NO08G00310, NO08G00310 (gene) Nannochloropsis oceanica

Overview
NameNO08G00310
Unique NameNO08G00310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4424
Alignment locationchr8:119963..125871 -

Link to JBrowse

Properties
Property NameValue
DescriptionDna polymerase lambda
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:119963..125871 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029398PolB_thumb
IPR027421DNA_pol_X_lyase_dom
IPR028207DNA_pol_B_palm_palm
IPR010996DNA_pol_b-like_N
IPR018944DNA_pol_lambd_fingers_domain
IPR002054DNA-dir_DNA_pol_X
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0034061DNA polymerase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Homology
BLAST of NO08G00310 vs. NCBI_GenBank
Match: GAX95575.1 (DNA polymerase lambdalike protein putative, partial [Pythium insidiosum])

HSP 1 Score: 234.6 bits (597), Expect = 1.200e-57
Identity = 144/355 (40.56%), Postives = 200/355 (56.34%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPAL-WKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EEL     M      +  +R+  Y ++VS LK++  +V    V+ L+ +      +   + EIL  G+L +LEA K+   +   +   +IWGVGP TA  LY + G  S+  L A       +LN  Q+IGL+YY++   +IPRAE  EIE+ V      L P+  T   CGSYRRG +  GD DIL       E   D++  ++RRL   GFLTD LT   ++      ++Y G+C L    PHRRLD+K YPR  + FA+LYFTGSD+FNRSMR +A   KGWSL+D+++   +  + G KV + G+ V+C  E  +F ALGL YK P ERN  D   L+E+E
Sbjct:  295 NLNAHLTDPLEEL-----MXFLHVERDIWREYSYKKVVSSLKAMRTRV--SXVRDLKGLWWAKGRMRDKVVEILETGKLEKLEAKKINPRLQTLVQMARIWGVGPATAAKLY-NMGYKSMEALYANA---ESVLNFQQQIGLRYYDDFLTKIPRAEVQEIEKTVVDEVHRLLPQA-TALACGSYRRGKASSGDCDILITDPNSEEC--DILPELLRRLHASGFLTDDLTHISNEHHMGRCDTYMGVCQLRXDLPHRRLDIKVYPRRCFGFALLYFTGSDHFNRSMRLFA-RKKGWSLSDRALKRVVRVRKGTKV-EAGEAVVCESEVDVFIALGLEYKDPTERNCFDIRFLDEDE 633          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: CCA20232.1 (DNA polymerase lambdalike protein putative [Albugo laibachii Nc14])

HSP 1 Score: 234.2 bits (596), Expect = 1.500e-57
Identity = 144/355 (40.56%), Postives = 200/355 (56.34%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEEG 760
            NLN HLT   EEL    E L  E  Q  +R   Y ++V  LK +  ++    VK +Q +      +   + E+L  GR+ +LEA +    +   L F +IWGVGP TA  LY+  G  ++A+L         +L++ QRIGL++Y++  ++IPR E  +IE  V      + PR   M  CGSYRRG    GD DIL   T+  E    L+  ++ RL  + F+TD LT    D      +SY G+C + +  PHRRLD+K YPR  YPFA+LYFTGSD+FNRSMR +A   +G+SL+D+ + P +   G ++ D+GD V C +E  IF ALGL YK P ERN  D   L+E EG
