NO08G00500, NO08G00500 (gene) Nannochloropsis oceanica

Overview
NameNO08G00500
Unique NameNO08G00500
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1429
Alignment locationchr8:191210..192638 -

Link to JBrowse

Properties
Property NameValue
DescriptionThioredoxin family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:191210..192638 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
GO:0009055electron transfer activity
GO:0005515protein binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0019725cellular homeostasis
GO:0006091generation of precursor metabolites and energy
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR002109Glutaredoxin
IPR004045Glutathione_S-Trfase_N
Vocabulary: Cellular Component
TermDefinition
GO:0005623cell
Homology
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: EWM26530.1 (thioredoxin family protein [Nannochloropsis gaditana])

HSP 1 Score: 532.7 bits (1371), Expect = 7.800e-148
Identity = 262/321 (81.62%), Postives = 284/321 (88.47%), Query Frame = 0 
Query:    3 RLILTSAALVVLAFQTTTVAFQP--RGRLQMIWGGQRTKKPVAIGGPVNEPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYA 322
            R  L   A +VL  Q  T+AF+P  R R+QM+WG Q TKKPV IGGP+NEPKPFSVRPDKFLDVATAS VSLLR GSGAFVQGYKV LV T++V+AG+YTFVS GGKRSKET A F+ RPKQPIILYEFQGCPFCAKVRE VSILDLDVLFYPCP+D K FRP A++RGGKSQFPYMVDPNTKVEMYES DIIQYLVD YGTGETP+GLGAG ANVVKI LAL PR GKGS+V++GGS +P KPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGS+KR+ELQARAGKFLVPFIEDPNTGVSM+ESAEIMEYL KTYA
Sbjct:    2 RHFLAITAPIVLLVQ-MTMAFRPTARSRVQMLWGSQ-TKKPVTIGGPINEPKPFSVRPDKFLDVATASAVSLLRGGSGAFVQGYKVELVGTEEVDAGDYTFVSVGGKRSKETCAAFVGRPKQPIILYEFQGCPFCAKVREAVSILDLDVLFYPCPKDGKKFRPAAVARGGKSQFPYMVDPNTKVEMYESGDIIQYLVDNYGTGETPAGLGAGYANVVKIGLALAPRIGKGSKVVAGGSNIPQKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSSKRRELQARAGKFLVPFIEDPNTGVSMFESAEIMEYLTKTYA 320
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: PSC77062.1 (hypothetical protein C2E20_0521 [Micractinium conductrix])

