NO08G00290, NO08G00290 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_010023847.1 (PREDICTED: pre-mRNA-processing factor 19 homolog 1 [Eucalyptus grandis] >KCW60227.1 hypothetical protein EUGRSUZ_H02940 [Eucalyptus grandis]) HSP 1 Score: 341.3 bits (874), Expect = 5.500e-90 Identity = 215/510 (42.16%), Postives = 293/510 (57.45%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPV--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGEGVQAVAFDPSGQYLGVAAGTGIKVY----LAKAWSPVAEFNDHS 505 M+C ISGEV EEPV+S SG V+E+R+I +Y+ K P +GE LT DD++ VK K+V+PRP+ A S+PGLL++FQNEWD+LML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + ++ AG P GIS +++A+IT LS+ RKKR +P L E++ ++T + + LH T KPG+ +LD+ ++ TGG+D AV+FDR + ++ L GH KKVT+V F D ++LTGSADKTV++W+ S SY L H ++V A+ + AT +YFA+AS D TW ++ S+G CL V + + GY AFHPDG++LGTGT+ + V++WDVKTQANV TF HTG + XXXXXXXXXXXXXX D G +V FD SG YLG+ AG+ I+VY + W+ V F D S Sbjct: 1 MNCSISGEVPEEPVVSTKSGHVFERRLIERYVSDYGKCPVSGEPLTMDDVLPVKMGKIVKPRPLQAASIPGLLSIFQNEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLALAERQIPMTASSDIAVNAPAMSNGRKASLDEEPGYAGKKMRP-GISASIIAEITDCNLALSQQRKKRQIPSTLAPVEDLERYTQLSSYPLHKTGKPGITSLDICH-SKDIIATGGIDTSAVLFDRSSGQIMSTLSGHSKKVTSVNFDAQGD---MVLTGSADKTVRIWQ--------------------GSEDGSYNCRHILKDHTAEVQAITVHATNNYFATASLDNTWCFYEFSTGLCLTQVEGASGSEGYTSAAFHPDGLILGTGTSNADVKIWDVKTQANVTTFSGHTGAITAISFSENGYFLATAAQDGXXXXXXXXXXXXXXXXXYDKDTGTNSVEFDHSGCYLGL-AGSDIRVYQVASVKSEWNCVKTFPDLS 484
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_006420336.1 (pre-mRNA-processing factor 19 homolog 2 [Citrus clementina] >XP_006489640.1 PREDICTED: pre-mRNA-processing factor 19 homolog 2 [Citrus sinensis] >ESR33576.1 hypothetical protein CICLE_v10004724mg [Citrus clementina] >KDO43334.1 hypothetical protein CISIN_1g009763mg [Citrus sinensis] >GAY46646.1 hypothetical protein CUMW_098660 [Citrus unshiu]) HSP 1 Score: 340.9 bits (873), Expect = 7.100e-90 Identity = 204/513 (39.77%), Postives = 280/513 (54.58%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAG---GYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPV--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGEGVQAVAFDPSGQYLGVAAGTGIKVYLAKA----WSPVAEFNDHS 505 M+C ISGEV EEPV+S+ SG+++EKR+I ++I K P GE LT DD++ +K+ K+V+PRP+TA S+PG+L +FQNEWD LML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P L+T GI+ A++A++T LS+ RKKR +P L + + ++T + H LH TSKPG+++LD+ ++ TGG+D AV+FDR + +V L GH KKVT+V+F D L LTGSADKTV++W+ S +Y +L H ++V A+ + AT YF +AS D TW +D SSG CL V D G GY AFHPDG++LGTGT+ + V++WDVK+QANVA F+ H G V S D +V FD SG YL VA+ I+VY + W+ + F D S Sbjct: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHT--GITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIH-YSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD---LFLTGSADKTVRVWQ--------------------GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS-ADIRVYQVASVKADWNCIKTFPDLS 486
BLAST of NO08G00290 vs. NCBI_GenBank
Match: KDO43336.1 (hypothetical protein CISIN_1g009763mg [Citrus sinensis]) HSP 1 Score: 340.9 bits (873), Expect = 7.100e-90 Identity = 204/513 (39.77%), Postives = 280/513 (54.58%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAG---GYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPV--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGEGVQAVAFDPSGQYLGVAAGTGIKVYLAKA----WSPVAEFNDHS 505 M+C ISGEV EEPV+S+ SG+++EKR+I ++I K P GE LT DD++ +K+ K+V+PRP+TA S+PG+L +FQNEWD LML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P L+T GI+ A++A++T LS+ RKKR +P L + + ++T + H LH TSKPG+++LD+ ++ TGG+D AV+FDR + +V L GH KKVT+V+F D L LTGSADKTV++W+ S +Y +L H ++V A+ + AT YF +AS D TW +D SSG CL V D G GY AFHPDG++LGTGT+ + V++WDVK+QANVA F+ H G V S D +V FD SG YL VA+ I+VY + W+ + F D S Sbjct: 1 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDEDLGPAGKKLHT--GITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYTQLASHPLHKTSKPGIVSLDIH-YSKDVIATGGVDTNAVLFDRPSGQIVTTLSGHSKKVTSVKFVTEGD---LFLTGSADKTVRVWQ--------------------GSEDGNYDCKHTLKDHTAEVQAVTVHATNKYFVTASLDNTWCFYDLSSGICLTQVSDAGTDGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVAS-ADIRVYQVASVKADWNCIKTFPDLS 486
