NO08G00250, NO08G00250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00250 vs. NCBI_GenBank
Match: XP_005853763.1 (large subunit ribosomal protein L31e [Nannochloropsis gaditana CCMP526] >EKU22597.1 large subunit ribosomal protein L31e [Nannochloropsis gaditana CCMP526] >EWM26499.1 60s ribosomal protein l31 [Nannochloropsis gaditana]) HSP 1 Score: 213.8 bits (543), Expect = 2.900e-52 Identity = 108/116 (93.10%), Postives = 110/116 (94.83%), Query Frame = 0 Query: 1 MVKAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVDE 117 MVKA KAPK DVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVD LNK+IWKQGIRNVP+RVRVKLARRRNEDEEA EKLYTLVTLVEVDSFKGLQN SVDE Sbjct: 1 MVKATKAPKADVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDASLNKYIWKQGIRNVPYRVRVKLARRRNEDEEAAEKLYTLVTLVEVDSFKGLQNTSVDE 116
BLAST of NO08G00250 vs. NCBI_GenBank
Match: XP_004206070.1 (PREDICTED: 60S ribosomal protein L31-like [Hydra vulgaris]) HSP 1 Score: 162.2 bits (409), Expect = 1.000e-36 Identity = 77/113 (68.14%), Postives = 95/113 (84.07%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K+ K+P +VVTR YTINLHKR+H + FK++APRAIREIKKFA K +GT DVR+DTGLNK++W GIRNVP R RV+LARRRNEDE++ KLYTLVT+V+VDSFK LQ +V+ Sbjct: 9 KSTKSPMNEVVTREYTINLHKRIHDLPFKKKAPRAIREIKKFAKKMMGTTDVRIDTGLNKYVWSHGIRNVPRRARVRLARRRNEDEDSANKLYTLVTVVKVDSFKKLQTINVE 121
BLAST of NO08G00250 vs. NCBI_GenBank
Match: OTF70593.1 (hypothetical protein BLA29_010333 [Euroglyphus maynei]) HSP 1 Score: 160.6 bits (405), Expect = 2.900e-36 Identity = 78/114 (68.42%), Postives = 95/114 (83.33%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVDE 117 K K+ +V+TR YT++LHKRLH + FK+RAPRAI+EI+KFA K + T+DVR+DT LNKFIW QGIRNVPFRVRV+LARRRNEDE++ KLYTLVTLV V +FKGLQ +VDE Sbjct: 11 KKTKSALNEVITREYTVHLHKRLHGVGFKKRAPRAIKEIRKFAQKQMATEDVRIDTRLNKFIWSQGIRNVPFRVRVRLARRRNEDEDSVHKLYTLVTLVPVATFKGLQTDNVDE 124
BLAST of NO08G00250 vs. NCBI_GenBank
Match: XP_022103062.1 (60S ribosomal protein L31-like [Acanthaster planci] >XP_022103063.1 60S ribosomal protein L31-like [Acanthaster planci]) HSP 1 Score: 157.9 bits (398), Expect = 1.900e-35 Identity = 75/113 (66.37%), Postives = 97/113 (85.84%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K A++ +VVTR YT++LHKR+H ++FK+RAPRAI+EI+KFA+K +GT+DVRVDT LNK IW +G+R+VPFRVRV+LAR+RNEDE++ KLYTLVT VEV SFKGLQ +VD Sbjct: 8 KKARSALNEVVTREYTVHLHKRIHGVSFKKRAPRAIKEIRKFAMKMMGTEDVRVDTRLNKHIWSRGVRSVPFRVRVRLARKRNEDEDSPHKLYTLVTHVEVPSFKGLQTVNVD 120
BLAST of NO08G00250 vs. NCBI_GenBank
Match: XP_002116073.1 (expressed hypothetical protein [Trichoplax adhaerens] >EDV21473.1 expressed hypothetical protein [Trichoplax adhaerens]) HSP 1 Score: 157.5 bits (397), Expect = 2.500e-35 Identity = 76/113 (67.26%), Postives = 96/113 (84.96%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K +++ ++V+R YT++LHKRLH + FK+RAPRAI+E+KKFAIKA+GT DVRVD+GLNK IW +GIRNVPFRVRV L+R+RNEDE+A KLYTLVT V V+SFKGLQ +VD Sbjct: 7 KKSRSAIDEIVSREYTVHLHKRLHGVGFKKRAPRAIKELKKFAIKAMGTTDVRVDSGLNKHIWSKGIRNVPFRVRVCLSRKRNEDEDAANKLYTLVTHVPVESFKGLQTVNVD 119
BLAST of NO08G00250 vs. NCBI_GenBank
