NO08G00160, NO08G00160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00160 vs. NCBI_GenBank
Match: EWM26518.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 284.6 bits (727), Expect = 7.300e-73 Identity = 138/169 (81.66%), Postives = 152/169 (89.94%), Query Frame = 0 Query: 304 ALMNLRFPAQHETDFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYMRGPFASFCARREWEHERGSEGATGGGVEGILPPLFAHGHRRLPLPMSGGSRQHHLQQVQMLTGQLLQTQLELQAQVQHYITSQVNIQSELVKDTVS 473 +LM+LRFP QHETDFVGAVFKLGL+CSSPKVLMDLMPMT+TLTTEHIKSHLQKYRLHG RSK+EFVEY+NGYMRGPFASFCARREWEH+R G +G+LPPLFAHGHRRLP + GG+RQHHLQQVQ LTGQLLQTQL+LQ QVQHYITSQ+ IQSEL+KDTVS Sbjct: 308 SLMSLRFPPQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYNGYMRGPFASFCARREWEHDRSPYGP-----DGLLPPLFAHGHRRLPPALGGGNRQHHLQQVQALTGQLLQTQLDLQVQVQHYITSQITIQSELIKDTVS 471
BLAST of NO08G00160 vs. NCBI_GenBank
Match: CBJ29351.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.0 bits (206), Expect = 1.900e-12 Identity = 36/57 (63.16%), Postives = 50/57 (87.72%), Query Frame = 0 Query: 317 DFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFN 374 DFV AVF +GLKC+SPK+L+++MP+ + LT+EHIKSHLQKYRLH RS++EF++ +N Sbjct: 143 DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 199
BLAST of NO08G00160 vs. NCBI_GenBank
Match: EWM27574.1 (two-component response regulator arr12 [Nannochloropsis gaditana]) HSP 1 Score: 81.6 bits (200), Expect = 9.400e-12 Identity = 37/76 (48.68%), Postives = 54/76 (71.05%), Query Frame = 0 Query: 310 FPAQHETDFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYMRGPFASFCA 386 +P DFV A+F +GLKC+SPK +M++M T+ LT +HIKSHLQKYRLH R+++EF+++F + PF + A Sbjct: 60 WPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFLQHFG---KNPFVAGAA 132
BLAST of NO08G00160 vs. NCBI_GenBank
Match: CBJ25938.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.7 bits (169), Expect = 3.700e-8 Identity = 36/56 (64.29%), Postives = 41/56 (73.21%), Query Frame = 0 Query: 311 PAQHETDFVGAVFKLGLKCSSPKVLMDLM-PMTETLTTEHIKSHLQKYRLHGNRSK 366 P + F A+F+LGLK SSPKVLM LM P +LTTEHIKS LQKYRLH +RSK Sbjct: 15 PDKASASFAAAIFELGLKHSSPKVLMKLMPPKANSLTTEHIKSRLQKYRLHAHRSK 70
BLAST of NO08G00160 vs. NCBI_GenBank
Match: OEU21412.1 (hypothetical protein FRACYDRAFT_235035 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 68.9 bits (167), Expect = 6.300e-8 Identity = 33/68 (48.53%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 310 FPAQHETDFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYMR 378 +P DFV A+F +GLK SSP +++ M E +TTE IKSHLQKYRLH +SK EF+ + +R Sbjct: 291 WPEDLHRDFVSAIFDVGLKHSSPATILEHMSKHEQITTERIKSHLQKYRLHRVKSKKEFISSYEASLR 358
BLAST of NO08G00160 vs. NCBI_GenBank
Match: XP_002181659.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46873.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 67.0 bits (162), Expect = 2.400e-7 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 0 Query: 310 FPAQHETDFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYMR 378 +P DFV A+F +GLK SSP +++ MP +T+E IKSHLQKYRLH +SK +F+ ++ +R Sbjct: 224 WPEDLHRDFVSAIFDVGLKQSSPSTILETMPKHADVTSERIKSHLQKYRLHRIKSKQDFMTAYDATVR 291
BLAST of NO08G00160 vs. NCBI_GenBank
Match: GAX20002.1 (hypothetical protein FisN_1Lh524 [Fistulifera solaris]) HSP 1 Score: 67.0 bits (162), Expect = 2.400e-7 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 310 FPAQHETDFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYM 377 +P DFV AVF +GLK SSP +++ MP E + +E +KSHLQKYR++ N+SK EF+ ++ M Sbjct: 175 WPDDLHRDFVAAVFDVGLKHSSPSAILEHMPAHEQINSERVKSHLQKYRINRNKSKKEFMTAYDSSM 241
BLAST of NO08G00160 vs. NCBI_GenBank
Match: GAX14324.1 (hypothetical protein FisN_1Hh524 [Fistulifera solaris]) HSP 1 Score: 66.6 bits (161), Expect = 3.100e-7 Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 Query: 310 FPAQHETDFVGAVFKLGLKCSSPKVLMDLMPMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFNGYM 377 +P DFV AVF +GLK SSP +++ MP E + +E +KSHLQKYR++ N+SK EF+ ++ M Sbjct: 173 WPDDLHRDFVAAVFDVGLKHSSPSAILEHMPAHEQINSERVKSHLQKYRINRNKSKREFMTAYDSSM 239
BLAST of NO08G00160 vs. NCBI_GenBank
Match: XP_009836907.1 (hypothetical protein H257_11609 [Aphanomyces astaci] >ETV73481.1 hypothetical protein H257_11609 [Aphanomyces astaci]) HSP 1 Score: 65.5 bits (158), Expect = 7.000e-7 Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0 Query: 318 FVGAVFKLGLKCSSPKVLMDLM---PMTETLTTEHIKSHLQKYRLHGNRSKDEFVEYFN 374 FV AVF +GLK +SPK L+ LM T LTTEH+KSHLQKYRL+ +RS+ EF+++F+ Sbjct: 97 FVAAVFDVGLKNASPKALLTLMGTPACTNGLTTEHLKSHLQKYRLNYDRSRVEFLKFFD 155
BLAST of NO08G00160 vs. NCBI_GenBank
Match: OQR81572.1 (hypothetical protein THRCLA_11609 [Thraustotheca clavata]) HSP 1 Score: 65.5 bits (158), Expect = 7.000e-7 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 0 Query: 318 FVGAVFKLGLKCSSPKVLMDLM--PMTET-LTTEHIKSHLQKYRLHGNRSKDEFVEYFN 374 FV AVF +GLK +SPK L+ LM P T + LTTEH+KSHLQKYRL+ +RS+ EF+++F+ Sbjct: 77 FVAAVFDVGLKNASPKALLTLMGNPATSSGLTTEHLKSHLQKYRLNYDRSRVEFLKFFD 135 The following BLAST results are available for this feature:
BLAST of NO08G00160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00160 ID=NO08G00160|Name=NO08G00160|organism=Nannochloropsis oceanica|type=gene|length=4268bpback to top protein sequence of NO08G00160.1 >NO08G00160.1-protein ID=NO08G00160.1-protein|Name=NO08G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=639bpback to top Synonyms
Publications
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