NO08G00540, NO08G00540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00540 vs. NCBI_GenBank
Match: EWM26539.1 (membrane transporter [Nannochloropsis gaditana]) HSP 1 Score: 534.6 bits (1376), Expect = 3.000e-148 Identity = 318/462 (68.83%), Postives = 359/462 (77.71%), Query Frame = 0 Query: 12 LCLGAVAVLVAMAFVPETDAFLQPPLGPSPSTPFSLFPFA-KSSPSLSRRPDLRPLHQPPGHPFPTLQTRPFSHLNAVSFLSHLRIEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLSLKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 LC+ VAV+V+ +V +T AFL P+ P PF + P + S S P FP RP + L A L I+P AFKTS NAVLRLV+SC LGL AAS GLLDQ+SLSTLSRLIFAFFQPALLFTNVATTLATPSS+G+SL VLP FA+LQILFG LYGKG+A+ LRL+P SD GKELAVC AFANSGPLPLLFADAF RLHPTDPTLYPRAVAYISFYLVAWSPLFWT+G+TILG+ +QPAY+ XXXXXXXX ++ HPL +K +SPPTLGCL GA+VG TP LR++FFGP APLA+LFDALRTMGSAYLPTVLLVLAGSLA+GF++L+LKD AL RT AIC ARF LMP TA LL +G A +LIPSSD LLAF+LLLQACMPCAQNTVVILQLQ+RPAAAASMATLVSL Y+ AV+PMG LLS VLQYVGL Sbjct: 33 LCM--VAVIVSF-WVRDTGAFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFA---FPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPXXXXXXXXLP-------SRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 481
BLAST of NO08G00540 vs. NCBI_GenBank
Match: EWM26540.1 (membrane transporter [Nannochloropsis gaditana]) HSP 1 Score: 529.6 bits (1363), Expect = 9.700e-147 Identity = 310/443 (69.98%), Postives = 346/443 (78.10%), Query Frame = 0 Query: 31 AFLQPPLGPSPSTPFSLFPFA-KSSPSLSRRPDLRPLHQPPGHPFPTLQTRPFSHLNAVSFLSHLRIEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLSLKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 AFL P+ P PF + P + S S P FP RP + L A L I+P AFKTS NAVLRLV+SC LGL AAS GLLDQ+SLSTLSRLIFAFFQPALLFTNVATTLATPSS+G+SL VLP FA+LQILFG LYGKG+A+ LRL+P SD GKELAVC AFANSGPLPLLFADAF RLHPTDPTLYPRAVAYISFYLVAWSPLFWT+G+TILG+ +QPAY+ XXXXXXXX ++ HPL +K +SPPTLGCL GA+VG TP LR++FFGP APLA+LFDALRTMGSAYLPTVLLVLAGSLA+GF++L+LKD AL RT AIC ARF LMP TA LL +G A +LIPSSD LLAF+LLLQACMPCAQNTVVILQLQ+RPAAAASMATLVSL Y+ AV+PMG LLS VLQYVGL Sbjct: 22 AFLLRPIPTHPLPPFHMTPACDRLSTHRSASLPCPSRAHCPAAAFPRFGPRPRTRLFA---FPSLVIQPTAFKTSVNAVLRLVASCGLGLGAASHGLLDQASLSTLSRLIFAFFQPALLFTNVATTLATPSSYGSSLLVLPAFAVLQILFGFLYGKGMAASLRLDPASDAGKELAVCSAFANSGPLPLLFADAFFRLHPTDPTLYPRAVAYISFYLVAWSPLFWTLGSTILGSSTSQPAYAKSPXXXXXXXXLP-------SRLLHHPLLRKTLSPPTLGCLLGALVGSTPFLRAIFFGPTAPLAALFDALRTMGSAYLPTVLLVLAGSLAQGFKSLNLKDPALLSRTGAICFARFFLMPATAFLLLTLGRAFSLIPSSDPLLAFVLLLQACMPCAQNTVVILQLQQRPAAAASMATLVSLVYLAAVVPMGLLLSFVLQYVGL 454
BLAST of NO08G00540 vs. NCBI_GenBank
