NO08G00310, NO08G00310 (gene) Nannochloropsis oceanica

Overview
NameNO08G00310
Unique NameNO08G00310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4424
Alignment locationchr8:119963..125871 -

Link to JBrowse

Properties
Property NameValue
DescriptionDna polymerase lambda
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:119963..125871 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029398PolB_thumb
IPR027421DNA_pol_X_lyase_dom
IPR028207DNA_pol_B_palm_palm
IPR010996DNA_pol_b-like_N
IPR018944DNA_pol_lambd_fingers_domain
IPR002054DNA-dir_DNA_pol_X
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0034061DNA polymerase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Homology
BLAST of NO08G00310 vs. NCBI_GenBank
Match: EWM26472.1 (dna polymerase lambda [Nannochloropsis gaditana])

HSP 1 Score: 361.7 bits (927), Expect = 6.300e-96
Identity = 187/374 (50.00%), Postives = 233/374 (62.30%), Query Frame = 0
Query:  382 GRKRLRGAVGRWGCMEASSDGIVNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLE 756
            G +  +    +W C EAS  G++N N HLT   +EL AIY+MLG++ A G +R+ QY R V +L+ LPF +++ N++ L+K +G+G S+ KDI EIL  GRLSRLEALK                                      ARV +HPGILNENQR+GL+YYEE Q+RIPR+E  +IE RVR+  E +  RGF                                  + R++  LE+EGFLTDHLT    D+  D S+SYFG+C LG GY HRRLDLK Y R+QYPFAVLYFTGSD+FNRSMRCWAI HKGWSLTDKSMGPA+W+ G+KV D+G R++C +ER IF  LGLAYK PWERNTHDAV LE
Sbjct:   82 GGRHRQSETAKWTCREASRAGLLNHNVHLTVFLDELIAIYDMLGSDIAGGRYRRAQYHRFVQILRGLPFAINKDNLRSLKKKRGIGSSMLKDIGEILEYGRLSRLEALK--------------------------------------ARVRSHPGILNENQRVGLRYYEEFQERIPRSEVRKIEERVRE--ERVQARGF----------------------------------LGRLILHLEKEGFLTDHLT----DATDDKSDSYFGVCRLGDGYLHRRLDLKVYSRQQYPFAVLYFTGSDHFNRSMRCWAIKHKGWSLTDKSMGPAVWERGKKVADIGPRIVCTEEREIFHRLGLAYKRPWERNTHDAVSLE 377          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_009831664.1 (hypothetical protein H257_07734 [Aphanomyces astaci] >ETV78945.1 hypothetical protein H257_07734 [Aphanomyces astaci])

HSP 1 Score: 246.9 bits (629), Expect = 2.300e-61
Identity = 148/343 (43.15%), Postives = 200/343 (58.31%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERN 748
            N+N HLT  FE+L     +  +E     +R+  Y R+ S+LK LP +V   +   LQ   G+  +    I+EIL  G L +LEA +    +   L F  IWGVGP TA  LY   G  ++ +LRA+      +L  NQRIGLK+Y++   +IPR+E  EIE  V+Q   SL PR   + TCGSYRRG S  GDVD+L   ++  +   +++ R++  L   GFLTD LT+     +   S+SY G+C LG+G  +RR+D+K YPR  + FA LYFTGSD+FNRSMR +A   KG+SLTDK +  A    G K    G  VIC DE+ +F AL L YK P ERN
