NO08G00040, NO08G00040 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00040 vs. NCBI_GenBank
Match: EWM26490.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 748.4 bits (1931), Expect = 1.300e-212 Identity = 356/456 (78.07%), Postives = 394/456 (86.40%), Query Frame = 0
Query: 2 MLRRRSPFAIATTTLLAXXXXXXXPASVAADETATSMSSAYRPRRLRSVPSRQLQDAASLPKV---ADLCVAELDWTSEGGEILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNANTIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNEDFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYEKQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRL 455
ML RS AI ++ ++ P+ AD+T + + RLR+ +RQL A+ KV ADLCVA LDWTSEGGEIL+NGQP H+KG SYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFS ALAL PNKKVNANTIE ELH+LTA+ELIGNIIDKAAEY IL+MLDMHRLNEDFIPELWYDDKY+M DVK+AWDNLLTAFG+RWNLFAIDLKNEPHG ATWGSG TTDWNTAAE+LA YLY KHPQYKGLVF+EGTQLA+A+HHKLD NNKWWGGDLEGV+EFPIDLGSDALNK++VYSPHVYGPDAFVQPYF AKNFP NMP IWK QWAFVE++TDRAVVVGEWGG YE QDK+WQD+FAKF++DECLEDTFYWCLNPNSGDTGGLLDYDFLTP +KLALLAK+QP+PTF++ K QYCI+PGAYANPKCDKGRRL
Sbjct: 1 MLFHRSMDAI-SSVIVTFLLLTASPSFSNADDTMGGLVN--MNPRLRA--TRQLAKASGSSKVSTPADLCVASLDWTSEGGEILLNGQPFHLKGVSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTIEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNEDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQYCISPGAYANPKCDKGRRL 451
BLAST of NO08G00040 vs. NCBI_GenBank
Match: EWM26893.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 350.9 bits (899), Expect = 6.000e-93 Identity = 173/390 (44.36%), Postives = 242/390 (62.05%), Query Frame = 0
Query: 66 DLCVAELDWTSEGGEILVNGQPLHVKGTSYFGFET-PNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNANTIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNEDFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSA-KNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYEK----QDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCD 450
DL EL WT E+ VNG+ H+KG S+FG E + + GL + D+I FL + +FNA+R+PFS AL + V + +++ L+ + + I++AA++ ILVMLD HRLN+ IPELWY +YT +D+ AWD LL + WNLFAIDLKNEPHG ATWGSGN TDWNTAAE + K+L KHP++KGLVF+EG + + E +K PID G N+++VYSPH YGP +F+ NFP + + W+ W F+E++T A V+GEWGG Y+ +D VWQD FAK+++++C+ D F W LNP SGDTGG+L ++ + +KLAL +QP+P+++ K + + PG YANPKCD
Sbjct: 61 DLGKEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVRGYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGLGYSI---------------EFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWL-WKEGDTFYLEPGEYANPKCD 434
BLAST of NO08G00040 vs. NCBI_GenBank
Match: EWM20925.1 (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 337.8 bits (865), Expect = 5.300e-89 Identity = 157/362 (43.37%), Postives = 223/362 (61.60%), Query Frame = 0
Query: 72 LDWTSEGGEILVNGQPLHVKGTSYFGFETPNEVPHGLW---SVTRDQIFGFLRNESFNAVRLPFSAALAL---TPNKKVNANTIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNED-FIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYEKQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPT 427
L WTSE +LVN + +KG ++FGFETP++ HGLW S T L FNA+RLPFS LAL T + + L +LT+ +++ ++++A + ++VMLD HRL+ D I +LWYD+ Y + ++WD +L F WN+FA+DLKNEPHG +WGSG TDW A+E + +++ A HP ++GL F+ G WWGG+ V+E P+D+GS LN++VVY+PHVYGPD F Q YFS+ +FP N+PA+W W F+ + AVVV EWGG +D WQ+ A+++ ++ + D FYWCLNPNSGDTGG+L D+ T +KL LL +QP P+
Sbjct: 16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGI---------WGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPS 368
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58317.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58318.1 cellulase 2, partial [Pristionchus pacificus] >ADV58332.1 cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 315.1 bits (806), Expect = 3.700e-82 Identity = 162/385 (42.08%), Postives = 222/385 (57.66%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
ILVNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY+++Y T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ +LN +VVYSPH YGP + +P F+ +FP N+ I+ ++ F+ +T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVQVTDGPGTT 358
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58321.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58326.1 cellulase 2, partial [Pristionchus pacificus] >ADV58330.1 cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 314.7 bits (805), Expect = 4.800e-82 Identity = 162/385 (42.08%), Postives = 222/385 (57.66%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
ILVNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY++ Y+ T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ +LN +VVYSPH YGP + +P F+ +FP N+ I+ ++ F+ +T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNDYSE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNVDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVQVTDGPGTT 358