HSP 1 Score: 325.5 bits (833), Expect = 1.900e-85
Identity = 161/286 (56.29%), Postives = 208/286 (72.73%), Query Frame = 0 
Query:   38 TKKPVAIGGPVNEPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSAT-FIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYAA 323
            T+ P+A  GP  EP+ F+V   +  ++A+A+  +L+R GSGAFV GYK +LV     + G+Y  +S  G+  +E SA     RP QP++LYEF+GCPFC KVRE VSILDLDV+FYP P+D   +RPEAI+RGGK QFPYM+DPNT  EMYES  II+Y+  +YG GE P GL  G   V+   LA+LPR  KGS     GSK+P +PL+YWGYEASPFC++V+EK+ ELE+PH+ +SCARGS KR+ L  R G F VP+IEDPNTGV+M+ES+ I+EYLEKTY +
Sbjct:   49 TELPLA--GP--EPRRFTVAEGQLKNIASAAFPALMRLGSGAFVSGYKSSLVPE---QPGQYAVISFLGRSIREDSAVGGFPRPAQPLVLYEFEGCPFCRKVREAVSILDLDVVFYPTPKDGPTWRPEAIARGGKRQFPYMIDPNTGKEMYESDAIIEYMFKSYGNGEVPLGLRLGPLTVISCGLAMLPRMAKGS-AYKKGSKLPKEPLVYWGYEASPFCKVVREKMCELEVPHLYRSCARGSPKRQSLFERRGTFQVPYIEDPNTGVAMFESSAIVEYLEKTYGS 326
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: XP_009393388.1 (PREDICTED: uncharacterized protein LOC103979087 isoform X1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 316.2 bits (809), Expect = 1.100e-82
Identity = 154/272 (56.62%), Postives = 189/272 (69.49%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYA 322
            EPK FSVRPDKFLD+  AS     R G+G FV GY V+LV  D++  GEY    +G    + ++    ARP++PI +YEF+GCPFC KVRE+VSILDLD+L+YPCPR+S  FRP+ +  GGK QFPYMVDPNT V MYES DII+YLV  YG G TP  L  G    +    A++ R GKGS      SK P  PL  W YE SPFC++V+E L ELELPH+ +S ARGS KR+EL  R G+F VP++EDPNTGV M+ESAEI++YL  TYA
Sbjct:   60 EPKRFSVRPDKFLDILGASLALPCRLGTGVFVLGYSVSLVSEDKIPPGEYALKIAGLTFKETSNLGAQARPEKPIEIYEFEGCPFCRKVREIVSILDLDILYYPCPRNSPNFRPKVLQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVQKYGDGTTPLMLSLGLLTTLTEGFAMIGRMGKGSSY--SPSKTPPMPLEIWAYEGSPFCKIVREVLVELELPHIFRSTARGSPKRQELYKRVGRFQVPYLEDPNTGVKMFESAEIIDYLRTTYA 329
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: CEL95407.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 313.9 bits (803), Expect = 5.700e-82
Identity = 157/285 (55.09%), Postives = 193/285 (67.72%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVAL--VDTDQ------------VEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTY 321
            +P+ F++RPDK LD+ATAS   + R GSGA V GY+V+    DTD             ++  EYTFV+  G+++ ET+     RP  P+ LYEF+GCPFC KVRE VSILDLDVLFYPCP+D KV+RP  ++R GKSQFPY+VDPN K+EMYES DIIQYL DTY  G+ P  L  G    +   L L PR GKGSR I   SK P +PLI WGYE SPF ++V+E L+  ELPH+ K CARGS KR  L  + G F VP++EDPNTGV M+ESAEI+ YL   Y
Sbjct:   46 KPRKFAIRPDKALDIATASAGLVFRLGSGALVNGYRVSFEKADTDTPKDAPQTRAPSGLDEDEYTFVTVAGRKTVETN-RLGKRPAVPLELYEFEGCPFCRKVREAVSILDLDVLFYPCPKDGKVYRPRLVARAGKSQFPYLVDPNEKLEMYESDDIIQYLFDTYSDGKVPLFLRLGPFTTITCGLGLAPRLGKGSRYIP--SKSPREPLILWGYEGSPFVKIVREVLSSRELPHLMKFCARGSPKRSALLKKTGTFQVPYLEDPNTGVKMFESAEIVNYLNDEY 327
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: XP_016711714.1 (PREDICTED: uncharacterized protein LOC107925506 [Gossypium hirsutum])

HSP 1 Score: 313.5 bits (802), Expect = 7.400e-82
Identity = 149/272 (54.78%), Postives = 190/272 (69.85%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYA 322
            EPKPF++RPDK  DV  AS     R G+G FV GY  +LV   ++  G+Y+ +  GG + KETS     RP++PI +YEF+GCPFC KVRE+V++LD+DVLFYPCP++   FRP+    GGK QFPYMVDPNT V MYES DII+YLV+ YG G  P  L  G    +    A++ R G+G+      SK+P KPL  W YE SPFC++++E L ELELPH+Q+SCARGS KR+ L  +AG F VP++EDPNTGV M+ESAEI+EYL  TYA
Sbjct:   75 EPKPFAIRPDKTWDVVGASLALFFRLGTGVFVSGYSASLVSEKEIPPGQYS-LELGGSKVKETS-KIGRRPEKPIEIYEFEGCPFCRKVREIVAVLDIDVLFYPCPKNGPNFRPKVAQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVEKYGDGSVPFMLSLGLLTTLTAGFAMIGRMGRGNSYTP--SKLPPKPLEIWSYEGSPFCKIIREVLVELELPHIQRSCARGSPKRQILYEKAGHFQVPYLEDPNTGVQMFESAEIVEYLRATYA 342
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: XP_017623221.1 (PREDICTED: uncharacterized protein LOC108467179 [Gossypium arboreum])