Sbjct:  275 NLNSHLTGPLEEL---IEFLHIEKDQ--WRVNSYKKVVGSLKVMQVRL--STVKDIQGLWWAKGRMYSRVAELLETGRMEKLEAKRRNPRLQTMLSFARIWGVGPTTAIKLYDL-GFRTLADLEE---AGSSVLSQQQRIGLRHYDDFLKKIPREEVKQIESIVVDEVHQILPRANAM-ACGSYRRGKEISGDCDILI--TDPDEEECGLLPELLVRLRHKNFITDDLTQV-SDHHMGRCDSYMGVCRVNEHLPHRRLDIKVYPRRFYPFALLYFTGSDHFNRSMRLYA-KKRGYSLSDRFLKPVMRASGHQI-DIGDFVKCTNEAEIFIALGLEYKDPLERNCFDVCFLKENEG 612          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_008880156.1 (hypothetical protein H310_14139 [Aphanomyces invadans] >ETV91319.1 hypothetical protein H310_14139 [Aphanomyces invadans])

HSP 1 Score: 233.8 bits (595), Expect = 2.000e-57
Identity = 185/554 (33.39%), Postives = 262/554 (47.29%), Query Frame = 0
Query:  238 IWIVEKYDQISTRIAKRWRQVLGKHGARFHPHFVPGKTRVVILPSRLSRATVNKLLPCDCRDVRLLTQEWAVEAIKRA--------IALGEAKTKEGGXXXXXXXXXXXGGLRPPPYAQYLFVDPADL-----TAHGAAAXXXXXXXXXXXREGKDKGRKRLRGAVGRWGCM--EASSDGIV---------NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRA--EASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFA-PTEGRESVGDLIWRVVRRLEE-EGFLTDHLTSTRHDSVHDFSESYFGICCL----------------GQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERN 748
            I+ V     ++ R    W+  L K G      + PG T +V+  + L+R  +  + P    D R+++ EWA++ ++           A+ EA              XXX    P P    +  + + L      A+   +           RE        +R        M  + + D  V         NLN HLT  FE+L     +  +E     +R+  Y R+ S+LK LP ++   +    Q   G+  +    I+EIL  G L +LEA K    +   L F KIWGVGPVTA  LY + G  ++ ++R +      +L ENQRIGLK+Y++   +IPR+  E  EIE  V+Q    L PR   + TCGSYRRG    GDVD+L + PT+   ++      + R +E  + +LT  LT+     + D S+SY G+C L                GQG  HRR+DLK YPR  + FA LYFTGSD+FNRSMR +A   KG+SLTDK +  A    G K    G  VIC DE+ +F AL L YK P ERN
Sbjct:   53 IYFVPVGQDMTRRRLDIWKTQLTKRGVHVDDAYRPGATTIVVASTTLTRERLASVCPGIASDCRVVSPEWAIQLLQTRQLPSQCSWHAVDEAPP---STTLPSPPSXXXXXXXPQPVQDNILPESSSLECTPMPAYQIQSQDDEETDWVARRELFYTHNPEMRAIHAEESAMPRKVNMDAFVCTTSSVLKTNLNAHLTAPFEQLVEYLHVEHDE-----WRENSYKRICSILKQLPVRITSADAIHPQ--HGLNANGIAKIREILETGTLRKLEAKKADARLQVLLRFSKIWGVGPVTATNLY-NAGFRTLDDVRRK---QADVLTENQRIGLKHYDDFLVKIPRSSGEVDEIESVVKQYVHKLLPRAVAV-TCGSYRRGKGQSGDVDVLISDPTQDDCNI------LPRTVESCKPWLTYDLTTMDEHHIGD-SDSYMGVCRLREVGSRPRDIVKRTGRGQGMRHRRIDLKVYPRNLFGFAQLYFTGSDHFNRSMRAFA-KTKGYSLTDKGLYKAARSKGVKKLKKGPNVICRDEKDVFIALQLPYKRPEERN 583          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: GAY05668.1 (DNA polymerase lambdalike protein putative, partial [Pythium insidiosum])

HSP 1 Score: 232.3 bits (591), Expect = 5.800e-57
Identity = 141/355 (39.72%), Postives = 200/355 (56.34%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPAL-WKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EEL     +      +  +R+  Y ++VS LK++  +V    V+ L+ +      +   + EIL  G+L +LEA K+   +   +   KIWGVGP TA  LY + G  S+  L A       +LN  Q+IGL+YY++   +IPRAE  EIE+ V      L P+  T   CGSYRRG +  GD DIL       E   D++  ++RRL   GF+TD LT   ++      ++Y G+C L Q  PHRRLD+K YPR  + FA+LYFTGSD+FNRSMR +A   KGWSL+D+++   +  + G KV + G+ V+C  E  +  ALG+ YK P ERN  +   L+E+E
