88.79%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++ + P+ G V+SG+GPD+RVLVRKSRK+AQ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQL+QVDPSG+YF WKA+A+GKN NAK FLEKRY E+MELDDA+HTA+LTL+EG+EG+++ +NIEIG+I ADR+F +LTP++++D+L+E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGVIRADREFKVLTPSEIKDFLEE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_006648864.1 (PREDICTED: proteasome subunit alpha type-2 [Oryza brachyantha] >XP_015625377.1 PREDICTED: proteasome subunit alpha type-2-like [Oryza sativa Japonica Group] >BAD25097.1 alpha 2 subunit of 20S proteasome [Oryza sativa Japonica Group] >BAF09430.1 Os02g0634900 [Oryza sativa Japonica Group] >BAG97642.1 unnamed protein product [Oryza sativa Japonica Group] >BAG87113.1 unnamed protein product [Oryza sativa Japonica Group] >EEC73660.1 hypothetical protein OsI_08192 [Oryza sativa Indica Group] >EEE57435.1 hypothetical protein OsJ_07639 [Oryza sativa Japonica Group] >BAS79934.1 Os02g0634900 [Oryza sativa Japonica Group]) HSP 1 Score: 348.2 bits (892), Expect = 2.200e-92 Identity = 163/232 (70.26%), Postives = 206/232 (88.79%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++ + P+ G V+SG+GPD+RVLVRKSRK+AQ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQL+QVDPSG+YF WKA+A+GKN NAK FLEKRY E+MELDDA+HTA+LTL+EG+EG+++ +NIEIG+I +DR+F +LTPA+++D+L+E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISANNIEIGVIRSDREFKVLTPAEIKDFLEE 233
BLAST of NO08G00580 vs. NCBI_GenBank
Match: XP_004984179.1 (proteasome subunit alpha type-2 [Setaria italica] >KQK90622.1 hypothetical protein SETIT_037289mg [Setaria italica]) HSP 1 Score: 347.8 bits (891), Expect = 2.800e-92 Identity = 163/232 (70.26%), Postives = 206/232 (88.79%), Query Frame = 0 Query: 21 GDSAYSFSLTTFSRTGKLLQIEYALSAAQQGKTSLGIRATNGVVIATEKKLPSVLIDESYVQKVELINPSTGFVFSGLGPDYRVLVRKSRKRAQSYYLQYREQQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWKATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNEHNIEIGIIGADRKFTILTPAQVRDYLDE 253 GDS YSFSLTTFS +GKL+QIE+AL+A G+TSLGI+A NGVVIATEKKLPS+L+DE+ VQK++ + P+ G V+SG+GPD+RVLVRKSRK+AQ YY Y+E PV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDDNGPQL+QVDPSG+YF WKA+A+GKN NAK FLEKRY E+MELDDA+HTA+LTL+EG+EG+++ +NIEIGII +DR+F +L+PA+++D+L+E Sbjct: 2 GDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQALTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGYEGQISSNNIEIGIIRSDREFRVLSPAEIKDFLEE 233 The following BLAST results are available for this feature:
BLAST of NO08G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00580 ID=NO08G00580|Name=NO08G00580|organism=Nannochloropsis oceanica|type=gene|length=2572bpback to top protein sequence of NO08G00580.1 >NO08G00580.1-protein ID=NO08G00580.1-protein|Name=NO08G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=255bpback to top Synonyms
Publications
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