Sbjct:  315 NVNAHLTGPFEQLVEYLHVENDE-----WRENSYKRICSILKQLPNRVTSAH--SLQPQHGLNSTGIAKIREILETGTLRKLEAKRSDPRLQVLLQFSNIWGVGPATATNLY-RAGYRTLDDLRAK---QDEVLTHNQRIGLKHYDDFLAKIPRSEVQEIESVVKQHVHSLLPRAVAI-TCGSYRRGKSQSGDVDVLI--SDPTQDDCNIMPRLLADLHAIGFLTDDLTTVEEHKIGG-SDSYMGVCRLGEGRRYRRIDIKVYPRNLFGFAQLYFTGSDHFNRSMRAFA-KMKGYSLTDKGLYKATRSKGVKKLKQGPNVICRDEKDVFLALQLPYKRPDERN 641          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_024579919.1 (dna polymerase lambda-like protein [Plasmopara halstedii] >CEG43550.1 dna polymerase lambda-like protein [Plasmopara halstedii])

HSP 1 Score: 240.0 bits (611), Expect = 2.800e-59
Identity = 143/354 (40.40%), Postives = 205/354 (57.91%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EEL   +++      +  +R+  Y ++VS LK+   +V    VK ++ ++ V   +   I EIL  GRLS+L+  K    + A +   ++WGVGPVTA  LY   G  S+A+LR        +L   Q+IG+K+YE++  +IPRAE  +IE+ V      + P    +  CGSYRRG    GD DIL   T+      D++  +++RL   GFLTD LT  +    +   ++Y G+C L +  PHRRLD+K YPR  + FA+LYFTGSD+FNRSMR +A N  GWSL+D+++   +  +  KVR +GD V+C  E  +F ALGL YK P ERN  D   +EE+E
Sbjct:  706 NLNAHLTDPLEELMEFFDV-----ERDVWRQYMYKKVVSSLKATRHRV--CTVKDIKDMRWVKGRLRDKIIEILETGRLSKLDVKKSNPRLCALVEIARVWGVGPVTAAKLY-GQGYKSVADLRKPAAAE--VLTAQQQIGVKHYEDILLKIPRAEVHQIEQIVSDEVHKMIPNAIAV-ACGSYRRGKLSSGDCDILV--TDPDADTCDILPDLLKRLHASGFLTDDLTHFQKQK-NGGCDTYMGVCRLSKNLPHRRLDIKVYPRLFFGFAILYFTGSDHFNRSMRLYA-NKNGWSLSDRALTRVVRVNTTKVR-LGDSVVCESEVDVFIALGLEYKDPTERNCFDIKFIEEDE 1043          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_012749981.1 (hypothetical protein SAMD00019534_102760 [Acytostelium subglobosum LB1] >GAM27101.1 hypothetical protein SAMD00019534_102760 [Acytostelium subglobosum LB1])

HSP 1 Score: 238.0 bits (606), Expect = 1.100e-58
Identity = 141/349 (40.40%), Postives = 201/349 (57.59%), Query Frame = 0
Query:  399 SSDGIVNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLE-ALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWER 747
            ++ G VN N+HLT + E+L ++ E  G+      +R+  Y + VS+L++LPF+V++   KQ+  I+G+G  I   I+EIL  G L ++E AL  T  + +R    KI G GP T R  +   GI S+ +L+         L   QRIGLKYY++ Q RIPR E   I   ++  A+ +D +   M  CGS+RR    CGD+DILF   +G E +   +W++V+RLE    LTDHLT  + D     S+ Y G+C  G    HRR+D +T PRE++P+A+LYFTGSD+FNRSMR WA    G+SL+   +         +V+  GD +    ER IF  LGL YK P ER
Sbjct:  173 NNGGRVNHNEHLTSVMEKLQSLSEAEGDH-----WRQYAYKKAVSILRALPFRVND--AKQISHIRGIGAKILDKIREILHTGTLLKVERALADTTNI-SRETLSKIHGAGPETVRK-WIAKGIDSLDKLQQAASKDQSFLTWQQRIGLKYYDDFQLRIPRDEVQAIADNIQAVAKEID-KDIIMQVCGSFRRSKPDCGDIDILFTQVKG-EILKGFLWQLVKRLESNSLLTDHLTHVKSD-----SDKYMGVCRHGPNGKHRRIDFQTIPREEWPYALLYFTGSDHFNRSMRLWA-RKNGFSLSSSHLVRRWGTGDNEVK--GDPIEAATERDIFLLLGLEYKEPHER 502          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: OQS04583.1 (DNA polymerase lambda [Thraustotheca clavata])

