NO08G00470, NO08G00470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00470 vs. NCBI_GenBank
Match: EWM26528.1 (eukaryotic translation initiation factor [Nannochloropsis gaditana]) HSP 1 Score: 339.0 bits (868), Expect = 1.400e-89 Identity = 245/313 (78.27%), Postives = 255/313 (81.47%), Query Frame = 0 Query: 1 MADVVEEERSTSTEPAEGGDP-DAGLFDGKXXXXXXXXXXXXXXXXXXDLDAVFAKKKKGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEEG--------------------------------AVYDSKEANYSYDELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 MADV EEE T+TEP EG D DAGLFDG XXXXXXXXXXXXXXXX DLDAVFA KKK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G AVYDS EANYSYDELL+RMQ LLQDGDP+K V+ GRVPIKMPPI LVRIGTKKTRWDNF DICKCMNRT+EH+FQFLVAELGTEGSIDGNNRLVLRGKY+PKGIESLLRKYIGEYVAC+TCKSP+TSLSRDSVSRL+FVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK Sbjct: 1 MADVTEEENPTATEPTEGDDDVDAGLFDGXXXXXXXXXXXXXXXXXSADLDAVFAVKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGEDAGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNAVYDSNEANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 313
BLAST of NO08G00470 vs. NCBI_GenBank
Match: XP_009033963.1 (hypothetical protein AURANDRAFT_14493, partial [Aureococcus anophagefferens] >EGB11615.1 hypothetical protein AURANDRAFT_14493, partial [Aureococcus anophagefferens]) HSP 1 Score: 217.2 bits (552), Expect = 6.300e-53 Identity = 109/157 (69.43%), Postives = 125/157 (79.62%), Query Frame = 0 Query: 120 YSYDELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRR 277 YSY ELL R+ +LQ +P +S R PP L+R+GTKKT W NFQ+ICK M+R+ EH+FQF +AELGTEGSIDG RLV+RGKYVPK IESLLRKYI EYV C C+SPSTSL+RDSVSRL+F+HCQ CGSSRSVAPIR GFHAQTRADRR Sbjct: 1 YSYKELLDRVVGILQANNPE--LSEKRRHTMKPP-QLMRVGTKKTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADRR 154
BLAST of NO08G00470 vs. NCBI_GenBank
Match: CBJ33336.1 (eukaryotic initiation factor 2 beta subunit [Ectocarpus siliculosus]) HSP 1 Score: 215.7 bits (548), Expect = 1.800e-52 Identity = 107/157 (68.15%), Postives = 124/157 (78.98%), Query Frame = 0 Query: 123 DELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALR 280 + LL+R+Q LL +P R I + P L+R+GT+KT W NFQDIC+ M R EH+F F+VAELGTEGSIDGN RLVLRGKYVPK IESLLRKYI EYV C C+SP+T+L+RD VSRL+FVHCQ CGSSRSVAPIR+GFHAQTRADRRALR Sbjct: 75 ETLLERIQNLLHVNNPELA---ERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 228
BLAST of NO08G00470 vs. NCBI_GenBank
Match: OWZ06483.1 (Eukaryotic translation initiation factor 2 subunit beta [Phytophthora megakarya]) HSP 1 Score: 215.7 bits (548), Expect = 1.800e-52 Identity = 111/176 (63.07%), Postives = 131/176 (74.43%), Query Frame = 0 Query: 106 AGEEGAVYDSKEANYSY-DELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A E +V A YSY DELL R+ L + +P R M P L+R+GTKKT W NFQ+IC+ M+R+ EH+ QF +AELGTEGSIDGN RLV+RG+YVPK IESLLRKYI EYV+C C+SP+T+L+RDSVSRLYFVHCQ CGSSRSVA IR+GFHA TRADRRA RK Sbjct: 59 APEGNSVLVQDPATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAARK 231
BLAST of NO08G00470 vs. NCBI_GenBank
Match: XP_009530605.1 (hypothetical protein PHYSODRAFT_346938 [Phytophthora sojae] >EGZ13176.1 hypothetical protein PHYSODRAFT_346938 [Phytophthora sojae]) HSP 1 Score: 214.2 bits (544), Expect = 5.300e-52 Identity = 108/164 (65.85%), Postives = 127/164 (77.44%), Query Frame = 0 Query: 118 ANYSY-DELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A YSY DELL R+ L + +P R M P L+R+GTKKT W NFQ+IC+ M+R+ EH+ QF +AELGTEGSIDGN RLV+RG+YVPK IESLLRKYI EYV+C C+SP+T+L+RDSVSRLYFVHCQ CGSSRSVA IR+GFHA TRADRRA RK Sbjct: 73 ATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAARK 233
BLAST of NO08G00470 vs. NCBI_GenBank