Sbjct:  517 NLNAHLTDPLEELMDFLHV-----ERDIWREYSYKKVVSSLKAMRTRV--SRVRDLKGLWWAKGRMRDKVVEILETGKLEKLEAKKINPRLQTLVQMAKIWGVGPATAAKLY-NMGYKSMEALYANA---ESVLNFQQQIGLRYYDDFLTKIPRAEVQEIEKTVVDEVHRLLPQA-TALACGSYRRGKASSGDCDILITDPNSEEC--DILPELLRRLHATGFMTDDLTHISNEHHMGRCDTYMGVCQLRQDLPHRRLDIKVYPRRCFGFALLYFTGSDHFNRSMRLFA-RKKGWSLSDRALKRVVRVRKGTKV-EAGEAVVCESEVDVLIALGMEYKDPTERNCFEIRFLDEDE 855          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: GBG31176.1 (DNA polymerase lambda [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 228.0 bits (580), Expect = 1.100e-55
Identity = 146/379 (38.52%), Postives = 210/379 (55.41%), Query Frame = 0
Query:  381 KGRKRLRGAVGRWGCMEASSDGI-VNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDP-RGFTMTTCGSYRRGASHCGDVDILFAPTE--GRESVGDLIWRVVRRLEEEGFLT---DHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICH--DERGIFKALGLAYKHPWERNTHD 751
            K RKR     G + C ++ +  +  NLN+HLT  F+ L   YE+  +E     +RK  + R++ LL+SL FKV   +  QL+  +G+G  +   I E L  G ++R + +  +    +    Q++ G+G   AR L++  GI S+AELR     H  +LN  Q IGL+Y ++++QRIPRAE   I + V  TA +L P +   + TCGSYRRG S  GDVD++    +  G   + DLI  +  R      LT   D L   R   V    ++Y GIC L     HRRLD+K YPREQ+PFA+LYFTG+D+FNRSMR +A   KGWS++D+ +  A  +   ++      V  H   E+ +F  LG  YKHP ERN +D
Sbjct:  172 KKRKRYDAHQG-YACFKSGTIAVQPNLNEHLTNAFQPLVDYYEIFNDE----EWRKVSFKRVIDLLRSLKFKVTSAD--QLRSYRGIGPKVFAMIDEALRTGYITRAKEVWKSDAAVSLRDLQRVHGIGATVARDLHKR-GIRSVAELR----EHKELLNSVQLIGLEYLDDIEQRIPRAETGAIGKFVEDTARALWPSKALAVETCGSYRRGKSSSGDVDVILTTPDQAGCPPLADLIAELHARKFIAADLTQPKDQLPVNRQGQVAR-KQTYMGICKLPGYKVHRRLDVKFYPREQFPFALLYFTGNDHFNRSMRNFA-KRKGWSMSDEGIFSAQRQRSERIAKASRPVDTHFRTEKDVFDWLGFPYKHPTERNCYD 536          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: EJY70640.1 (Helix-hairpin-helix motif family protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 225.3 bits (573), Expect = 7.100e-55
Identity = 136/338 (40.24%), Postives = 192/338 (56.80%), Query Frame = 0
Query:  413 LFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRG---FTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERN 748
            + ++L  +Y+    EA     R   Y R ++ L+S  +K    +V+QL+ +  +G  I K +QE++  G + R E L   + V      + +WGVGP  A+ LY+  GI SI +LR     +  +L E Q+IGLKYYE+++QRIPR E +++   +RQTA  L P G     +  CGSYRRG   CGD+DIL    +G  S+   +  +V  LE++GFL + L   R    H  SE Y G+C L    P RR+D+K YP  QY FA LYFTGS  FNRSMR +A   KG+SL+D  + P +   G KV +  + V C  E  +FKAL L YK P+ER+