Match: XP_015781089.1 (PREDICTED: 60S ribosomal protein L31-like [Tetranychus urticae]) HSP 1 Score: 157.5 bits (397), Expect = 2.500e-35 Identity = 77/114 (67.54%), Postives = 93/114 (81.58%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVDE 117 + AK+ DV+ R YTIN+HKR+H FK+RAPRAI+EIKKFA K +GT DVRVDT LNKFIW +GIRNVPFRVRV+L+R+RNEDE++ KLYTLVT V V +FKGLQ +VDE Sbjct: 8 RPAKSAINDVIQREYTINIHKRIHGKGFKKRAPRAIKEIKKFAFKQMGTSDVRVDTRLNKFIWSKGIRNVPFRVRVRLSRKRNEDEDSPNKLYTLVTYVNVATFKGLQTENVDE 121
BLAST of NO08G00250 vs. NCBI_GenBank
Match: Q9XGL4.1 (RecName: Full=60S ribosomal protein L31 >CAB45375.1 ribosomal protein L31 [Cyanophora paradoxa]) HSP 1 Score: 157.1 bits (396), Expect = 3.200e-35 Identity = 76/110 (69.09%), Postives = 92/110 (83.64%), Query Frame = 0 Query: 6 KAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K+ ++VTR YTINLHKRLH + FK+RAPRA++EIKKFA K +GT DVRVD LNKF+W QGIR+VP+RVRV+LAR+RN+DE+A EKLYTLVT V V SFKGLQ +VD Sbjct: 8 KSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTYVPVTSFKGLQTQNVD 117
BLAST of NO08G00250 vs. NCBI_GenBank
Match: KFM77525.1 (60S ribosomal protein L31, partial [Stegodyphus mimosarum]) HSP 1 Score: 156.4 bits (394), Expect = 5.500e-35 Identity = 78/113 (69.03%), Postives = 94/113 (83.19%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K K+ ++VVTR YTI+LHKRLH + FK+RAPRAI+EI+KFA K +GT DVRVDT LNKFIW +GIRNVP+RVRV+L+RRRNEDE++ KLYTLVT V V SFKGLQ +VD Sbjct: 8 KKGKSALSEVVTREYTIHLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFIWSKGIRNVPYRVRVQLSRRRNEDEDSIHKLYTLVTHVPVTSFKGLQTENVD 120
BLAST of NO08G00250 vs. NCBI_GenBank
Match: ABI52770.1 (ribosomal protein L31 [Argas monolakensis]) HSP 1 Score: 156.0 bits (393), Expect = 7.200e-35 Identity = 76/113 (67.26%), Postives = 93/113 (82.30%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K K+ +VVTR YTI+LHKRLH + FK++APRAI+EI+KFA K +GT DVRVDT LNKFIW +G+RNVPFRVRV+LARRRNEDE++ KLYTLVT V VD+FK LQ +V+ Sbjct: 12 KRGKSTLNEVVTREYTIHLHKRLHGVGFKKKAPRAIKEIRKFAEKQMGTSDVRVDTRLNKFIWSKGVRNVPFRVRVRLARRRNEDEDSPNKLYTLVTFVPVDTFKKLQTVNVE 124
BLAST of NO08G00250 vs. NCBI_GenBank
Match: XP_023721473.1 (60S ribosomal protein L31 [Cryptotermes secundus] >PNF19264.1 60S ribosomal protein L31 [Cryptotermes secundus]) HSP 1 Score: 156.0 bits (393), Expect = 7.200e-35 Identity = 76/113 (67.26%), Postives = 94/113 (83.19%), Query Frame = 0 Query: 3 KAAKAPKTDVVTRLYTINLHKRLHKITFKERAPRAIREIKKFAIKALGTKDVRVDTGLNKFIWKQGIRNVPFRVRVKLARRRNEDEEATEKLYTLVTLVEVDSFKGLQNASVD 116 K +K+ +VVTR YTINLHKRLH + FK+RAPRA++EI+KFA+K +GT DVRVDT LNK +W +GIRNVPFRVRV+L+RRRN+DE++ KLYTLVT V V SFKGLQ +VD Sbjct: 8 KKSKSAINEVVTREYTINLHKRLHGVGFKKRAPRAVKEIRKFAMKQMGTPDVRVDTRLNKQVWSKGIRNVPFRVRVRLSRRRNDDEDSPNKLYTLVTYVPVASFKGLQTENVD 120 The following BLAST results are available for this feature:
BLAST of NO08G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00250 ID=NO08G00250|Name=NO08G00250|organism=Nannochloropsis oceanica|type=gene|length=1370bpback to top protein sequence of NO08G00250.1 >NO08G00250.1-protein ID=NO08G00250.1-protein|Name=NO08G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=117bpback to top protein sequence of NO08G00250.2 >NO08G00250.2-protein ID=NO08G00250.2-protein|Name=NO08G00250.2|organism=Nannochloropsis oceanica|type=polypeptide|length=119bpback to top Synonyms
Publications
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