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58314.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58323.1 cellulase 2, partial [Pristionchus pacificus] >ADV58325.1 cellulase 2, partial [Pristionchus pacificus] >ADV58327.1 cellulase 2, partial [Pristionchus pacificus] >ADV58331.1 cellulase 2, partial [Pristionchus pacificus] >ADV58334.1 cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 314.3 bits (804), Expect = 6.300e-82 Identity = 161/385 (41.82%), Postives = 222/385 (57.66%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
ILVNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY+++Y T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ ++N +VVYSPH YGP + +P F+ +FP N+ I+ ++ F+ +T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVKVTDGPGTT 358
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58316.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58319.1 cellulase 2, partial [Pristionchus pacificus] >ADV58329.1 cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 313.2 bits (801), Expect = 1.400e-81 Identity = 160/385 (41.56%), Postives = 222/385 (57.66%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
I+VNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY+++Y T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ +LN +VVYSPH YGP + +P F+ +FP N+ ++ ++ F+ +T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYIEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVKVTDGPGTT 358
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58322.1 (cellulase 2, partial [Pristionchus pacificus] >ADV58335.1 cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 313.2 bits (801), Expect = 1.400e-81 Identity = 160/385 (41.56%), Postives = 222/385 (57.66%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
I+VNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY+++Y T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ +LN +VVYSPH YGP + +P F+ +FP N+ ++ ++ F+ +T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVQVTDGPGTT 358
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58328.1 (cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 313.2 bits (801), Expect = 1.400e-81 Identity = 160/385 (41.56%), Postives = 222/385 (57.66%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
I+VNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY+++Y T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ +LN +VVYSPH YGP + +P F+ +FP N+ ++ ++ F+ +T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 IIVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLEGMYMVKYGFIVNQTGQPVVVGEWGGRAEVGSRDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVQVTDGPGTT 358
BLAST of NO08G00040 vs. NCBI_GenBank
Match: ADV58320.1 (cellulase 2, partial [Pristionchus pacificus]) HSP 1 Score: 312.4 bits (799), Expect = 2.400e-81 Identity = 161/385 (41.82%), Postives = 221/385 (57.40%), Query Frame = 0
Query: 81 ILVNGQPLHVKGTSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSAALALTPNKKVNAN-TIETELHNLTAIELIGNIIDKAAEYDILVMLDMHRLNE-DFIPELWYDDKYTMKDVKQAWDNLLTAFGNRWNLFAIDLKNEPHGKATWGSGNDTTDWNTAAEDLAKYLYAKHPQYKGLVFIEGTQLATAEHHKLDTNNKWWGGDLEGVKEFPIDLGSDALNKKVVYSPHVYGPDAFVQPYFSAKNFPKNMPAIWKDQWAFVEKETDRAVVVGEWGGHYE--KQDKVWQDAFAKFIMDECLEDTFYWCLNPNSGDTGGLLDYDFLTPKVEKLALLAKIQPNPTFVSAKAPGQYCITPGAYANPKCDKGRRLQVKAATT 462
ILVNGQPL +KG +YFGFET PHG+WS + F++N +FNA+R+PFS + +N N L TA++L+ ID+AAE +L+MLD HR+ I ELWY+++Y T RWN+FAIDLKNEPH A+WG+ N TDWN AAE + L + GL F+EG + WG LE V +FPI+ G+ ++N +VVYSPH YGP + +P F+ +FP N+ I+ ++ F+ T + VVVGEWGG E +D W + +++ +C+ + FYWCLNPNS DTGGLL+ D+LTP K+ L + QPNPT A+ GQ CIT GA+ C G ++ TT
Sbjct: 1 ILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNFYLDFIKNNNFNAIRVPFSLEMVKNNPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNEYPE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSL----SSFLGLFFVEGIE---------------WGNRLENVAQFPINTGNPSVNNRVVYSPHCYGPSVYDRPEFNTPDFPNNLDGIYMVKYGFIVNLTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEGDWLTPIPRKINLTNRAQPNPTKFQAQ-NGQICITAGAFPEAHCQVGVKVTDGPGTT 358 The following BLAST results are available for this feature:
BLAST of NO08G00040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00040 ID=NO08G00040|Name=NO08G00040|organism=Nannochloropsis oceanica|type=gene|length=2313bpback to top protein sequence of NO08G00040.1 >NO08G00040.1-protein ID=NO08G00040.1-protein|Name=NO08G00040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=463bpback to top Synonyms
Publications
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