Sbjct:  335 IIKQLEKLYKYY--EAQDDKGRMHGYRRGLTFLRS--YKDPIYSVEQLESVPYLGNGILKKVQELIEEGSIKRFEFLSHDESVVVTELLEGVWGVGPKLAQKLYK-QGIRSIEDLR----QNQHLLTEMQKIGLKYYEDIKQRIPRHEVTQMLELIRQTAFGLIPNGEKLLKVDACGSYRRGKQSCGDIDILITKVDG-SSIHGFVKLLVLELEKQGFLKERLGGLRFS--HIGSEGYMGMCQLRPDLPFRRIDIKAYPLSQYGFAQLYFTGSGNFNRSMRLFA-QKKGYSLSDYGLTPVIRVKGEKVAEF-ESVPCETEEDVFKALNLDYKPPYERD 658          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_008613695.1 (hypothetical protein, variant [Saprolegnia diclina VS20] >EQC33009.1 hypothetical protein, variant [Saprolegnia diclina VS20])

HSP 1 Score: 224.9 bits (572), Expect = 9.200e-55
Identity = 142/344 (41.28%), Postives = 190/344 (55.23%), Query Frame = 0
Query:  404 VNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERN 748
            +N N HLT + +EL    E L  E  +  +R+  Y R+VS+LK LP KV   +   L+   G+  +    I+EIL  G L +LEA K    +     F  IWGVGP TA +LY   G  S+  LR R      +LN  QRIGL++Y +   +IPRAE  +I+  V+ T   + P   ++ TCGSYRRG    GDVDIL       E V  L+  ++R L +  FLTD LT+     +    +SY G+C + +  P RR+DLK YPR  + FA LYFTGSD+FNRSMR +A   KG+SLTD+ +       G K       +IC DE+ +F AL L YK P ERN
Sbjct:  264 INHNAHLTSVLDEL---IEYLAVE--KDEWRENSYKRMVSILKQLPAKVT--STAALRPQYGLNATGIAKIREILETGTLRKLEAKKADARLQVLRTFANIWGVGPSTATSLYS-QGFRSLDALRMR---QDEVLNPQQRIGLEHYADFLVKIPRAEVEDIQAIVKATVAMIHPTAVSV-TCGSYRRGKLQSGDVDILITDPLADECV--LLPDLLRELHKRAFLTDDLTTVTEHHIGG-CDSYMGVCRVDESRPFRRIDLKVYPRHLFGFAQLYFTGSDHFNRSMRAFA-KQKGYSLTDRGLTKVARAKGAKKLKQAPGLICPDEKDVFIALQLPYKRPEERN 591          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: EJY67523.1 (Helix-hairpin-helix motif family protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 224.2 bits (570), Expect = 1.600e-54
Identity = 136/338 (40.24%), Postives = 192/338 (56.80%), Query Frame = 0
Query:  413 LFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRG---FTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERN 748
            + ++L  +Y+    EA     R   Y R ++ L+S  +K    +V+QL+ +  +G  I K +QE++  G + R E L   + V      + +WGVGP  A+ LY+  GI SI +LR     +  +L E Q+IGLKYYE+++QRIPR E +E+   +R+TA  L P G     +  CGSYRRG   CGD+DIL    +G  S+   +  +V  LE++GFL + L   R    H  SE Y G+C L    P RR+D+K YP  QY FA LYFTGS  FNRSMR +A   KG+SL+D  + P +   G KV +  + V C  E  +FKAL L YK P+ER+
Sbjct:  287 IIKQLEKLYKYY--EAQDDKGRMHGYRRGLTFLRS--YKDPIYSVEQLESVPYLGHGILKKVQELIEEGSIKRFEFLSHDESVVVAELLEGVWGVGPKLAQKLYK-QGIRSIEDLR----QNQHLLTEMQKIGLKYYEDIKQRIPRDEVTEMLELIRKTALILIPNGQKLLKVDACGSYRRGKQSCGDIDILITKVDG-SSIHGFVKLLVLELEKQGFLKERLGGLRFS--HTGSEGYMGMCQLKPDLPFRRIDIKAYPLSQYGFAQLYFTGSGNFNRSMRLFA-QKKGYSLSDYGLMPVIRVKGEKVAEF-ESVPCETEEDVFKALNLDYKPPYERD 610          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: OQR81177.1 (DNA polymerase lambda-like protein [Achlya hypogyna])

HSP 1 Score: 223.0 bits (567), Expect = 3.500e-54