HSP 1 Score: 237.7 bits (605), Expect = 1.400e-58
Identity = 143/356 (40.17%), Postives = 201/356 (56.46%), Query Frame = 0
Query:  404 VNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFS--ESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEE 758
            VN N H+T + EEL A   +  +E     +R+  Y R+VS+LK LP+KV+  +   ++   G+  +    I+EIL  G L +LEA +    +     F  IWGVGP TA++LY   G  S+ +L+ +  T   IL E QRIGL YY++   +IPR E  EIE  V++  + L+PR   + TCGSYRRG +  GDVDIL       E    L+  ++++L    FLTD LT   H   H     +SY G+C + Q  PHRR+DLK YPR  + FA+LYFTGSD+FNRSMR +A   KG+SLTD+ +       G K       +IC DE  +F AL L YK  W    ++++ ++ E
Sbjct:  368 VNQNTHITNVLEELIAFLAVEKDE-----WRENSYKRIVSILKQLPYKVN--STDDIKPQFGLNTNGIAKIREILETGSLRKLEAKRSDPTLSVLREFSNIWGVGPATAKSLY-GQGFRSLKQLKEKEAT---ILTEQQRIGLAYYDDFLMKIPREEVEEIEAIVKEQVKQLNPRAIAI-TCGSYRRGKTQSGDVDILITDPGADECF--LLPDLLKQLHTASFLTDDLT---HVYEHHLGGCDSYMGVCRVNQSRPHRRIDLKVYPRNVFGFALLYFTGSDHFNRSMRAYA-KQKGYSLTDRGLTKVARAKGIKKLKQASSLICPDEMDVFIALQLPYKLEWLLLCYNSISVQLE 705          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: ETI48970.1 (hypothetical protein F443_07072 [Phytophthora parasitica P1569] >ETK88816.1 hypothetical protein L915_06972 [Phytophthora parasitica] >ETL42211.1 hypothetical protein L916_06922 [Phytophthora parasitica] >ETL95384.1 hypothetical protein L917_06792 [Phytophthora parasitica] >ETM48578.1 hypothetical protein L914_06888 [Phytophthora parasitica] >ETO77700.1 hypothetical protein F444_07141 [Phytophthora parasitica P1976] >ETP18725.1 hypothetical protein F441_07085 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 236.5 bits (602), Expect = 3.100e-58
Identity = 141/354 (39.83%), Postives = 202/354 (57.06%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EE+    ++      +  +R+  Y ++VS LK++  +V   +VK  + +  V   +   + EIL  GRL++L+A K    + A +   +IWGVGPVTA  LY   G  S+A+LR        +L   Q+IG+K+YE+   +IPRAE  +IE+ V      + P    +  CGSYRRG    GD D+L   T       D++  +++RL   GFLTD LT           ++Y G+C + +  P+RRLD+K YPR  + FA+LYFTGSD+FNRSMR +A N  GWSL+D+++   +  +G KVR +GD VIC  E  +F ALGL YK P ERN  D   +EE+E
Sbjct:  281 NLNAHLTDPLEEMMEFLDV-----ERDIWRQYMYKKVVSSLKAMRHRV--CSVKDFKDMHWVKGRLRDKVIEILETGRLAKLDAKKSNPRLRALVEIARIWGVGPVTAAKLY-GQGYKSVADLRKPEAA--AVLTAQQQIGVKHYEDFLTKIPRAEVQQIEQSVVDEVHKMIPNAIAL-ACGSYRRGKLSSGDCDVLV--TNPDADTCDILPELLKRLHASGFLTDDLTHFLKQKTGG-CDTYMGVCRVSEDLPYRRLDIKIYPRHFFGFAMLYFTGSDHFNRSMRLFA-NKNGWSLSDRALTRVMRVNGTKVR-LGDSVICESEVDVFIALGLEYKDPTERNCFDIKFIEEDE 618          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_008903687.1 (hypothetical protein PPTG_10157 [Phytophthora parasitica INRA-310] >ETN11209.1 hypothetical protein PPTG_10157 [Phytophthora parasitica INRA-310])