Match: CEL97139.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 231.9 bits (590), Expect = 4.200e-57 Identity = 154/412 (37.38%), Postives = 229/412 (55.58%), Query Frame = 0 Query: 91 LSHLRIEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAVKTQPAYSSL----------------------------XXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLA--KGFETLSLKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 LS+L I+ A + S+ AVL L++ +G+ AA + LDQ++ S LS+L+ FQPA L T++A TLA+P++ L LP F QI+ GS G+ L LR+ P S G+ L + C+F+N+GPLP+LF +A R HP DP++ + +YI+FYL +P+ W+ G +IL + T+P + XXXXXX T+++++ HP + +SP + CL G ++G +P+LR + P APL ++ AL+ +G + P LVLAGS G E+ ++ F+R + ARFV P A LL +G LI +D L F+LL+Q CMP AQ +VVILQL+ +P AA MA ++L Y L VIP+ L+S V Y G+ Sbjct: 84 LSNLHIQRGALEASSKAVLELLA--LIGIGAAKRDDLDQAARSVLSKLVRNVFQPAFLCTSIAATLASPAARVRDLLPLPFFCASQIILGSFVGEALLRILRISPKSQSGRRLKMLCSFSNAGPLPILFTNALFRDHP-DPSVMAKVNSYIAFYLTVQAPMMWSYGYSILAGMPTRPVKHHVDEDDPQWADAFADWGMSPSLEQVPPXXXXXXXXXPRSLFLQVRRTVKQLWLHPFRPRLLSPAVISCLAGIVIGTSPLLRQMLVAPGAPLTFIWGALQILGQGFRPAAALVLAGSFVTPSGGESDTVISLRNFRRVLPVAFARFVCAPTIAFTLLTIGRRLGLI-MNDPFLWFVLLMQGCMPAAQQSVVILQLENQPQAATVMAKTLTLLYSLGVIPVALLISLVRGYTGV 491
BLAST of NO08G00540 vs. NCBI_GenBank
Match: CBJ28108.1 (AEC family transporter: auxin efflux [Ectocarpus siliculosus]) HSP 1 Score: 198.7 bits (504), Expect = 3.900e-47 Identity = 138/395 (34.94%), Postives = 207/395 (52.41%), Query Frame = 0 Query: 96 IEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATIL----------GAVKTQPA---YSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLA-----KGFETLSLKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 I P K S AV L+ C LG+ AA +G+L +++ LS++++ F P+LL NVA T + S ASL +P FA +QI G LR+ P ++ G+E +C AF NSG LPL+F +A R P L R VAY SFYL+ WSP FWTIG IL G K A +++ S ++ + P ++ +SPP + C+ G ++G++P LR L APL ++ A + +AY P+ +LVLAGSLA K F +DT K A+ +AR+ L+PL LL G L+P D +L F+LL+++CMP AQN+V++LQ+ A A + Y+++++P+ LL+ + + L Sbjct: 130 INPVVVKASARAVSELLCCCVLGVVAAKKGILTPVNVAALSKIVYGIFLPSLLMVNVAKTCVSQSV--ASLLPIPAFAGIQIALGLAISGVAMRLLRINPDTEAGREAKMCMAFQNSGILPLIFLNAMFR---GSPELLSRGVAYASFYLMGWSPTFWTIGNNILTGHVHQDKGGGGKKNSAAEGDVAAVPKAKLSLFKRVANLPSKVKSIAESPAVRRVLSPPIVACMTGLVIGLSPPLRWLLMREGAPLGPMWSAFSNLTAAYTPSGVLVLAGSLANCPPGKWFS----RDTK--KTILAVGMARWFLLPLVTSGLLFGGVKYGLVP-PDPMLLFVLLIESCMPSAQNSVIMLQVAGLQDEAGRNARTLCTLYLISIVPVSILLTVFISALKL 512
BLAST of NO08G00540 vs. NCBI_GenBank