Identity = 140/340 (41.18%), Postives = 186/340 (54.71%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQ---KIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYK 742
            NLN HLT +FEEL    E L  E  +  +R+  Y R+VS+LK LP KV   +  + Q      G+ K     I+EIL  G L +LEA K    +     F  IWGVGPVTA++LY          L A       +LN+ QRIGL++Y +   +IPRAE  EIE  V+     L+PR     TCGSYRRG +  GDVDIL       E    L+  +++ L ++ FLTD LT   ++      +SY G+C + Q  P RR+DLK YPR  + FA+LYFTGSD+FNRSMR +A   KG+SLTD+ +       G +       + C DE+ +F AL L YK
Sbjct:  293 NLNTHLTSVFEEL---IEYLAVE--KDEWRENSYKRMVSILKQLPSKVTSADALRPQFGFNANGIAK-----IREILETGTLRKLEAKKSDLRLQTLRLFANIWGVGPVTAQSLYSQ----GYRSLEALAANGAAVLNDQQRIGLQHYADFLVKIPRAEVEEIEAVVKAAVAQLNPRA-ECVTCGSYRRGKAQSGDVDILVTDPTADECA--LLPDLLKHLHKQAFLTDDLTHV-YEHHTGGCDSYMGVCRVDQTRPFRRIDLKVYPRRLFGFAILYFTGSDHFNRSMRAFA-KQKGYSLTDRGLTKVARAKGVEKLKQAPSLTCPDEKDVFIALQLPYK 613          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_002503211.1 (predicted protein [Micromonas commoda] >ACO64469.1 predicted protein [Micromonas commoda])

HSP 1 Score: 221.9 bits (564), Expect = 7.800e-54
Identity = 143/402 (35.57%), Postives = 207/402 (51.49%), Query Frame = 0
Query:  382 GRKRLRGAVGRWGCMEASSDGIVNLNKHLTPLFEELAAIYE-MLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQL------QKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTE-------------GRESVGDLIWRVVRRLEEEGFLTDHLTS----------------TRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERN 748
            G+KR     G + C   S+   VNLN H+T   EELAAIYE +LG   A   ++ R + ++   ++ L F V +  V+QL              ++   I+E+L  G+L++LE LK    V A L    +WG+G  TAR L+  DG+ ++A+LRA     PG L+ NQ +GL++YEE ++RIPR E   +   V     ++ P G ++T  GSYRRG + CGDVD+L  P+E               ++V D++  V+ RL   G +TD L++                    +  D +E    +  +     HRR+D+KTY  ++ PFA+LYFTGS YFNRSMR WA   KG SL D+            VRD   R    DER +F+ LGL Y  P +R+
Sbjct:  355 GKKR-----GAFACQRPSTAAPVNLNPHITRPLEELAAIYEDVLGGTNA---YKARHHKQVAGAVERLDFVVTD--VEQLCDPPVTPAFAQKTSTVRDKIRELLATGKLAKLEELKRKPDVEAVLELSGVWGIGTETARKLHREDGVSTVAQLRALAARQPGKLSANQHVGLRFYEEFKERIPRDEVEALAGHVEDAVAAVCP-GCSVTVAGSYRRGKTSCGDVDVLLCPSEEFIRGGSQGAPGATVDTVEDILPAVLARLRTRGVVTDDLSTGTVSWMGVARLPDSRERLAPTTTDGAEGDGAVAVVTPKRLHRRMDIKTYTPDEMPFALLYFTGSGYFNRSMRTWADKAKGLSLHDRGFNLVRGNDMTAVRDAKFR----DERDVFEYLGLEYVPPEDRS 741          
The following BLAST results are available for this feature:
BLAST of NO08G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX95575.11.200e-5740.56DNA polymerase lambdalike protein putative, partia... [more]
CCA20232.11.500e-5740.56DNA polymerase lambdalike protein putative [Albugo... [more]
XP_008880156.12.000e-5733.39hypothetical protein H310_14139 [Aphanomyces invad... [more]
GAY05668.15.800e-5739.72DNA polymerase lambdalike protein putative, partia... [more]