BLAST of NO08G00290 vs. NCBI_GenBank
Match: OMO86569.1 (hypothetical protein CCACVL1_09553 [Corchorus capsularis]) HSP 1 Score: 340.5 bits (872), Expect = 9.300e-90 Identity = 203/504 (40.28%), Postives = 288/504 (57.14%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+++ SG+++EKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ Q+ A E E P G GISD+++A++T LS+ RKKR +P L S + + ++T + H LH T+KPG+ +LD++ L ++ TGG+D AV+FDR + ++ L GH KK+T+V+F + ++L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA+F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVAKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLA--QAERQAPLPAVTANVSALSNGKRASENEEMGP--GGKKMRPGISDSIIAELTDCNAALSQQRKKRQIPPTLASVDALERYTQLSSHPLHKTNKPGITSLDIN-LSKDIVATGGVDSNAVLFDRTSGEILSTLSGHSKKITSVKFVAEHN---VVLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGVCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTDATVRIWDVKSRGNVASFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 472
BLAST of NO08G00290 vs. NCBI_GenBank
Match: OMO95357.1 (hypothetical protein COLO4_15958 [Corchorus olitorius]) HSP 1 Score: 340.5 bits (872), Expect = 9.300e-90 Identity = 204/504 (40.48%), Postives = 287/504 (56.94%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+++ SG+++EKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ Q+ A E E P G GISD ++A++T LS+ RKKR +P L S + + ++T + H LH T+KPG+ +LD+S L ++ TGG+D AV+FDR + ++ L GH KK+T+V+F + ++L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA+F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVAKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLA--QAERQAPLPAVTANVSALSNGKRASENEEMGP--GGKRMRPGISDNIIAELTDCNAALSQQRKKRQIPPTLASVDALERYTQLSSHPLHKTNKPGITSLDIS-LSKDIVATGGVDSNAVLFDRTSGEILSTLSGHSKKITSVKFVAEHN---VVLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGVCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTDATVRIWDVKSRGNVASFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 472
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_016715989.1 (PREDICTED: pre-mRNA-processing factor 19 homolog 1-like [Gossypium hirsutum]) HSP 1 Score: 340.1 bits (871), Expect = 1.200e-89 Identity = 203/509 (39.88%), Postives = 285/509 (55.99%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDL-----NTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L AQ A+ A ++GD+ G+SD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+ SADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEVLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLL-------AQAERQAPLPASVATANVSALSNGKRAAESGDMGPGGKRMRPGVSDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGVDSSAVLFDRTSGEILSTLNGHSKKVTSVKFVAQND---VFLSSSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVY--QVGSVKAEWN 474
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_021290886.1 (pre-mRNA-processing factor 19 homolog 1-like isoform X1 [Herrania umbratica]) HSP 1 Score: 340.1 bits (871), Expect = 1.200e-89 Identity = 199/492 (40.45%), Postives = 277/492 (56.30%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVY 490 M+C ISGEV EEPV+S+ SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E P A + GISD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY Sbjct: 1 MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPATAVTANVSALTNGKRAAEDVDMGPGAKRMRP--GISDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGIDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---AFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVEDPSNSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGTYLAI-AGSDIRVY 464