HSP 1 Score: 236.5 bits (602), Expect = 3.100e-58
Identity = 141/354 (39.83%), Postives = 202/354 (57.06%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EE+    ++      +  +R+  Y ++VS LK++  +V   +VK  + +  V   +   + EIL  GRL++L+A K    + A +   +IWGVGPVTA  LY   G  S+A+LR        +L   Q+IG+K+YE+   +IPRAE  +IE+ V      + P    +  CGSYRRG    GD D+L   T       D++  +++RL   GFLTD LT           ++Y G+C + +  P+RRLD+K YPR  + FA+LYFTGSD+FNRSMR +A N  GWSL+D+++   +  +G KVR +GD VIC  E  +F ALGL YK P ERN  D   +EE+E
Sbjct:  281 NLNAHLTDPLEEMMEFLDV-----ERDIWRQYMYKKVVSSLKAMRHRV--CSVKDFKDMHWVKGRLRDKVIEILETGRLAKLDAKKSNPRLRALVEIARIWGVGPVTAAKLY-GQGYKSVADLRKPEAA--AVLTAQQQIGVKHYEDFLTKIPRAEVQQIEQSVVDEVHKMIPNAIAL-ACGSYRRGKLSSGDCDVLV--TNPDADTCDILPELLKRLHASGFLTDDLTHFLKQKTGG-CDTYMGVCRVSEDLPYRRLDIKIYPRHFFGFAMLYFTGSDHFNRSMRLFA-NKNGWSLSDRALTRVMRVNGTKVR-LGDSVICESEVDVFIALGLEYKDPTERNCFDIKFIEEDE 618          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: ETP46648.1 (hypothetical protein F442_07139 [Phytophthora parasitica P10297])

HSP 1 Score: 236.5 bits (602), Expect = 3.100e-58
Identity = 141/354 (39.83%), Postives = 202/354 (57.06%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EE+    ++      +  +R+  Y ++VS LK++  +V   +VK  + +  V   +   + EIL  GRL++L+A K    + A +   +IWGVGPVTA  LY   G  S+A+LR        +L   Q+IG+K+YE+   +IPRAE  +IE+ V      + P    +  CGSYRRG    GD D+L   T       D++  +++RL   GFLTD LT           ++Y G+C + +  P+RRLD+K YPR  + FA+LYFTGSD+FNRSMR +A N  GWSL+D+++   +  +G KVR +GD VIC  E  +F ALGL YK P ERN  D   +EE+E
Sbjct:  281 NLNAHLTDPLEEMMEFLDV-----ERDIWRQYMYKKVVSSLKAMRHRV--CSVKDFKDMHWVKGRLRDKVIEILETGRLAKLDAKKSNPRLRALVEIARIWGVGPVTAAKLY-GQGYKSVADLRKPEAA--AVLTAQQQIGVKHYEDFLTKIPRAEVQQIEQSVVDEVHKMIPNAIAL-ACGSYRRGKLSSGDCDVLV--TNPDADTCDILPELLKRLHASGFLTDDLTHFLKQKTGG-CDTYMGVCRVSEDLPYRRLDIKIYPRHFFGFAMLYFTGSDHFNRSMRLFA-NKNGWSLSDRALTRVMRVNGTKVR-LGDSVICESEVDVFIALGLEYKDPTERNCFDIKFIEEDE 618          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: KUF80870.1 (DNA polymerase lambda [Phytophthora nicotianae])

HSP 1 Score: 236.5 bits (602), Expect = 3.100e-58
Identity = 141/354 (39.83%), Postives = 202/354 (57.06%), Query Frame = 0
Query:  405 NLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPFKVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLGFQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVMLEEEE 759