GBG31176.11.100e-5538.52DNA polymerase lambda [Aurantiochytrium sp. FCC131... [more]
EJY70640.17.100e-5540.24Helix-hairpin-helix motif family protein (macronuc... [more]
XP_008613695.19.200e-5541.28hypothetical protein, variant [Saprolegnia diclina... [more]
EJY67523.11.600e-5440.24Helix-hairpin-helix motif family protein (macronuc... [more]
OQR81177.13.500e-5441.18DNA polymerase lambda-like protein [Achlya hypogyn... [more]
XP_002503211.17.800e-5435.57predicted protein [Micromonas commoda] >ACO64469.1... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL107nonsL107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR138ngnoR138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009057NSK009057Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00310.2NO08G00310.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G00310.1NO08G00310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|358185gene_3354Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100045g27gene4038Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00310.2NO08G00310.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G00310.1NO08G00310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00310 ID=NO08G00310|Name=NO08G00310|organism=Nannochloropsis oceanica|type=gene|length=4424bp
ATGGACGTAGAGGACGAAGCGCATCGGGTAGTGCAGCAAAAAATCGTCTT
TACCCGAATGGCCTATTCACGTCAGGTCTTCGAGGCTAGCATGgtatgtc
catatggggagcaaggccttaaaggggagggtatgggagagaaggacgtg
aaagggagtcacggcggcgcggggcgatggccggtgccgtaagatatagt
gagaacgtaggaggggtggaatactatcacggtttttgtggcacagcgct
cgatcgaccaccaccagcagccctcttttcttccaccctgctaccccttc
cctctcaccccctcacacgtgaacgtacactcaatgatttaacacagCGC
GGCGCCTCTTTGCGTGCCACCACTGCAGCTATGAGTGCCTTTGAAGCATG
GGTGGAAGAGGGTCACGCTAAGGGCAAGCCACCGTCCCTCGCCGACGTGT
GGAAAGAGGTGAAGGAGGCGGAGGAAGAACAGATGGAGAAGGGGAGCAGG
CGATGGCTTGGTCGGTTGGCAGCAGCTCCAGCAGCAACCGCAGGACCAAG
AGATTCAACAGTATCAGCACCATCAGTGGCATCGGCAGCTCCTTCTCGTC
CTCCTCCTCACATACCACATTCCCCTCTTCCGCTTGCAAGCAGATTACCC
CCTTCCCCTCCTTCTGTCCCTGCTGCTGCTGCCCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTTCTCCTCCTCCCTCTTTTGCAAGTGGTGGTGGAG
GCAACTCTCCTCTCTCCAATCAATCAGCTGCTGCTCTCTCTCCTCCTCCC
TCTTCGTCAGTCGCCGCTGGTTGTCATGCCCCTCCTTCTCCTCTCCCTCC
TTCCAAAGGCCGCCCACCTCACGCAGACCACGCGGCTCCGCCTTCCGCCT
TTCCTCCCCCCCTCCCTCCTCCTACTCCTCCCGAGACCCCGACGACGCTG
CGAGCGATGGGGCCCATTTGGATCGTGGAGAAAgtacggaggcagggagg
gaggcagggagggagggaaagacccgaggactcctgcatcttaacatcta
tcgtcgacctaattcttgcatccccccccctccttccttttcccctccat
ccattcccccatccctcaagTACGATCAGATCTCCACGAGGATTGCTAAG
CGTTGGCGGCAGGTGCTGGGGAAGCACGGGGCTCGgtgaggagggaggga
gggagggaggggaaagggtggtagggagggaaggaaggttatgtacatcg
cttttgcttgtccgtgcctaccatgtgacaagtggaggaaggaaaggagg
