NO08G00100, NO08G00100 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO08G00100 vs. NCBI_GenBank
Match: CBN77673.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.7 bits (169), Expect = 3.600e-8 Identity = 52/157 (33.12%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 443 AEGRKAKQAKAD----ERYQCAVQGLQDRIQKTLTRAENRAHFYAKVAAERAQATLLMRVEKELRQKDKEENVKRIQRKEEYEKSCLLARQEADTARYEEIKRERAYLLEQRKATAQETMIRKHRLREAMEEMKIKNRFWVEGVGGDGGEERRKGGK 596 A+ R QAK D +R + + Q D + L R + FY ++ ER + + ++ +L +DK +N++R++R +E+ + L R E +T R E+IK ER +L+EQR A A + + +KH+++EAME+M+ N F DG ++RR+ K Sbjct: 348 AKKRAEDQAKQDNIRAKRLEASYQDRADHRKDILARRRQKDKFYGQIRNERCKDLAMKKLYHDLVMEDKRQNIERLRRVDEFVRLQTLLRIEQETERTEKIKAEREFLVEQRIAVANKAIRKKHKIKEAMEKMRATNNFHGIDALLDGLDKRRRKSK 504
BLAST of NO08G00100 vs. NCBI_GenBank
Match: ETI36684.1 (hypothetical protein F443_17200 [Phytophthora parasitica P1569] >ETK76905.1 hypothetical protein L915_16743 [Phytophthora parasitica] >ETL30331.1 hypothetical protein L916_16652 [Phytophthora parasitica] >ETM36771.1 hypothetical protein L914_16576 [Phytophthora parasitica] >ETP06515.1 hypothetical protein F441_17074 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 65.9 bits (159), Expect = 5.300e-7 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0 Query: 392 RNKAEKRIQGALLRNHAIQEAKRK---DYQARAAEAAARAEQNHV-ELLEAAAKAAEGRKAKQAKADERYQCAVQGLQDRIQKTLTRAENRAHFYAKVAAERAQATLLMRVEKELRQKDKEENVKRIQRKEEYEKSCLLARQEADTARYEEIKRERAYLLEQRKATAQETMIRKHRLREAMEEMKIKNRFW 579 R KA RIQ +N K++ D QA AAE A E+ + EL E AAK+ ++ + D + Q + + L + E ER +A LL +VE +L KE+NV RIQR E Y + LL R + AR +K + LL+ R+ A E MIR+HRL EA+E+++ + W Sbjct: 326 REKANARIQNVTYQNELTIARKKQEVTDKQAAAAERAREIEKKTINELKERAAKSXXXXXXRKKRLDAAHALR----QKHVSELLAKREQLEAKMEDTQHEREKARLLAQVEHQLSITQKEQNVARIQRMEAYARQQLLQRIASADARSRAVKERKRALLQARQQVATEAMIRRHRLAEAVEKLRTTSTKW 512
BLAST of NO08G00100 vs. NCBI_GenBank
Match: XP_008912556.1 (hypothetical protein PPTG_16805 [Phytophthora parasitica INRA-310] >ETN02173.1 hypothetical protein PPTG_16805 [Phytophthora parasitica INRA-310] >KUF96758.1 Reticulocyte-binding protein 2 a [Phytophthora nicotianae]) HSP 1 Score: 65.9 bits (159), Expect = 5.300e-7 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0 Query: 392 RNKAEKRIQGALLRNHAIQEAKRK---DYQARAAEAAARAEQNHV-ELLEAAAKAAEGRKAKQAKADERYQCAVQGLQDRIQKTLTRAENRAHFYAKVAAERAQATLLMRVEKELRQKDKEENVKRIQRKEEYEKSCLLARQEADTARYEEIKRERAYLLEQRKATAQETMIRKHRLREAMEEMKIKNRFW 579 R KA RIQ +N K++ D QA AAE A E+ + EL E AAK+ ++ + D + Q + + L + E ER +A LL +VE +L KE+NV RIQR E Y + LL R + AR +K + LL+ R+ A E MIR+HRL EA+E+++ + W Sbjct: 326 REKANARIQNVTYQNELTIARKKQEVTDKQAAAAERAREIEKKTINELKERAAKSXXXXXXRKKRLDAAHALR----QKHVSELLAKREQLEAKMEDTQHEREKARLLAQVEHQLSITQKEQNVARIQRMEAYARQQLLQRIASADARSRAVKERKRALLQARQQVATEAMIRRHRLAEAVEKLRTTSTKW 512
BLAST of NO08G00100 vs. NCBI_GenBank