            NLN HLT   EE+    ++      +  +R+  Y ++VS LK++  +V   +VK  + +  V   +   + EIL  GRL++L+A K    + A +   +IWGVGPVTA  LY   G  S+A+LR        +L   Q+IG+K+YE+   +IPRAE  +IE+ V      + P    +  CGSYRRG    GD D+L   T       D++  +++RL   GFLTD LT           ++Y G+C + +  P+RRLD+K YPR  + FA+LYFTGSD+FNRSMR +A N  GWSL+D+++   +  +G KVR +GD VIC  E  +F ALGL YK P ERN  D   +EE+E
Sbjct:  281 NLNAHLTDPLEEMMEFLDV-----ERDIWRQYMYKKVVSSLKAMRHRV--CSVKDFKDMHWVKGRLRDKVIEILETGRLAKLDAKKSNPRLRALVEIARIWGVGPVTAAKLY-GQGYKSVADLRKPEAA--AVLTAQQQIGVKHYEDFLTKIPRAEVQQIEQSVVDEVHKMIPNAIAL-ACGSYRRGKLSSGDCDVLV--TNPDADTCDILPELLKRLHASGFLTDDLTHFLKQKTGG-CDTYMGVCRVSEDLPYRRLDIKIYPRHFFGFAMLYFTGSDHFNRSMRLFA-NKNGWSLSDRALTRVMRVNGTKVR-LGDSVICESEVDVFIALGLEYKDPTERNCFDIKFIEEDE 618          
BLAST of NO08G00310 vs. NCBI_GenBank
Match: XP_005854752.1 (DNA polymerase lambda subunit, partial [Nannochloropsis gaditana CCMP526] >EKU21612.1 DNA polymerase lambda subunit, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 235.0 bits (598), Expect = 8.900e-58
Identity = 126/253 (49.80%), Postives = 155/253 (61.26%), Query Frame = 0
Query:  523 SIAELRARVVTHPGILNENQRIGLKYYEELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDILFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGICCLGQGYPHRRLDLK-----------------TYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWSLTDKSMGPALWKH----GRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHDAVML 755
            S   L+ARV +HPGILNENQR+GL+YYEE Q+RIPR+E  +IE RVR+  E+L P  F +TTCGSYRRGASHCGDVDIL AP   R      + R++  LE+EGFLTDHLT    D+  D S+SYFG+C LG GY HRRLDLK                   P   + F  ++ +      R  R         SL + S  PA++      G+KV D+G R++C +ER IF  LGLAYK PWERNTHDAV L
Sbjct:   41 SAPPLKARVRSHPGILNENQRVGLRYYEEFQERIPRSEVRKIEERVREATEALYPGVFMLTTCGSYRRGASHCGDVDILLAPVSERVQARGFLGRLILHLEKEGFLTDHLT----DATDDKSDSYFGVCRLGDGYLHRRLDLKWSLTDKSMGPAVWERGTAAPPTPWSFRPVFPSILTRLTRPFRT--------SLLELSSHPAIFPFGDSVGKKVADIGPRIVCTEEREIFHRLGLAYKRPWERNTHDAVSL 281          
The following BLAST results are available for this feature:
BLAST of NO08G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26472.16.300e-9650.00dna polymerase lambda [Nannochloropsis gaditana][more]
XP_009831664.12.300e-6143.15hypothetical protein H257_07734 [Aphanomyces astac... [more]
XP_024579919.12.800e-5940.40dna polymerase lambda-like protein [Plasmopara hal... [more]
XP_012749981.11.100e-5840.40hypothetical protein SAMD00019534_102760 [Acytoste... [more]
OQS04583.11.400e-5840.17DNA polymerase lambda [Thraustotheca clavata][more]
ETI48970.13.100e-5839.83hypothetical protein F443_07072 [Phytophthora para... [more]