atagggagtgggaaaaaacggtaacgtatgaattgagctcttgttgtgac
gtaccctcaaaaatcagGTTTCACCCTCACTTTGTGCCGGGGAAGACGCG
CGTTGTCATCCTGCCGAGCAGGCTGAGTCGGGCGACCGTTAACAAGgtag
gcagttaggaggggaaggcgggaagatggacgatggacgtgagcgtagca
tttctttctatacattccaccacccctcctccctccctccctccgttccc
cctgcatctgcagCTTCTGCCATGTGACTGTCGAGACGTGCGCCTCTTGA
CTCAAGAGTGGGCGGTAGAGGCCATCAAGCGGGCCATTGCCCTGGGAGAG
GCGAAGACGAAGGAAGGAGGAGGGGAGGGAGGGAAGGAGGGAAGAAAAGA
AGGAGGGGGCCTGAGACCTCCCCCCTATGCGCAGTACTTGTTTGTGGACC
CCGCCGATTTGACGGCCCACGGGGCAGCTGCGGAGGAAGAGCAGGAGCAG
GCGAGGGGAGGGGGAAGGGAGGGGAAGGACAAGGGAAGGAAGCGTCTCCG
CGGGGCCGTTGGAAGGTGGGGGTGCATGGgtacgtggaccgcgatagttc
ttcctccctccctccctccctcccttccttctttccccccaagaggcctc
aggcgaaagtattgtgaaaaaacatctgacatgcccctctcgccctccct
ccctccctccctccctccctccctccccccctcccccccgaagAGGCCTC
CAGCGATGGCATCGTGAATTTGAACAAGCACCTGACGCCGCTCTTCGAGG
AGTTGGCAGCCATCTATGAGATGCTGGGGgtatgctgggagggagggagg
gaaggacggggggaagacggaagatcggatctggacgtgagagtttttga
atcctcccatcccatcccgtaaccttctaccccccgctccttccctccct
cccttcctccctcccttcctccctccctccctttcttctagAACGAGGCA
GCCCAAGGGCCTTTCCGGAAGCGGCAGTACGGTCGTCTCGTGTCCCTACT
CAAGAGTCTCCCCTTTAAGGTGGATGAAGGCAACGTGAAGCAACTCCAGA
AGATCAAGGgtaaggagggagggagggagggagggagggagggagggagg
gagggaaaaaaggagagagggcagaacagtcatgtcaagcccttcgtttc
tgacccatccctccctccctccctccctccctccctctctccctatctgt
ctgtctgtccagGTGTGGGCAAGTCCATCGCAAAAGACATTCAGGAAATT
CTGACACGGGGAAGGCTCTCGCGGTTGGAGGCTTTGAAGgtagggaggga
gggagggagggagggagggagagacaagagcgtatccacccccccacata
tgcaccttcataaactcacatgtttatgagtaataatgtgcatagacacc
attctaatccctctttctctaccacgtgtaatctcctcgtgatagATGAC
CCAGGGGGTGGGTGCACGTCTGGGCTTCCAGAAGATATGGGGCGTGGGTC
CTGTGACGGCCCGGGCGCTCTACGAGCACGACGGCATAGGCAGCATTGCT
GAGCTGCGGgtgaggacgcagggagggagggagggaaggagggagggaag
gtgaaggggggaggacgcgggccgtctctcctatatgtacaacatattat
ctgtgcaatatgcacacatccattcgcacgtcacctcccctccctcccct
ccctcccctcccttccttcccttccctccctccaagGCCCGCGTGGTCAC
TCACCCGGGTATCTTAAACGAGAATCAGCGCATCGGTCTCAAGTACTACG
AAGAACTTCAGCAACGCATCCCTCGGGCAGAAGCCAGCGAGATTGAACGA
CGCGTCCGACAGgcaagcctccgtcccccccgccctcccgcccttcctcc
ctccctccccctcttcatgatggggcagccattcacctgcctgtttcccc
tccctccctccctccctccctccgcccccccctccaccagACAGCCGAGT
CCCTAGATCCGCGAGGGTTCACCATGACGACCTGTGGGAGCTACCGGCGT
GGCGCGAGTCACTGCGGCGATGTCGACATCCTCTTTGCGCCCACTGAGgt
ttggagagaggaggggggggggggggggggagggagggcgggagggaggg
cgtgagggagggcggtgtcgacatcatctttgtgcctactaaggtttgga
gagagggggggagagggagggagggagggcgggagggcgggagggcggaa
aggagggaaaggaagggagacctagtatcaatcttcttaattgttattct
tatttaccatcactttccttaattttagacctaataaatgcctctgtatt
agatcccggagtctcaagttatactccttatcactctatcctcccctcgt
cgacagGGACGAGAGAGCGTGGGAGACCTCATCTGGAGGGTTGTTCGACG
CCTGGAGGAGGAAGGCTTCCTTACTGACCACCTTACAgtacgtccctccc
tccctccctccctccctccctccttccctccctccctccctccctccctc
cctctttcgcttctttttccattgactccgccaccaacccatcctcctcc