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_021290887.1 (pre-mRNA-processing factor 19 homolog 1-like isoform X2 [Herrania umbratica]) HSP 1 Score: 339.3 bits (869), Expect = 2.100e-89 Identity = 200/492 (40.65%), Postives = 278/492 (56.50%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVY 490 M+C ISGEV EEPV+S+ SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ Q+ G E P A + GISD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D L+GSADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+VY Sbjct: 1 MNCSISGEVPEEPVVSKKSGLLYEKRLIERHISDYGKCPVTGEPLTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLA--QAERQAPLPATAVTANVSALTNGKREDVDMGPGAKRMRP--GISDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGIDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---AFLSGSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGICLTQVEDPSNSMGYTSAAFHPDGLILGTGTTEATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGTYLAI-AGSDIRVY 462
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_022740246.1 (pre-mRNA-processing factor 19 homolog 2-like isoform X1 [Durio zibethinus]) HSP 1 Score: 339.3 bits (869), Expect = 2.100e-89 Identity = 199/504 (39.48%), Postives = 284/504 (56.35%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDL---GEGVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S+ SG++YEKR+I ++I K P G+ LT DD++ V++ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P G G+S++++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ L ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+GSADKTV++W+ S +Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L +V FD SG YL + AG+ ++VY + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSKKSGLLYEKRLIERHIADYGKCPVTGDPLTMDDIVPVQTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLALAERQAPLPTSAVVANVSTLSNGKRAAEDEDLGP--GAKRVCPGVSESIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-LSKDIVATGGIDSNAVLFDRTSGEILSTLSGHSKKVTSVKFVAPND---VCLSGSADKTVRIWQ--------------------GSEDGNYDCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQNTPTNSVDFDHSGSYLAI-AGSDVRVY--QVGSVKAEWN 474
BLAST of NO08G00290 vs. NCBI_GenBank
Match: XP_016717553.1 (PREDICTED: pre-mRNA-processing factor 19 homolog 1-like [Gossypium hirsutum]) HSP 1 Score: 339.0 bits (868), Expect = 2.700e-89 Identity = 200/504 (39.68%), Postives = 281/504 (55.75%), Query Frame = 0 Query: 1 MHCGISGEVCEEPVLSRPSGVVYEKRVILKYIEAEHKDPANGEELTPDDLITVKSSKVVRPRPVTATSVPGLLALFQNEWDALMLETHTLKEHLAATRTELANALYQHDAACRVIARLARERDSALSQLSALQSSFAQRXXXXXXXXXXXXXXXGAMEVEPTAPKAGDLNTPIGISDAVLADITSTWEGLSKGRKKRPLPEGLPSPEEMGKWTAVEEHALHSTSKPGVLALDVSPLEARLLVTGGMDKEAVVFDRQAEVVVDRLKGHGKKVTAVRFHPSADFGGLILTGSADKTVKLWKPAASSSTRGSGKAGTKGSTPSSPKASYTEVASLSVHASDVTALAIQATGHYFASASKDKTWALHDASSGQCLAHVVDPAIAGGYECLAFHPDGVLLGTGTTASKVRMWDVKTQANVATFEDHTGPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRSLDLGE---GVQAVAFDPSGQYLGVAAGTGIKVYLAKAWSPVAEFN 502 M+C ISGEV EEPV+S SG++YEKR+I ++I K P GE LT DD++ VK+ K+V+PR +TA S+PG+L +FQNEWDALML L++ L R EL++ALYQHDAACRVIARL +ERD A S L+ + A E E P G G+SD+++A++T LS+ RKKR +P L + + ++T + H LH T+KPG+ ++D++ ++ TGG+D AV+FDR + ++ L GH KKVT+V+F D + L+ SADKTV++W+ S Y L H ++V A+ + AT +YF +AS D TW +D SSG CL V DP+ + GY AFHPDG++LGTGTT + VR+WDVK++ NVA F+ HTG V RS +L + +V FD SG YL + AG+ I+V+ + S AE+N Sbjct: 1 MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEALTMDDIVPVKTGKIVKPRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQAPLPASAATANVSALSNGKRAAESEDMGP--GGKRMRPGVSDSIIAELTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDIN-FSKDIVATGGVDSSAVLFDRTSGEILSTLSGHSKKVTSVKFVAQND---VFLSSSADKTVRIWQ--------------------GSEDGKYDCRHILKDHTAEVQAVTVHATNNYFVTASLDMTWCFYDLSSGLCLTQVEDPSNSMGYTSAAFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAV-TAISFSENGYFLATAAHDGVKLWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAI-AGSDIRVF--QVGSVKAEWN 474 The following BLAST results are available for this feature:
BLAST of NO08G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00290 ID=NO08G00290|Name=NO08G00290|organism=Nannochloropsis oceanica|type=gene|length=4622bpback to top protein sequence of NO08G00290.1 >NO08G00290.1-protein ID=NO08G00290.1-protein|Name=NO08G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bpback to top protein sequence of NO08G00290.2 >NO08G00290.2-protein ID=NO08G00290.2-protein|Name=NO08G00290.2|organism=Nannochloropsis oceanica|type=polypeptide|length=530bpback to top Synonyms
Publications
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