XP_008903687.13.100e-5839.83hypothetical protein PPTG_10157 [Phytophthora para... [more]
ETP46648.13.100e-5839.83hypothetical protein F442_07139 [Phytophthora para... [more]
KUF80870.13.100e-5839.83DNA polymerase lambda [Phytophthora nicotianae][more]
XP_005854752.18.900e-5849.80DNA polymerase lambda subunit, partial [Nannochlor... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL107nonsL107Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR138ngnoR138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009057NSK009057Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00310.2NO08G00310.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G00310.1NO08G00310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|358185gene_3354Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100045g27gene4038Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00310.2NO08G00310.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G00310.1NO08G00310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00310 ID=NO08G00310|Name=NO08G00310|organism=Nannochloropsis oceanica|type=gene|length=4424bp
ATGGACGTAGAGGACGAAGCGCATCGGGTAGTGCAGCAAAAAATCGTCTT
TACCCGAATGGCCTATTCACGTCAGGTCTTCGAGGCTAGCATGgtatgtc
catatggggagcaaggccttaaaggggagggtatgggagagaaggacgtg
aaagggagtcacggcggcgcggggcgatggccggtgccgtaagatatagt
gagaacgtaggaggggtggaatactatcacggtttttgtggcacagcgct
cgatcgaccaccaccagcagccctcttttcttccaccctgctaccccttc
cctctcaccccctcacacgtgaacgtacactcaatgatttaacacagCGC
GGCGCCTCTTTGCGTGCCACCACTGCAGCTATGAGTGCCTTTGAAGCATG
GGTGGAAGAGGGTCACGCTAAGGGCAAGCCACCGTCCCTCGCCGACGTGT
GGAAAGAGGTGAAGGAGGCGGAGGAAGAACAGATGGAGAAGGGGAGCAGG
CGATGGCTTGGTCGGTTGGCAGCAGCTCCAGCAGCAACCGCAGGACCAAG
AGATTCAACAGTATCAGCACCATCAGTGGCATCGGCAGCTCCTTCTCGTC
CTCCTCCTCACATACCACATTCCCCTCTTCCGCTTGCAAGCAGATTACCC
CCTTCCCCTCCTTCTGTCCCTGCTGCTGCTGCCCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTTCTCCTCCTCCCTCTTTTGCAAGTGGTGGTGGAG
GCAACTCTCCTCTCTCCAATCAATCAGCTGCTGCTCTCTCTCCTCCTCCC
TCTTCGTCAGTCGCCGCTGGTTGTCATGCCCCTCCTTCTCCTCTCCCTCC
TTCCAAAGGCCGCCCACCTCACGCAGACCACGCGGCTCCGCCTTCCGCCT
TTCCTCCCCCCCTCCCTCCTCCTACTCCTCCCGAGACCCCGACGACGCTG
CGAGCGATGGGGCCCATTTGGATCGTGGAGAAAgtacggaggcagggagg
gaggcagggagggagggaaagacccgaggactcctgcatcttaacatcta
tcgtcgacctaattcttgcatccccccccctccttccttttcccctccat
ccattcccccatccctcaagTACGATCAGATCTCCACGAGGATTGCTAAG
CGTTGGCGGCAGGTGCTGGGGAAGCACGGGGCTCGgtgaggagggaggga
gggagggaggggaaagggtggtagggagggaaggaaggttatgtacatcg
cttttgcttgtccgtgcctaccatgtgacaagtggaggaaggaaaggagg
atagggagtgggaaaaaacggtaacgtatgaattgagctcttgttgtgac
gtaccctcaaaaatcagGTTTCACCCTCACTTTGTGCCGGGGAAGACGCG
CGTTGTCATCCTGCCGAGCAGGCTGAGTCGGGCGACCGTTAACAAGgtag