tctcatgccctccccccctcccttccttcccccccctagAGCACACGCCA
CGACTCAGTCCATGATTTCTCCGAATCCTATTTCGGAATCTGCTGCCTGG
GCCAGGGCTACCCCCACCGCCGACTCGACCTCAAGgtgctctttcccctc
cctccctccctccctccctccctcccttccttcctcaggtctacaaccac
ccttcatctcacacctcatcgacacctccctccctccctccctcccactc
ccttttcctcattccctccctccccccagACCTATCCCCGAGAGCAGTAT
CCTTTTGCCGTCCTCTACTTCACGGGCTCCGACTACTTCAACCGCTCCAT
GCGCTGCTGGGCCATCAACCACAAGGGGGTAAGGCAGGCAGGGAGGGAGG
GAGAGAGGGAGGGAGGAAGAGAAAGAAGGAGGGAGGGGTGGGGAGGTTGG
GGAAGAGGATAGGACATGGGAGGG
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protein sequence of NO08G00310.2

>NO08G00310.2-protein ID=NO08G00310.2-protein|Name=NO08G00310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=726bp
MDVEDEAHRVVQQKIVFTRMAYSRQVFEASMRGASLRATTAAMSAFEAWV
EEGHAKGKPPSLADVWKEVKEAEEEQMEKGSRRWLGRLAAAPAATAGPRD
STVSAPSVASAAPSRPPPHIPHSPLPLASRLPPSPPSVPAAAAPPPPPPP
PPPPSPPPSFASGGGGNSPLSNQSAAALSPPPSSSVAAGCHAPPSPLPPS
KGRPPHADHAAPPSAFPPPLPPPTPPETPTTLRAMGPIWIVEKYDQISTR
IAKRWRQVLGKHGARFHPHFVPGKTRVVILPSRLSRATVNKLLPCDCRDV
RLLTQEWAVEAIKRAIALGEAKTKEGGGEGGKEGRKEGGGLRPPPYAQYL
FVDPADLTAHGAAAEEEQEQARGGGREGKDKGRKRLRGAVGRWGCMEASS
DGIVNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPF
KVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLG
FQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYE
ELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDI
LFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGI
CCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGVR
QAGREGEREGGRERRREGWGGWGRG*
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protein sequence of NO08G00310.1

>NO08G00310.1-protein ID=NO08G00310.1-protein|Name=NO08G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=855bp
MDVEDEAHRVVQQKIVFTRMAYSRQVFEASMRGASLRATTAAMSAFEAWV
EEGHAKGKPPSLADVWKEVKEAEEEQMEKGSRRWLGRLAAAPAATAGPRD
STVSAPSVASAAPSRPPPHIPHSPLPLASRLPPSPPSVPAAAAPPPPPPP
PPPPSPPPSFASGGGGNSPLSNQSAAALSPPPSSSVAAGCHAPPSPLPPS
KGRPPHADHAAPPSAFPPPLPPPTPPETPTTLRAMGPIWIVEKYDQISTR
IAKRWRQVLGKHGARFHPHFVPGKTRVVILPSRLSRATVNKLLPCDCRDV
RLLTQEWAVEAIKRAIALGEAKTKEGGGEGGKEGRKEGGGLRPPPYAQYL
FVDPADLTAHGAAAEEEQEQARGGGREGKDKGRKRLRGAVGRWGCMEASS
DGIVNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPF
KVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLG
FQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYE
ELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDI
LFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGI
CCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWS
LTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHD
AVMLEEEEGGKEGEGRGRGRLAVSLDELEEWEEKEEAEAQGRVVALEGEE
EEGKEGEEGWRGMEEEEEEEESRLDCEQVWSGGRRREGGREEGREGGKGY
GRRG*
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Synonyms
Publications