NO08G00520, NO08G00520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00520 vs. NCBI_GenBank
Match: EWM26526.1 (endonuclease v [Nannochloropsis gaditana]) HSP 1 Score: 285.4 bits (729), Expect = 2.000e-73 Identity = 161/325 (49.54%), Postives = 198/325 (60.92%), Query Frame = 0 Query: 22 QTHHHQHEQHAEWSAIQARLQAAIIETDTFVWEDLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVM------------------------------------RGGGGGEREGEEVLMVDGGLGKWRKVEEGKL-----EDTYVNGST-------SCSRSLTLIGASGRTFGMAFCPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIR 299 +T + H EW A Q R + AI+E DTF L +GGLDLSF PS + E EAVAC V+LS+P LEVL+ES+LPT L PY++GFLA+RE PPM LV ELR+ P LMPQ+L+VDGNG+LHPRGCGLASHVGL TG+ ++GCAKTFLHV+GLET VR+ + R GGG R E L G V+ G+ E VN ST S R L+G +GR +G AFCP G++NP+Y+SVGTGISL A+ V+ACCK+RVPEPVRQAD+RSRAW+R Sbjct: 31 KTRPNLHAIETEWRADQERRRIAILEVDTFDRASLTRVGGLDLSFFPSSH-GHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYREGPPMAQLVEELRRTQPTLMPQVLMVDGNGILHPRGCGLASHVGLLTGIPSIGCAKTFLHVEGLETLAVRKALQEQGXXXXXXXXXXXXXXXXXXXQDLVGGPGRRVEKREAGGGHR--LEELETKGSRTPEADVDNGEAGVRQEEVCPVNASTTHFHRAQSPGRVFHLVGRAGRVWGAAFCPSGVSNPIYVSVGTGISLTSALSTVEACCKYRVPEPVRQADIRSRAWVR 352
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_021495266.1 (endonuclease V isoform X1 [Meriones unguiculatus]) HSP 1 Score: 201.8 bits (512), Expect = 3.000e-48 Identity = 118/277 (42.60%), Postives = 163/277 (58.84%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWED------LKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A ++E DT W+ L+ +GG+D+SF+ +S +A A LV+LS+P+L+V+YE L +PY+SGFLAFRE P +V LV +L++K P LMPQ+L+VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ L+G SG GMA TNPLY+SVG +SL A+R+ CC+ RVPEP+RQAD+RSR +IR RT G Sbjct: 17 WKREQARLKARVVERDTEAWQQDPTFSGLQRVGGVDVSFVKG-----DSTQACASLVVLSYPELKVVYEDSHMVGLEAPYVSGFLAFREVPFLVELVQQLQEKDPSLMPQVLLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENDALHK------------EKIMLLQAG------------GDTF-----------PLVGNSGTVLGMALKSHDRSTNPLYVSVGHRVSLEVAVRLTHCCCRFRVPEPIRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_004655772.1 (PREDICTED: endonuclease V [Jaculus jaculus]) HSP 1 Score: 200.7 bits (509), Expect = 6.600e-48 Identity = 124/278 (44.60%), Postives = 164/278 (58.99%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGV-REVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W+ QARL+A++++ DT W+ L+ +GG+D+SF+ +S A A LV+LS+P+LEVLYE L +PY+SGFLAFRE P +V LV +LR+K P LMPQ+L+VDGNGVLH +G GLA H+G+ T L +G AK L VDGLE + +E +R L++ GG DT+ L+G+SG GMA T PLY+SVG ISL A+R+ CC+ RVPEPVRQAD+RSR IR RT G Sbjct: 17 WTREQARLKASVLDRDTEAWQRDPAFSGLQRVGGVDVSFVEG-----DSASACASLVVLSYPELEVLYEESRMVSLTTPYVSGFLAFREVPFLVELVQQLRKKEPSLMPQVLLVDGNGVLHHQGFGLACHLGVLTELPCIGVAKKLLQVDGLENNALHKEKIR------------LLLAGG-------------DTF-----------PLMGSSGTVLGMALKSHDHSTKPLYVSVGHKISLEVAVRLTHRCCRFRVPEPVRQADIRSREHIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_021068747.1 (endonuclease V [Mus pahari]) HSP 1 Score: 