gcagttaggaggggaaggcgggaagatggacgatggacgtgagcgtagca
tttctttctatacattccaccacccctcctccctccctccctccgttccc
cctgcatctgcagCTTCTGCCATGTGACTGTCGAGACGTGCGCCTCTTGA
CTCAAGAGTGGGCGGTAGAGGCCATCAAGCGGGCCATTGCCCTGGGAGAG
GCGAAGACGAAGGAAGGAGGAGGGGAGGGAGGGAAGGAGGGAAGAAAAGA
AGGAGGGGGCCTGAGACCTCCCCCCTATGCGCAGTACTTGTTTGTGGACC
CCGCCGATTTGACGGCCCACGGGGCAGCTGCGGAGGAAGAGCAGGAGCAG
GCGAGGGGAGGGGGAAGGGAGGGGAAGGACAAGGGAAGGAAGCGTCTCCG
CGGGGCCGTTGGAAGGTGGGGGTGCATGGgtacgtggaccgcgatagttc
ttcctccctccctccctccctcccttccttctttccccccaagaggcctc
aggcgaaagtattgtgaaaaaacatctgacatgcccctctcgccctccct
ccctccctccctccctccctccctccccccctcccccccgaagAGGCCTC
CAGCGATGGCATCGTGAATTTGAACAAGCACCTGACGCCGCTCTTCGAGG
AGTTGGCAGCCATCTATGAGATGCTGGGGgtatgctgggagggagggagg
gaaggacggggggaagacggaagatcggatctggacgtgagagtttttga
atcctcccatcccatcccgtaaccttctaccccccgctccttccctccct
cccttcctccctcccttcctccctccctccctttcttctagAACGAGGCA
GCCCAAGGGCCTTTCCGGAAGCGGCAGTACGGTCGTCTCGTGTCCCTACT
CAAGAGTCTCCCCTTTAAGGTGGATGAAGGCAACGTGAAGCAACTCCAGA
AGATCAAGGgtaaggagggagggagggagggagggagggagggagggagg
gagggaaaaaaggagagagggcagaacagtcatgtcaagcccttcgtttc
tgacccatccctccctccctccctccctccctccctctctccctatctgt
ctgtctgtccagGTGTGGGCAAGTCCATCGCAAAAGACATTCAGGAAATT
CTGACACGGGGAAGGCTCTCGCGGTTGGAGGCTTTGAAGgtagggaggga
gggagggagggagggagggagagacaagagcgtatccacccccccacata
tgcaccttcataaactcacatgtttatgagtaataatgtgcatagacacc
attctaatccctctttctctaccacgtgtaatctcctcgtgatagATGAC
CCAGGGGGTGGGTGCACGTCTGGGCTTCCAGAAGATATGGGGCGTGGGTC
CTGTGACGGCCCGGGCGCTCTACGAGCACGACGGCATAGGCAGCATTGCT
GAGCTGCGGgtgaggacgcagggagggagggagggaaggagggagggaag
gtgaaggggggaggacgcgggccgtctctcctatatgtacaacatattat
ctgtgcaatatgcacacatccattcgcacgtcacctcccctccctcccct
ccctcccctcccttccttcccttccctccctccaagGCCCGCGTGGTCAC
TCACCCGGGTATCTTAAACGAGAATCAGCGCATCGGTCTCAAGTACTACG
AAGAACTTCAGCAACGCATCCCTCGGGCAGAAGCCAGCGAGATTGAACGA
CGCGTCCGACAGgcaagcctccgtcccccccgccctcccgcccttcctcc
ctccctccccctcttcatgatggggcagccattcacctgcctgtttcccc
tccctccctccctccctccctccgcccccccctccaccagACAGCCGAGT
CCCTAGATCCGCGAGGGTTCACCATGACGACCTGTGGGAGCTACCGGCGT
GGCGCGAGTCACTGCGGCGATGTCGACATCCTCTTTGCGCCCACTGAGgt
ttggagagaggaggggggggggggggggggagggagggcgggagggaggg
cgtgagggagggcggtgtcgacatcatctttgtgcctactaaggtttgga
gagagggggggagagggagggagggagggcgggagggcgggagggcggaa
aggagggaaaggaagggagacctagtatcaatcttcttaattgttattct
tatttaccatcactttccttaattttagacctaataaatgcctctgtatt
agatcccggagtctcaagttatactccttatcactctatcctcccctcgt
cgacagGGACGAGAGAGCGTGGGAGACCTCATCTGGAGGGTTGTTCGACG
CCTGGAGGAGGAAGGCTTCCTTACTGACCACCTTACAgtacgtccctccc
tccctccctccctccctccctccttccctccctccctccctccctccctc
cctctttcgcttctttttccattgactccgccaccaacccatcctcctcc
tctcatgccctccccccctcccttccttcccccccctagAGCACACGCCA
