NO08G00260, NO08G00260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00260 vs. NCBI_GenBank
Match: EWM26489.1 (ddi1p [Nannochloropsis gaditana]) HSP 1 Score: 130.6 bits (327), Expect = 1.300e-26 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0 Query: 296 QQMLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKI 363 Q+MLYVDC IN+RRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKI Sbjct: 316 QEMLYVDCAINHRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKI 382
BLAST of NO08G00260 vs. NCBI_GenBank
Match: EWM26491.1 (hypothetical protein Naga_100646g4, partial [Nannochloropsis gaditana]) HSP 1 Score: 117.5 bits (293), Expect = 1.100e-22 Identity = 57/75 (76.00%), Postives = 63/75 (84.00%), Query Frame = 0 Query: 364 LGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRSLGGAVEKSREEIVPFSISAVPPQVFGKADG 439 LGRFQIQTR+SIIDSLSPPFVIGLDVLRHC+C +SFQ++ L+LRS GGAVEKSREE VPFSI A P V K G Sbjct: 4 LGRFQIQTRISIIDSLSPPFVIGLDVLRHCRCDVSFQNQALILRSPGGAVEKSREETVPFSIGAAPSPVITKEGG 78
BLAST of NO08G00260 vs. NCBI_GenBank
Match: KFM75189.1 (Protein DDI1-like protein, partial [Stegodyphus mimosarum]) HSP 1 Score: 97.8 bits (242), Expect = 9.200e-17 Identity = 57/167 (34.13%), Postives = 87/167 (52.10%), Query Frame = 0 Query: 286 MQVHKELHHQQQMLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRSLG--------GAVEKS--REEIVPFSISAVPPQVFGKADGREKG 443 ++ H E Q MLY++C +N +RA +D+GA TT+MS A A CG++ +D G KGVG KILG VH I + +Q+ SI++ ++GLD+L+ QC I + VLV+ + G G + +S E +VP + PP + + KG Sbjct: 212 IEYHPESFGQVTMLYINCKVNGHAVRAFIDSGAQTTIMSQACAERCGIMRLVDKRWAGYAKGVGIQKILGRVHLGHIQINDVFLQSSFSILEDQVMDMLLGLDMLKRHQCCIDLKRNVLVIGTTGTETPFLSEGDLPRSVLTEPLVPGEMDTSPPGTSTSKNNQSKG 378
BLAST of NO08G00260 vs. NCBI_GenBank
Match: CBJ32761.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 96.3 bits (238), Expect = 2.700e-16 Identity = 53/139 (38.13%), Postives = 80/139 (57.55%), Query Frame = 0 Query: 286 MQVHKELHHQQQMLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRSLGGAVEKSREEIVPFS 425 M+ E+ + MLY+D IN R++A VD+GA +T+MS A A +CGL+ +DT G +GVG KILG +H A+I +G +I+ + F+ GLD+L+ CVI + +L L S G +V E+ +P S Sbjct: 187 MEEAPEVFARVSMLYIDTEINGVRVKAFVDSGAQSTIMSAACAEKCGLMRLVDTRFHGEARGVGTGKILGRIHMAQIKIGDHHFPCSFTILQTSDVDFLFGLDMLKRHLCVIDLKSSMLGLGSAGASVPFLSEKDLPSS 325
BLAST of NO08G00260 vs. NCBI_GenBank
Match: CBN77640.1 (Peptidase aspartic, catalytic; UBA-like [Ectocarpus siliculosus]) HSP 1 Score: 95.9 bits (237), Expect = 3.500e-16 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 0 Query: 298 MLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVIS 399 ML+++C +N R LRA VDTGA TVMS A A CGL S ID S G GVGFA+ILG +H+A I +G ++ +++I+ ++GLDVLR +C IS Sbjct: 211 MLFLECEVNGRVLRAFVDTGAQVTVMSAACAERCGLASRIDKSYAGRAVGVGFARILGRIHDASIRIGNSCLRCSLTVIEHGEIDLLVGLDVLRAHRCEIS 311
BLAST of NO08G00260 vs. NCBI_GenBank
Match: NP_001018195.1 (UBA domain protein Mud1 [Schizosaccharomyces pombe] >Q10256.1 RecName: Full=UBA domain-containing protein mud1; AltName: Full=DNA-damage-inducible protein DDI1 homolog; AltName: Full=UBA domain-containing protein 1 >CAA93579.1 UBA domain protein Mud1 [Schizosaccharomyces pombe]) HSP 1 Score: 95.9 bits (237), Expect = 3.500e-16 Identity = 53/142 (37.32%), Postives = 79/142 (55.63%), Query Frame = 0 Query: 289 HKELHHQQQMLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRSLGGAVEKSREEIVPFSISAVPP 431 H E+ Q ML+V+ IN +++A VD+GA T++S A +CGL +DT G KGVG AKILGCVH A + +G + R ++I+ ++GLD+LR Q I ++ VLR G + E +P ++ V P Sbjct: 101 HPEVFGQVYMLFVNVEINGHKVKAFVDSGAQATILSADCAEKCGLTRLLDTRFQGVAKGVGMAKILGCVHSAPLKIGDLYLPCRFTVIEGRDVDMLLGLDMLRRYQACIDLENN--VLRIHGKEIPFLGESEIPKLLANVEP 240