198.0 bits (502), Expect = 4.300e-47 Identity = 117/277 (42.24%), Postives = 162/277 (58.48%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A +++ DT W+ L+ +GG+D+SF+ +S A A LV+LS+P+L+V+YE L +PY+SGFLAFRE P +V LV L++K P+LMPQ+L+VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ LIG+SG GMA T PLY+SVG ISL A+R+ CC+ R+PEP+RQAD+RSR +IR RT G Sbjct: 17 WKGEQARLKARVVDRDTEAWQRDPSFSGLQKVGGVDVSFVKG-----DSVRACASLVVLSYPELKVVYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVLLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHK------------EKIVLLQAG------------GDTF-----------PLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_003496919.1 (PREDICTED: endonuclease V isoform X1 [Cricetulus griseus]) HSP 1 Score: 197.6 bits (501), Expect = 5.600e-47 Identity = 116/277 (41.88%), Postives = 161/277 (58.12%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+ ++ DT W+ L+ +GG+D+SF+P +S+ A A LV+LS+P+L+V+YE +L +PY+SGFLAFRE P +V LV L++K P LMPQ+L+VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ L+G SG GMA T PLY+SVG ISL A+R+ CC+ R+PEP+RQAD+RSR +IR RT G Sbjct: 17 WEREQARLKTRVVPRDTEAWQRDPAFPGLRRVGGVDVSFVPG-----DSSRACASLVVLSYPELQVVYEDSHMVRLKAPYVSGFLAFREVPFLVELVQRLQEKEPGLMPQVLLVDGNGVLHQRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNSLHK------------EKIVLLQSG------------GDTF-----------PLMGNSGTVLGMALKSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_021032413.1 (endonuclease V [Mus caroli]) HSP 1 Score: 197.2 bits (500), Expect = 7.300e-47 Identity = 116/277 (41.88%), Postives = 162/277 (58.48%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A +++ DT W+ L+ +GG+D+SF+ +S A A LV+LS+P+L+V+YE L +PY+SGFLAFRE P +V LV L++K P+LMPQ+++VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ LIG+SG GMA T PLY+SVG ISL A+R+ CC+ R+PEP+RQAD+RSR +IR RT G Sbjct: 17 WKGEQARLKARVVDRDTEAWQRDPSFSGLQKVGGVDVSFVKG-----DSVRACASLVVLSYPELKVVYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVILVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHK------------EKIVLLQAG------------GDTF-----------PLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: NP_001158108.1 (endonuclease V isoform 1 [Mus musculus] >Q8C9A2.2 RecName: Full=Endonuclease V >EDL34709.1 RIKEN cDNA A730011L01, isoform CRA_b [Mus musculus]) HSP 1 Score: 196.8 bits (499), Expect = 9.600e-47 Identity = 116/277 (41.88%), Postives = 162/277 (58.48%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A +++ DT W+ L+ +GG+D+SF+ +S A A LV+LS+P+L+V+YE L +PY+SGFLAFRE P +V LV L++K P+LMPQ+++VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ LIG+SG GMA T PLY+SVG ISL A+R+ CC+ R+PEP+RQAD+RSR +IR RT G Sbjct: 17 WKGEQARLKARVVDRDTEAWQRDPSFSGLQKVGGVDVSFVKG-----DSVRACASLVVLSYPELKVVYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVVLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHK------------EKIVLLQAG------------GDTF-----------PLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_006533652.1 (PREDICTED: endonuclease V isoform X1 [Mus musculus]) HSP 1 Score: 196.8 bits (499), Expect = 9.600e-47 Identity = 116/277 (41.88%), Postives = 162/277 (58.48%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A +++ DT W+ L+ +GG+D+SF+ +S A A LV+LS+P+L+V+YE L +PY+SGFLAFRE P +V LV L++K P+LMPQ+++VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ LIG+SG GMA T PLY+SVG ISL A+R+ CC+ R+PEP+RQAD+RSR +IR RT G Sbjct: 17 WKGEQARLKARVVDRDTEAWQRDPSFSGLQKVGGVDVSFVKG-----DSVRACASLVVLSYPELKVVYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVVLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHK------------EKIVLLQAG------------GDTF-----------PLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_007958012.1 (PREDICTED: endonuclease V [Orycteropus afer afer]) HSP 1 Score: 196.8 bits (499), Expect = 9.600e-47 Identity = 118/277 (42.60%), Postives = 162/277 (58.48%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A +++ DT W+ L+ +GG+D+SF+ +S A LV+LS+P+LEV+YE L +PY+SGFLAFRE P +V V L++K P+LMPQ+L+VDGNGVLH +G G+A H+G+ T L ++G AK L VDGLE + + E++ ++ G EDT+ L+G SG GMA TNPLY+SVG ISL A+R+ +ACC+ R PEPVRQAD+RSR +IR RT G Sbjct: 17 WKREQARLKARVVDWDTEAWQRDPDFSGLQRVGGVDVSFVEG-----DSVSACVSLVVLSYPELEVVYEECRMVTLTAPYVSGFLAFREVPFLVEAVQRLQEKEPDLMPQVLLVDGNGVLHHQGFGVACHLGVLTDLPSVGVAKKLLQVDGLEKSDLHK------------EKIRLLRAG------------EDTF-----------PLVGGSGVVLGMALKSHDHSTNPLYVSVGHRISLEAAVRLTRACCRFRTPEPVRQADIRSREYIR-RTLG 252
BLAST of NO08G00520 vs. NCBI_GenBank
Match: XP_011247389.1 (PREDICTED: endonuclease V isoform X2 [Mus musculus]) HSP 1 Score: 196.8 bits (499), Expect = 9.600e-47 Identity = 116/277 (41.88%), Postives = 162/277 (58.48%), Query Frame = 0 Query: 34 WSAIQARLQAAIIETDTFVWE------DLKLIGGLDLSFLPSENKNEESNEAVACLVILSFPQLEVLYESFLPTKLNSPYISGFLAFREAPPMVALVLELRQKHPELMPQLLIVDGNGVLHPRGCGLASHVGLKTGLATLGCAKTFLHVDGLETKGVREVMRGGGGGEREGEEVLMVDGGLGKWRKVEEGKLEDTYVNGSTSCSRSLTLIGASGRTFGMAF-CPPGITNPLYISVGTGISLPFAMRVVQACCKHRVPEPVRQADLRSRAWIRGRTQG 304 W QARL+A +++ DT W+ L+ +GG+D+SF+ +S A A LV+LS+P+L+V+YE L +PY+SGFLAFRE P +V LV L++K P+LMPQ+++VDGNGVLH RG G+A H+G+ T L +G AK L VDGLE + + E+++++ G DT+ LIG+SG GMA T PLY+SVG ISL A+R+ CC+ R+PEP+RQAD+RSR +IR RT G Sbjct: 17 WKGEQARLKARVVDRDTEAWQRDPSFSGLQKVGGVDVSFVKG-----DSVRACASLVVLSYPELKVVYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVVLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHK------------EKIVLLQAG------------GDTF-----------PLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIR-RTLG 252 The following BLAST results are available for this feature:
BLAST of NO08G00520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00520 ID=NO08G00520|Name=NO08G00520|organism=Nannochloropsis oceanica|type=gene|length=1229bpback to top protein sequence of NO08G00520.1 >NO08G00520.1-protein ID=NO08G00520.1-protein|Name=NO08G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bpback to top Synonyms
Publications
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