CGACTCAGTCCATGATTTCTCCGAATCCTATTTCGGAATCTGCTGCCTGG
GCCAGGGCTACCCCCACCGCCGACTCGACCTCAAGgtgctctttcccctc
cctccctccctccctccctccctcccttccttcctcaggtctacaaccac
ccttcatctcacacctcatcgacacctccctccctccctccctcccactc
ccttttcctcattccctccctccccccagACCTATCCCCGAGAGCAGTAT
CCTTTTGCCGTCCTCTACTTCACGGGCTCCGACTACTTCAACCGCTCCAT
GCGCTGCTGGGCCATCAACCACAAGGGGGTAAGGCAGGCAGGGAGGGAGG
GAGAGAGGGAGGGAGGAAGAGAAAGAAGGAGGGAGGGGTGGGGAGGTTGG
GGAAGAGGATAGGACATGGGAGGG
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protein sequence of NO08G00310.2

>NO08G00310.2-protein ID=NO08G00310.2-protein|Name=NO08G00310.2|organism=Nannochloropsis oceanica|type=polypeptide|length=726bp
MDVEDEAHRVVQQKIVFTRMAYSRQVFEASMRGASLRATTAAMSAFEAWV
EEGHAKGKPPSLADVWKEVKEAEEEQMEKGSRRWLGRLAAAPAATAGPRD
STVSAPSVASAAPSRPPPHIPHSPLPLASRLPPSPPSVPAAAAPPPPPPP
PPPPSPPPSFASGGGGNSPLSNQSAAALSPPPSSSVAAGCHAPPSPLPPS
KGRPPHADHAAPPSAFPPPLPPPTPPETPTTLRAMGPIWIVEKYDQISTR
IAKRWRQVLGKHGARFHPHFVPGKTRVVILPSRLSRATVNKLLPCDCRDV
RLLTQEWAVEAIKRAIALGEAKTKEGGGEGGKEGRKEGGGLRPPPYAQYL
FVDPADLTAHGAAAEEEQEQARGGGREGKDKGRKRLRGAVGRWGCMEASS
DGIVNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPF
KVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLG
FQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYE
ELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDI
LFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGI
CCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGVR
QAGREGEREGGRERRREGWGGWGRG*
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protein sequence of NO08G00310.1

>NO08G00310.1-protein ID=NO08G00310.1-protein|Name=NO08G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=855bp
MDVEDEAHRVVQQKIVFTRMAYSRQVFEASMRGASLRATTAAMSAFEAWV
EEGHAKGKPPSLADVWKEVKEAEEEQMEKGSRRWLGRLAAAPAATAGPRD
STVSAPSVASAAPSRPPPHIPHSPLPLASRLPPSPPSVPAAAAPPPPPPP
PPPPSPPPSFASGGGGNSPLSNQSAAALSPPPSSSVAAGCHAPPSPLPPS
KGRPPHADHAAPPSAFPPPLPPPTPPETPTTLRAMGPIWIVEKYDQISTR
IAKRWRQVLGKHGARFHPHFVPGKTRVVILPSRLSRATVNKLLPCDCRDV
RLLTQEWAVEAIKRAIALGEAKTKEGGGEGGKEGRKEGGGLRPPPYAQYL
FVDPADLTAHGAAAEEEQEQARGGGREGKDKGRKRLRGAVGRWGCMEASS
DGIVNLNKHLTPLFEELAAIYEMLGNEAAQGPFRKRQYGRLVSLLKSLPF
KVDEGNVKQLQKIKGVGKSIAKDIQEILTRGRLSRLEALKMTQGVGARLG
FQKIWGVGPVTARALYEHDGIGSIAELRARVVTHPGILNENQRIGLKYYE
ELQQRIPRAEASEIERRVRQTAESLDPRGFTMTTCGSYRRGASHCGDVDI
LFAPTEGRESVGDLIWRVVRRLEEEGFLTDHLTSTRHDSVHDFSESYFGI
CCLGQGYPHRRLDLKTYPREQYPFAVLYFTGSDYFNRSMRCWAINHKGWS
LTDKSMGPALWKHGRKVRDVGDRVICHDERGIFKALGLAYKHPWERNTHD
AVMLEEEEGGKEGEGRGRGRLAVSLDELEEWEEKEEAEAQGRVVALEGEE
EEGKEGEEGWRGMEEEEEEEESRLDCEQVWSGGRRREGGREEGREGGKGY
GRRG*
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