Match: ETO65413.1 (hypothetical protein F444_17242 [Phytophthora parasitica P1976]) HSP 1 Score: 65.9 bits (159), Expect = 5.300e-7 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0 Query: 392 RNKAEKRIQGALLRNHAIQEAKRK---DYQARAAEAAARAEQNHV-ELLEAAAKAAEGRKAKQAKADERYQCAVQGLQDRIQKTLTRAENRAHFYAKVAAERAQATLLMRVEKELRQKDKEENVKRIQRKEEYEKSCLLARQEADTARYEEIKRERAYLLEQRKATAQETMIRKHRLREAMEEMKIKNRFW 579 R KA RIQ +N K++ D QA AAE A E+ + EL E AAK+ ++ + D + Q + + L + E ER +A LL +VE +L KE+NV RIQR E Y + LL R + AR +K + LL+ R+ A E MIR+HRL EA+E+++ + W Sbjct: 326 REKANARIQNVTYQNELTIARKKQEVTDKQAAAAERAREIEKKTINELKERAAKSXXXXXXRKKRLDAAHALR----QKHVSELLAKREQLEAKMEDTQHEREKARLLAQVEHQLSITQKEQNVARIQRMEAYARQQLLQRIASADARSRAVKERKRALLQARQQVATEAMIRRHRLAEAVEKLRTTSTKW 512
BLAST of NO08G00100 vs. NCBI_GenBank
Match: ETP34627.1 (hypothetical protein F442_17075 [Phytophthora parasitica P10297]) HSP 1 Score: 65.9 bits (159), Expect = 5.300e-7 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0 Query: 392 RNKAEKRIQGALLRNHAIQEAKRK---DYQARAAEAAARAEQNHV-ELLEAAAKAAEGRKAKQAKADERYQCAVQGLQDRIQKTLTRAENRAHFYAKVAAERAQATLLMRVEKELRQKDKEENVKRIQRKEEYEKSCLLARQEADTARYEEIKRERAYLLEQRKATAQETMIRKHRLREAMEEMKIKNRFW 579 R KA RIQ +N K++ D QA AAE A E+ + EL E AAK+ ++ + D + Q + + L + E ER +A LL +VE +L KE+NV RIQR E Y + LL R + AR +K + LL+ R+ A E MIR+HRL EA+E+++ + W Sbjct: 326 REKANARIQNVTYQNELTIARKKQEVTDKQAAAAERAREIEKKTINELKERAAKSXXXXXXRKKRLDAAHALR----QKHVSELLAKREQLEAKMEDTQHEREKARLLAQVEHQLSITQKEQNVARIQRMEAYARQQLLQRIASADARSRAVKERKRALLQARQQVATEAMIRRHRLAEAVEKLRTTSTKW 512
BLAST of NO08G00100 vs. NCBI_GenBank
Match: KUF94324.1 (Peregrin [Phytophthora nicotianae]) HSP 1 Score: 65.9 bits (159), Expect = 5.300e-7 Identity = 65/191 (34.03%), Postives = 94/191 (49.21%), Query Frame = 0 Query: 392 RNKAEKRIQGALLRNHAIQEAKRK---DYQARAAEAAARAEQNHV-ELLEAAAKAAEGRKAKQAKADERYQCAVQGLQDRIQKTLTRAENRAHFYAKVAAERAQATLLMRVEKELRQKDKEENVKRIQRKEEYEKSCLLARQEADTARYEEIKRERAYLLEQRKATAQETMIRKHRLREAMEEMKIKNRFW 579 R KA RIQ +N K++ D QA AAE A E+ + EL E AAK+ ++ + D + Q + + L + E ER +A LL +VE +L KE+NV RIQR E Y + LL R + AR +K + LL+ R+ A E MIR+HRL EA+E+++ + W Sbjct: 326 REKANARIQNVTYQNELTIARKKQEVTDKQAAAAERAREIEKKTINELKERAAKSXXXXXXRKKRLDAAHALR----QKHVSELLAKREQLEAKMEDTQHEREKARLLAQVEHQLSITQKEQNVARIQRMEAYARQQLLQRIASADARSRAVKERKRALLQARQQVATEAMIRRHRLAEAVEKLRTTSTKW 512 The following BLAST results are available for this feature:
BLAST of NO08G00100 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00100 ID=NO08G00100|Name=NO08G00100|organism=Nannochloropsis oceanica|type=gene|length=1884bpback to top protein sequence of NO08G00100.1 >NO08G00100.1-protein ID=NO08G00100.1-protein|Name=NO08G00100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=628bpback to top Synonyms
Publications
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