Match: XP_008908629.1 (hypothetical protein PPTG_13913 [Phytophthora parasitica INRA-310] >ETI42579.1 hypothetical protein F443_12318 [Phytophthora parasitica P1569] >ETK82597.1 hypothetical protein L915_12038 [Phytophthora parasitica] >ETL35986.1 hypothetical protein L916_11963 [Phytophthora parasitica] >ETL89205.1 hypothetical protein L917_11806 [Phytophthora parasitica] >ETM42464.1 hypothetical protein L914_11874 [Phytophthora parasitica] >ETN06127.1 hypothetical protein PPTG_13913 [Phytophthora parasitica INRA-310] >ETO71248.1 hypothetical protein F444_12418 [Phytophthora parasitica P1976] >ETP12295.1 hypothetical protein F441_12302 [Phytophthora parasitica CJ01A1] >ETP40423.1 hypothetical protein F442_12234 [Phytophthora parasitica P10297] >KUF84856.1 Eukaryotic translation initiation factor 2 subunit beta [Phytophthora nicotianae]) HSP 1 Score: 214.2 bits (544), Expect = 5.300e-52 Identity = 108/164 (65.85%), Postives = 127/164 (77.44%), Query Frame = 0 Query: 118 ANYSY-DELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A YSY DELL R+ L + +P R M P L+R+GTKKT W NFQ+IC+ M+R+ EH+ QF +AELGTEGSIDGN RLV+RG+YVPK IESLLRKYI EYV+C C+SP+T+L+RDSVSRLYFVHCQ CGSSRSVA IR+GFHA TRADRRA RK Sbjct: 73 ATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAARK 233
BLAST of NO08G00470 vs. NCBI_GenBank
Match: XP_002898512.1 (eukaryotic translation initiation factor 2 subunit beta [Phytophthora infestans T30-4] >EEY62989.1 eukaryotic translation initiation factor 2 subunit beta [Phytophthora infestans T30-4]) HSP 1 Score: 214.2 bits (544), Expect = 5.300e-52 Identity = 108/164 (65.85%), Postives = 127/164 (77.44%), Query Frame = 0 Query: 118 ANYSY-DELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A YSY DELL R+ L + +P R M P L+R+GTKKT W NFQ+IC+ M+R+ EH+ QF +AELGTEGSIDGN RLV+RG+YVPK IESLLRKYI EYV+C C+SP+T+L+RDSVSRLYFVHCQ CGSSRSVA IR+GFHA TRADRRA RK Sbjct: 73 ATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAARK 233
BLAST of NO08G00470 vs. NCBI_GenBank
Match: GAX99167.1 (eukaryotic translation initiation factor 2 subunit beta [Pythium insidiosum]) HSP 1 Score: 212.2 bits (539), Expect = 2.000e-51 Identity = 106/164 (64.63%), Postives = 125/164 (76.22%), Query Frame = 0 Query: 118 ANYSY-DELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A YSY D+LL R+ L + +P R M P L+R+GTKKT W NFQ+IC+ M+R EH+ QF +AELGTEGSIDGN RLV+RG+YVPK IESLLRKYI EYV C C+SP+T+L+RDSVSRLYFVHCQ CGSSRSV+ IR+GFHA TRADRRA RK Sbjct: 93 ATYSYKDDLLARIMAKLHENNPELS---DRKRHSMKPPQLMRVGTKKTLWVNFQEICQMMHRNPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVSAIRSGFHAATRADRRAARK 253
BLAST of NO08G00470 vs. NCBI_GenBank
Match: XP_008614506.1 (translation initiation factor 2 subunit 2 [Saprolegnia diclina VS20] >EQC32104.1 translation initiation factor 2 subunit 2 [Saprolegnia diclina VS20]) HSP 1 Score: 211.1 bits (536), Expect = 4.500e-51 Identity = 102/163 (62.58%), Postives = 126/163 (77.30%), Query Frame = 0 Query: 118 ANYSYDELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A+Y+Y+E+L R+ L + +P R M P L+R+GTKKT W NFQ+ICK M+R EH+ QF ++ELGTEGSIDG+ RLV+RG+YVPK IESLLRKYI EYV C C+SP+T+L+RD+VSRL+FVHCQ CGSSRSVA IR+GFHA TRADRRA RK Sbjct: 69 ASYTYEEMLDRVMNKLHELNPELS---NRTKHTMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFHAATRADRRAARK 228
BLAST of NO08G00470 vs. NCBI_GenBank
Match: OQR98102.1 (eukaryotic translation initiation factor 2 subunit beta [Achlya hypogyna]) HSP 1 Score: 210.7 bits (535), Expect = 5.900e-51 Identity = 102/163 (62.58%), Postives = 126/163 (77.30%), Query Frame = 0 Query: 118 ANYSYDELLQRMQMLLQDGDPSKGVSFGRVPIKMPPINLVRIGTKKTRWDNFQDICKCMNRTVEHLFQFLVAELGTEGSIDGNNRLVLRGKYVPKGIESLLRKYIGEYVACTTCKSPSTSLSRDSVSRLYFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 281 A+Y+Y+E+L R+ L + +P R M P L+R+GTKKT W NFQ+ICK M+R EH+ QF ++ELGTEGSIDG+ RLV+RG+YVPK IESLLRKYI EYV C C+SP+T+L+RD+VSRL+FVHCQ CGSSRSVA IR+GFHA TRADRRA RK Sbjct: 72 ASYTYEEMLDRVMNKLHELNPELS---NRTKSVMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVMCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFHAATRADRRAARK 231 The following BLAST results are available for this feature:
BLAST of NO08G00470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00470 ID=NO08G00470|Name=NO08G00470|organism=Nannochloropsis oceanica|type=gene|length=1187bpback to top protein sequence of NO08G00470.1 >NO08G00470.1-protein ID=NO08G00470.1-protein|Name=NO08G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=281bpback to top Synonyms
Publications
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