HSP 1 Score: 313.5 bits (802), Expect = 7.400e-82
Identity = 149/272 (54.78%), Postives = 190/272 (69.85%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYA 322
            EPKPF++RPDK  DV  AS     R G+G FV GY  +LV   ++  G+Y+ +  GG + KETS     RP++PI +YEF+GCPFC KVRE+V++LD+DVLFYPCP++   FRP+    GGK QFPYMVDPNT V MYES DII+YLV+ YG G  P  L  G    +    A++ R G+G+      SK+P KPL  W YE SPFC++++E L ELELPH+Q+SCARGS KR+ L  +AG F VP++EDPNTGV M+ESAEI+EYL  TYA
Sbjct:   74 EPKPFAIRPDKTWDVVGASLALFFRLGTGVFVSGYSASLVSEKEIPPGQYS-LELGGSKVKETS-KIGRRPEKPIEIYEFEGCPFCRKVREIVAVLDIDVLFYPCPKNGPNFRPKVAQMGGKQQFPYMVDPNTGVAMYESDDIIKYLVEKYGDGSVPFMLSLGLLTTLTAGFAMIGRMGRGNSYTP--SKLPPKPLEIWSYEGSPFCKIIREVLVELELPHIQRSCARGSPKRQILYEKAGHFQVPYLEDPNTGVQMFESAEIVEYLRATYA 341
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: EPS67072.1 (hypothetical protein M569_07704, partial [Genlisea aurea])

HSP 1 Score: 312.8 bits (800), Expect = 1.300e-81
Identity = 153/272 (56.25%), Postives = 192/272 (70.59%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYA 322
            +PKPFSVRPDK LD   AS   + R  +G FV GY + +V  +++ + +Y    +G K  KETS      P++PI +YEF+GCPFC KVRE+V+ILDLDVL+YPCPR+ + FRP+ +  GGK QFPYMVDPNT V MYES DII+YLV  YG G  P  L  G    +   LA++ R GKGS  I   SK+P +PL  W YEASPFC+LV+E LNELELPH+  SCARGS KR+ L+ R G F VP++EDPNTG+ M+ESAEI+EYL+ TYA
Sbjct:   45 KPKPFSVRPDKILDTVGASLALIFRLATGVFVSGYSLRIVPANEIPSNQYALELAGFK-IKETS-NLRPGPEKPIEIYEFEGCPFCRKVREIVAILDLDVLYYPCPRNGRHFRPKVLQIGGKQQFPYMVDPNTGVSMYESDDIIKYLVGKYGDGNIPWTLSLGPLTTLTEGLAMIGRAGKGSSYIP--SKLPPQPLEIWAYEASPFCKLVREVLNELELPHLLHSCARGSPKRQALRDRVGHFQVPYLEDPNTGIQMFESAEIIEYLKATYA 312
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: XP_009130789.2 (PREDICTED: uncharacterized protein LOC103855546 [Brassica rapa])

HSP 1 Score: 312.4 bits (799), Expect = 1.700e-81
Identity = 152/273 (55.68%), Postives = 193/273 (70.70%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYAA 323
            EPK F+V+P K LDV  A+   LLR G+G FV GY  + V  D + A +Y  +  GG   KETS     RP++PI +YEF+GCPFC KVRE+V++LDLD+L+YPCPR S  FRP     GGK QFPYMVDPNT V MYES  II+YL + YG G  P  L  G    +  + A L R GKG+  +   +K+P KP+++W YE SPFC+LV+E L ELELPH+Q+SCARGS KR+EL  +AG F VP++EDPNTGV+M+ESAEI+EYL++TYAA
Sbjct:   90 EPKRFAVKPGKLLDVLGAAIGVLLRLGTGVFVSGYSASFVSKDAIPADQYA-LRIGGITVKETS-RLGPRPQKPIEIYEFEGCPFCRKVREMVTVLDLDILYYPCPRGSPNFRPMVTQMGGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLSLGPLTAITAAFATLGRLGKGN--LYTPAKLPPKPIVFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQELLTKAGHFQVPYLEDPNTGVNMFESAEIIEYLKQTYAA 358
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: OMO68358.1 (Thioredoxin-like protein [Corchorus olitorius])