Match: EWM23919.1 (auxin efflux carrier-like protein [Nannochloropsis gaditana]) HSP 1 Score: 195.3 bits (495), Expect = 4.300e-46 Identity = 137/388 (35.31%), Postives = 208/388 (53.61%), Query Frame = 0 Query: 96 IEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHP--LCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLS---------LKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 ++P K S AV L+ +C +G + +G+L + +++ LS +++ P+LL NVA T+ T +L LP+F +QIL S + + + S +G++L V F N G P+LFA LR HP DP++ P A++YISFYL+ W+P+FWT G ++L + A S I+ HP ++ +SPP +G L G VGV+P L LF GP APL L +A++T+GSAY LLVLAGSLA T S K + + A++C+ RF L P L+++ + + D+L+ F+L LQ+CMP AQN+V+++QL R A A +A ++ Y L+ IP+ LL+ LQ L Sbjct: 93 LDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLR--TLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHP-DPSVLPLAISYISFYLLGWTPIFWTYGYSLLVPAEAPTAQS------IAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSP-LAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIHPYLQIASVCLVRFCLCPALCLSIILRAMSTGWV-KLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRQADATRLARMLLYIYSLSCIPISILLTLFLQNFSL 469
BLAST of NO08G00540 vs. NCBI_GenBank
Match: EWM23920.1 (auxin efflux carrier-like protein [Nannochloropsis gaditana]) HSP 1 Score: 195.3 bits (495), Expect = 4.300e-46 Identity = 137/388 (35.31%), Postives = 208/388 (53.61%), Query Frame = 0 Query: 96 IEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHP--LCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLS---------LKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 ++P K S AV L+ +C +G + +G+L + +++ LS +++ P+LL NVA T+ T +L LP+F +QIL S + + + S +G++L V F N G P+LFA LR HP DP++ P A++YISFYL+ W+P+FWT G ++L + A S I+ HP ++ +SPP +G L G VGV+P L LF GP APL L +A++T+GSAY LLVLAGSLA T S K + + A++C+ RF L P L+++ + + D+L+ F+L LQ+CMP AQN+V+++QL R A A +A ++ Y L+ IP+ LL+ LQ L Sbjct: 107 LDPVVVKASLTAVGELLVACGIGAWFTRRGILGREAIANLSSIVYHILLPSLLVVNVAKTVYTTPLR--TLLPLPLFGTMQILLCSCIAWVVTFLMGADVNSAKGRQLRVLQTFGNGGVAPILFATVLLRNHP-DPSVLPLAISYISFYLLGWTPIFWTYGYSLLVPAEAPTAQS------IAEKESVVTLADRIKYFIRHPPATIKRILSPPIVGSLGGLCVGVSP-LAKLFLGPRAPLGILTNAVQTIGSAYTSMGLLVLAGSLALPLPTPSPLEEVSGAESKSIHPYLQIASVCLVRFCLCPALCLSIILRAMSTGWV-KLDRLMVFVLFLQSCMPSAQNSVLMVQLSGRQADATRLARMLLYIYSLSCIPISILLTLFLQNFSL 483
BLAST of NO08G00540 vs. NCBI_GenBank
Match: GAX22255.1 (uncharacterized protein FisN_19Lh325 [Fistulifera solaris]) HSP 1 Score: 183.0 bits (463), Expect = 2.200e-42 Identity = 151/433 (34.87%), Postives = 225/433 (51.96%), Query Frame = 0 Query: 54 SPSLSRRPDLR---PLHQPPGHPFPTLQTRPFSHLNAVSFLSHLRIEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPS-SHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAV--KTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLSLKDTALFKRTA-----AICVARFVLMPLTALALLRVGTAAALI---PSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 +P+L RR + R +H P + RP LNA + P K S +A +L+S+ +G A + +LD++++ LS+L + FQP LF +VA TL + S + SL ++P+ ++QI G+ + F R + T + + +C FAN+GPLPL+F+ A L P L A A +SFYL+AWSPLFWT G IL KT+ S+ S +++V + ++ +SPP +G L G ++G P L +LFFG L + A +T+G+AYLP V+LVLAGSL + L FK+ + + RF++MPL A + R+ A L+ + + FILLLQ C P AQN VV+LQL P A MA L++ Y+ +V+PM LLS L G+ Sbjct: 20 TPTLHRRIERRSRGTIHGKKFSPARVVNARPTVTLNA-------SLNPVVVKASLSATAQLLSALGIGGMLAKRNILDKNAVKALSKLTYHVFQPTFLFVSVARTLRSVSNAQKPSLWIMPIAGVVQIAIGASLALVTSRFFRDDTTR---RHVQMCTTFANAGPLPLIFSAALLEGSP----LAGMAAAAVSFYLLAWSPLFWTFGKIILSGTSSKTENGASN----------------SPLQRVVTG--IKQFLSPPVIGSLIGMLLGSVPRLGNLFFG--GFLQPVTGACQTLGTAYLPAVMLVLAGSLVLPQDDLENSTAISFKKASPWPFVTLFATRFIVMPLLAYTMCRLLIGAGLLGGHSARSAIFHFILLLQGCTPPAQNAVVLLQLAGLP--AQGMAKLLTGLYVASVVPMTLLLSWCLSTSGV 416
BLAST of NO08G00540 vs. NCBI_GenBank
Match: GAX19737.1 (uncharacterized protein FisN_19Hh325 [Fistulifera solaris]) HSP 1 Score: 177.2 bits (448), Expect = 1.200e-40 Identity = 152/440 (34.55%), Postives = 229/440 (52.05%), Query Frame = 0 Query: 48 FPFAK--SSPSLSRRPDLR---PLHQPPGHPFPTLQTRPFSHLNAVSFLSHLRIEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPS-SHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILGAVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLSLKDTALFKRTAA------ICVARFVLMPLTALALLRVGTAAALI---PSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 F FAK ++P+L RR + R L+ + RP L+A + P K S +A +L+S+ +G A + +LD++++ LS+L + FQP LF +VA TL + S + SL ++P+ ++QI G+ + F R + T + + +C FAN+GPLPL+F+ A L P L A A +SFYL+AWSPLFWT G IL + + S ++KV S ++ +SPP +G L G ++G P L +LFFG L + A +T+G+AYLP V+LVLAGSL + S + TA+ + ++ + RF++MPL A + R+ A L+ + + FILLLQ C P AQN VV+LQL P A MA L++ Y+ +V+PM LLS L G+ Sbjct: 12 FCFAKAFTAPTLHRRIEKRSRGTLYDKKFISARVVNARPALTLSAA-------LNPVVVKASLSATAQLLSALGIGGMLAKRNILDKNAVKALSKLTYHIFQPTFLFVSVARTLRSVSDAQKPSLWIMPIAGIVQIAIGATLAMVTSRFFRDDTTR---RHVQMCTTFANAGPLPLIFSAALLEGSP----LAGMAAAAVSFYLLAWSPLFWTFGKIILSGPSSNTVNGA--------------SDSPLQKVVSG--LKQFLSPPVIGSLIGMLLGSVPRLGNLFFG--GVLQPVTGACQTLGTAYLPAVMLVLAGSLVLPQDD-SEQSTAISSKKSSPWPFVTLFATRFMVMPLLAHTMCRLLIGAGLLGEHSARSAIFHFILLLQGCTPPAQNAVVLLQLAGLP--AQGMAKLLTGLYVASVVPMTLLLSWCLSTSGV 416
BLAST of NO08G00540 vs. NCBI_GenBank
Match: CEL93843.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 166.8 bits (421), Expect = 1.600e-37 Identity = 130/380 (34.21%), Postives = 182/380 (47.89%), Query Frame = 0 Query: 98 PAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATILG----AVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFF-GPAAPLASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLSLKDTALFKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQYVGL 473 P FK S