BLAST of NO08G00260 vs. NCBI_GenBank
Match: XP_020436941.1 (ubiquitin-associated domain-containing protein [Heterostelium album PN500] >EFA84830.1 ubiquitin-associated domain-containing protein [Heterostelium album PN500]) HSP 1 Score: 94.0 bits (232), Expect = 1.300e-15 Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 0 Query: 298 MLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDS--LSPPFVIGLDVLRHCQCVISFQDKVLVLRSLGGAV--EKSREEIV----PFSISAVPP 431 MLY+DCTINN ++ VDTGA ++M+L AR+CGL ID G KGVG AKI+G VH A++ +G I +SI+DS F+ GLD+L+ Q +++ +D VL + EK +EI+ P + VPP Sbjct: 203 MLYLDCTINNHPIKVFVDTGAQKSIMTLNCARKCGLDRLIDKRFQGIAKGVGTAKIVGRVHAAEMNMGSAHITISLSILDSPGQDTEFIFGLDMLKKHQALVNLRDNVLEFGEMRVPFLQEKDLKEILEKNDPLPENYVPP 343
BLAST of NO08G00260 vs. NCBI_GenBank
Match: XP_014666622.1 (PREDICTED: protein DDI1 homolog 2-like [Priapulus caudatus]) HSP 1 Score: 93.2 bits (230), Expect = 2.300e-15 Identity = 46/113 (40.71%), Postives = 70/113 (61.95%), Query Frame = 0 Query: 298 MLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRSLG 411 MLY+DC +N +++A VD+GA TT+MS A A C + IDT G KGVG KI+G VH +I +G+ + + SI++ ++GLD+LR QC+I + +LV+ + G Sbjct: 221 MLYIDCRVNGHQVKAFVDSGAQTTIMSQACAERCNIKRLIDTRWAGVAKGVGTQKIIGRVHLGQIQIGKDFLTSSFSILEDQPMDMLLGLDMLRRHQCIIDLKRNLLVIGTTG 333
BLAST of NO08G00260 vs. NCBI_GenBank
Match: GAQ81962.1 (DNA damage-inducible protein 1 [Klebsormidium nitens]) HSP 1 Score: 92.4 bits (228), Expect = 3.900e-15 Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 0 Query: 286 MQVHKELHHQQQMLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRSLGGAVEKSREEIVP 423 M+ + E + MLYVD +N L+A VDTGA +T+MS A A+ CG++ +D G KGVG +KI+G VH A I +G+ + +I+++ F+ GLD+LR QCVI +D L S AV E +P Sbjct: 185 MEHNPEAFGRVVMLYVDMEVNGMPLKAFVDTGAQSTIMSEACAKRCGIMRLVDKRYHGIAKGVGTSKIIGRVHLATIKVGQVFLPCTFTILENQDMEFIFGLDMLRKHQCVIDLKDSSLRFGSSDIAVPFLPEHEIP 321
BLAST of NO08G00260 vs. NCBI_GenBank
Match: CCE28757.1 (related to SNARE binding protein [Claviceps purpurea 20.1]) HSP 1 Score: 92.0 bits (227), Expect = 5.000e-15 Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = 0 Query: 286 MQVHKELHHQQQMLYVDCTINNRRLRACVDTGASTTVMSLAMARECGLLSHIDTSVVGGVKGVGFAKILGCVHEAKILLGRFQIQTRVSIIDSLSPPFVIGLDVLRHCQCVISFQDKVLVLRS-----LGGAVEKSREEIVPFSISAVPPQVFGKADGREKG 443 M+ + E+ + +LY+D +N R++A VD+GA T+MS A A +CG++ IDT G +GVG AKILG VH A+I +G + ++++ S ++GLD+L+ Q I L+++ LG A EE P A P G G+E G Sbjct: 183 MEHNPEVFGRVHLLYIDVEVNGHRVKALVDSGAQATIMSPAYAEDCGIMRLIDTRFAGVARGVGTAKILGRVHSAQIKVGNLFLPCSFTVMEGKSTHLLLGLDMLKRYQATIDLSRDRLIIQGEEIPFLGEADIPKDEE--PVEQEATIPGPAGTTIGQETG 342 The following BLAST results are available for this feature:
BLAST of NO08G00260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00260 ID=NO08G00260|Name=NO08G00260|organism=Nannochloropsis oceanica|type=gene|length=1831bpback to top protein sequence of NO08G00260.1 >NO08G00260.1-protein ID=NO08G00260.1-protein|Name=NO08G00260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=461bpback to top Synonyms
Publications
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