HSP 1 Score: 312.4 bits (799), Expect = 1.700e-81
Identity = 153/272 (56.25%), Postives = 190/272 (69.85%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYA 322
            EPK FSVRPD+ LD+  AS     R G+G FV GY  ++V  +++  G+Y  +  GG + KET A    RP++PI +YEF+ CPFC KVRE+V+ LD+DVLFYPCPR+   FRP+A   GGK QFPYMVDPNT V MYES +II+YLVD YG G TP  L  G    +    AL+ R G+GS      SK+P KPL  W YE SPFC++V+E L ELELPH+Q+SCARGS KR+ L  R G F VP++EDPNTGV M+ESAEI+EYL+ TYA
Sbjct:   76 EPKAFSVRPDQTLDILGASLALFFRVGTGVFVNGYSSSVVSENEIPPGQYC-LQVGGNKVKET-AKIGPRPEKPIEIYEFESCPFCRKVREIVAYLDIDVLFYPCPRNGPNFRPKAAQLGGKQQFPYMVDPNTGVAMYESDEIIKYLVDKYGDGSTPLMLKLGLLTTLTAGFALIGRMGRGSSYTP--SKMPPKPLEIWAYEGSPFCKIVREVLVELELPHIQRSCARGSPKRQILYERVGHFQVPYLEDPNTGVQMFESAEIVEYLKATYA 343
[Close]
BLAST of NO08G00500 vs. NCBI_GenBank
Match: CDY11276.1 (BnaA03g01120D [Brassica napus])