AVL L+ +G A G+LDQ+ + LS L+++ QPA LF +VA T++T + LA LPVFA+LQIL G R A+I+FYL+ WSP W++G IL V +P++S + + PP LGCL GA+ G P RS FF P+ + L DA+R +GS YLP VLL LAGSL +GF + A + A+ +ARF +MP A++R+ +LI +D +L F+LLL+ CMP AQNTVVILQ Q + A SMA ++ Y L+++P+ FL+S +L G+ Sbjct: 30 PVIFKASLGAVLNLLYVGVIGAIAGHLGVLDQAKIRCLSELVYSIAQPAFLFVSVAETISTTPGGLSLLAPLPVFAVLQILIGK------------------------------------------------------RCEAFIAFYLLGWSPFLWSLGYNILADDRDKVNNKPSWSGVLREAR----------------------DSLVRPPVLGCLAGALAGGLPWTRSFFFANPSCVVRPLVDAVRNVGSLYLPAVLLTLAGSLYRGFAQGGFRVNAF--QLPAVALARFGVMPAITFAVVRLAQRTSLI-QADPVLMFLLLLEGCMPPAQNTVVILQKQGQREEAESMAQTLAAIYALSLVPLPFLISCILDTAGV 330
BLAST of NO08G00540 vs. NCBI_GenBank
Match: XP_005761646.1 (hypothetical protein EMIHUDRAFT_452869 [Emiliania huxleyi CCMP1516] >EOD09217.1 hypothetical protein EMIHUDRAFT_452869 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 156.4 bits (394), Expect = 2.200e-34 Identity = 140/404 (34.65%), Postives = 203/404 (50.25%), Query Frame = 0 Query: 96 IEPAAFKTSTNAVLRLVSSCSLGLFAASQGLLDQSSLSTLSRLIFAFFQPALLFTNVATTLATPSSHGASLAVLPVFALLQILFGSLYGKGLASFLRLEPTSDEGKELAVCCAFANSGPLPLLFADAFLRLHPTDPTLYPRAVAYISFYLVAWSPLFWTIGATIL---------------------GAVKTQPAYSSLXXXXXXXXXXXXXXXSTIRKVFSHPLCQKAISPPTLGCLFGAIVGVTPVLRSLFFGPAAPL-------ASLFDALRTMGSAYLPTVLLVLAGSLAKGFETLSLKDTAL---FKRTAAICVARFVLMPLTALALLRVGTAAALIPSSDKLLAFILLLQACMPCAQNTVVILQLQKRPAAAASMATLVSLTYILAVIPMGFLLSAVLQ 469 + P + + +++ L++SC++G A G L S + +L+ ++F F PA+L T+VA+T+A + GA+LAV+P+ A Q+ G+ + LRL S G+ ++V +F N+G LPLLF + R + T RA + ++ +L+ WSPLFWT+G +L XXXXXXXXXXXXXXX ++A+SPP CL G +VG LF L +G AY P LLVLAGSLA E + L AI VARF +PL + ALL A L+P +D L +LLLQ+CMP AQN+V+ LQ+ P AA MA ++ Y++A +P+ +LS +LQ Sbjct: 61 VNPVILRLTRDSMAELLTSCAIGYGATKAGYLSGSQIRSLAGVVFNVFLPAMLLTSVASTVAEQQA-GAALAVMPIAAWAQVAVGASVASVSLALLRLPRRSSAGRGVSVLSSFGNAGVLPLLFVSSLFRGAAQEAT-RRRATSLVAMFLLGWSPLFWTLGYALLTGHAALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLRRALSPPIAACLAGLVVGXXXXXXXXXXXXXXXXXXXXXSWLPLFRCLEALGKAYSPAALLVLAGSLAAPTEQRRAGEGELGASASHVVAIAVARFCAVPLLSFALLHAALRAGLLP-ADPLRDLVLLLQSCMPSAQNSVLALQVDGSPERAARMARVLLAIYLIAALPVAGILSLLLQ 461 The following BLAST results are available for this feature:
BLAST of NO08G00540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00540 ID=NO08G00540|Name=NO08G00540|organism=Nannochloropsis oceanica|type=gene|length=5890bpback to top protein sequence of NO08G00540.1 >NO08G00540.1-protein ID=NO08G00540.1-protein|Name=NO08G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bpback to top Synonyms
Publications
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