HSP 1 Score: 312.0 bits (798), Expect = 2.200e-81
Identity = 151/273 (55.31%), Postives = 194/273 (71.06%), Query Frame = 0 
Query:   50 EPKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYTFVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVLFYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTYGTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGYEASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDPNTGVSMYESAEIMEYLEKTYAA 323
            EPK F+V+P K LDV  A+   LLR G+G FV GY  + V  + + A +Y  +  GG   KETS   + RP +PI +YEF+GCPFC KVRE+V++LDLD+L+YPCPR S  FRP     GGK QFPYMVDPNT V MYES  II+YL + YG G  P  L  G    +  + A+L R GKG+  +   +K+P KP+++W YE SPFC+LV+E L ELELPH+Q+SCARGS KR+EL  +AG F VP++EDPNTGV+M+ESAEI+EYL++TYAA
Sbjct:   69 EPKRFAVKPGKLLDVLGAAIGVLLRLGTGVFVSGYSASFVSKNAIPADQYA-LRIGGITVKETSRLGL-RPAKPIEIYEFEGCPFCRKVREMVTVLDLDILYYPCPRGSPNFRPMVTQMGGKQQFPYMVDPNTGVSMYESDGIIKYLSEKYGDGTVPLSLSLGPLTAITAAFAMLGRLGKGN--LYTPAKLPPKPIVFWAYEGSPFCKLVREVLVELELPHIQRSCARGSPKRQELLTKAGHFQVPYLEDPNTGVNMFESAEIIEYLKQTYAA 337
The following BLAST results are available for this feature:
BLAST of NO08G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26530.17.800e-14881.62thioredoxin family protein [Nannochloropsis gadita... [more]
PSC77062.11.900e-8556.29hypothetical protein C2E20_0521 [Micractinium cond... [more]
XP_009393388.11.100e-8256.62PREDICTED: uncharacterized protein LOC103979087 is... [more]
CEL95407.15.700e-8255.09unnamed protein product [Vitrella brassicaformis C... [more]
XP_016711714.17.400e-8254.78PREDICTED: uncharacterized protein LOC107925506 [G... [more]
XP_017623221.17.400e-8254.78PREDICTED: uncharacterized protein LOC108467179 [G... [more]
EPS67072.11.300e-8156.25hypothetical protein M569_07704, partial [Genlisea... [more]
XP_009130789.21.700e-8155.68PREDICTED: uncharacterized protein LOC103855546 [B... [more]
OMO68358.11.700e-8156.25Thioredoxin-like protein [Corchorus olitorius][more]
CDY11276.12.200e-8155.31BnaA03g01120D [Brassica napus][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009018NSK009018Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00500.1NO08G00500.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552717gene_3377Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100141g14gene3992Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00500.1NO08G00500.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00500 ID=NO08G00500|Name=NO08G00500|organism=Nannochloropsis oceanica|type=gene|length=1429bp
ACAGACAAATGGGACGTCTCATCCTCACGAGCGCGGCATTGGTCGTTCTC
GCGTTTCAGACTACCACTGTTGCCTTCCAACCTCGTGGCCGCCTGCAAAT
GATTTGGGGAGGGCAACGAACTAAAAAGCCCGTCGCCATTGGCGGCCCCG
TCAATGAGCCCAAACCTTTCAGCGTTCGCCCGGACAAGTTCCTCGACGTC
GCCACAGCCAGCACAGTCAGCTTGTTGCGTGCGGGCTCCGGGGCATTCGT
CCAGGGGTACAAGGTCGCACTCGTCGACACGGATCAAGTCGAAGCAGGCG
AATACACCTTTGTGTCCAGTGGGGGGAAACGCAGCAAGGAGACCAGTGCC
ACTTTCATCGCCCGCCCTAAGCAACCTATCATCCTTTACGAATTCCAAGG
CTGCCCTTTCTGTGCGAAGGTCCGAGAAGTCGTCTCCATCTTGGATCTCG
ACGTGTTGTTTTACCCCTGTCCGAGGGACAGCAAGGTGTTCCGTCCGGAA
GCCATCTCTCGAGGGGGCAAGTCGCAGTTCCCTTACATGGTGGACCCCAA
CACCAAAGTGgtgggtggaagaaaaagaggaggggaaagagggaggaggg
aggggaaagcgatcggaaacgacgctcgatagggagtgaaggaggtgttg
tgtcctcatgatggttttagccttagttcgtctttgttcaaacgcacctc
ctccctccttccctccctccctcctcctcctagGAAATGTACGAATCCGC
AGACATAATCCAATACCTCGTCGACACGTACGGCACGGGAGAGACCCCCT
CAGGTCTCGGAGCAGGCACGGCGAACGTAGTCAAAATCAGCCTCGCTTTG
CTCCCGCGCTTCGGAAAAGGTAGCCGGGTGATTTCGGGTGGTTCCAAGGT
CCCTTCGAAGCCTCTCATTTACTGGGGCTACGAGGCCTCTCCCTTCTGCA
GGCTTGTCAAGGAAAAACTCAATGAATTAGAGCTTCCGCATGTCCAGAAA
TCGTGTGCCCGAGGCAGTGCAAAACGCAAGGAGCTGCAGGCTCGTGCGGG
GAAATTCCTTGTCCCATTTATTGAGGATCCTAATACTGGTGTGAGCATGT
ACGAGAGTGCGGAGATTATGGAGTACCTCGAGAAGACGTATGCGGCCTAG
GGGGATGGGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGA
GGGAGGGAGGGAGGAGGGAGGGAGGGAAGAGGGTGGGAGGAAGGGAGGGA
TTGAAGAGGATCAGGATCTGCAGTGAAAGGGAATGAGCCGAAGCCTCCAA
TACGGAATTGGAAGCAGGGAGGGATGAAGGAAGGGAGAGGAATTGAAGAG
GGATTGGACGCGTGCTGTATCATGACGTTTGAAGGAGGGAGGGAGGGAGG
AGTTGAGGGAGGGAGGGAGGAGTTGAGGG
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protein sequence of NO08G00500.1

>NO08G00500.1-protein ID=NO08G00500.1-protein|Name=NO08G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bp
MGRLILTSAALVVLAFQTTTVAFQPRGRLQMIWGGQRTKKPVAIGGPVNE
PKPFSVRPDKFLDVATASTVSLLRAGSGAFVQGYKVALVDTDQVEAGEYT
FVSSGGKRSKETSATFIARPKQPIILYEFQGCPFCAKVREVVSILDLDVL
FYPCPRDSKVFRPEAISRGGKSQFPYMVDPNTKVEMYESADIIQYLVDTY
GTGETPSGLGAGTANVVKISLALLPRFGKGSRVISGGSKVPSKPLIYWGY
EASPFCRLVKEKLNELELPHVQKSCARGSAKRKELQARAGKFLVPFIEDP
NTGVSMYESAEIMEYLEKTYAA*
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Synonyms
Publications