NO07G04690, NO07G04690 (gene) Nannochloropsis oceanica

Overview
NameNO07G04690
Unique NameNO07G04690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4184
Alignment locationchr7:1321447..1325630 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1321447..1325630 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04690.1NO07G04690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04690.1NO07G04690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04690 ID=NO07G04690|Name=NO07G04690|organism=Nannochloropsis oceanica|type=gene|length=4184bp
TTCAAGTCACATCTCTATCCCTTCCTCCTTTTTTCTTTCCTCCTTGTTCT
TCCTTCCCTTTTTCAATCCGCCACCTATGCTTAATCATTCATCGCCATCA
TCATTATCATCATGATCGTCGTCAATCTCATCGTCATTAGCAACATCGTA
AGCTCCATACCTCGTTATTTCCATCGCCTATTAATCGTTCTCTTCTGCTT
CGGCGTCGTCCTCCTTCTCCCCCTCCTTCGCCACCGACCCTCTAACCCTC
ATCCAAATGAAAGATCTTTTAAAATTCCTCCTTGTTATGTGTTCGTTATG
ACATGGCCTCTTTCGCCTCCGTAGCAGTCAGCCCCATGAAGTCAGAGAGG
GGCGTCTTTGTGTAGTCTTGGGAGGTCCTCTGTGGCGGTCGGCTGGATGC
CGAAAAGTCCTCTTCCTCTAACTCCTCACCTTCATCCCCCCCACCCCTCT
GTTGAAATGAAACCCCTCTAACATAACAATGATTGCATTTTTCTTATCTT
CAACTGGCGTAGCGTGCTCTTTGGTGTCCGCCATCTTATTCACTCACTTC
ATTGTCAGTAGGCCAGGGTCATCAAAGAGATAGGAGGGGTTTTCACAGTC
TCCAGTGTAATGGTACATGTCCTTCACAAAATGCTTAATCATATCCTCGC
GCAGAGGCCTCCTGCTCTTTGTTCCGTCCTCTGTCCAAGCAGCTCCACAG
CCGTGTGACCGCGGGGCAGCACAGGCCCCGCTTCTGCTTCCTCCATGTCC
CCTATCTCATTCTTCCTCTTATGACGGCGGGGTCAATCACACTAAGAGAA
TCACAGCCTTTGTTTTTTGTGGCGTGTAATCGTAGTTAGACAAAAAATAT
GAATAATTGCGAAGGATCTGAGTTGTTGTCGATTGCGGAATACTGAATAG
TCGTCCCTTGATGATTGCTGCACGACTGCGACGACTTATCGTCGTTGCTT
GCTAAAGATCATGTGTGGTGTGGGAGAATCGACGAGCATTTACCACACTC
CGCTTTTGGCTGTTAGCTAGCCTTATAATCATCTTCTCCTTCATTTTCTT
CCAACTTCAAGTCAATTGTCCCTCTTGGAGATCATGCACAACCGCAACTC
ATAGGGGAAGTCTACGAGAATCTTGTCAAATCTACCTCTATTGCGCCTTC
GACCTTTTCAATATCGTAAAAAATCCGCTGGGCGTAGGTGGTTAAAAGAC
AACCAGCATATCCGTTGATCGCTTCCTCTCGTAAAGTCTCCAAAACAAAT
TGACGGCCATGTTCACCAATCCTCTTGGCCATCCTCGGATGCTCTCTCAT
CCATTTGATATTATCTTCAAGGTCAGACAGGTCGCTTTTAAAGGGCACGT
AGTGTACAAACGGCTTCAGTGACGAATACCAGAATTCCATATAGTTGGAC
TCCTCCTTTAGCACCGTCGAGCCTAGTGCAAAAAGGAAGGGCAGTCGTGC
CGCCCAACCATTTCCATCCATGTTGATTATGTACTTGTAACGTCCGAATT
CCAACATCGATATTGCATCCCCCACGGCAGATGCGTTCAAAATGTCTTTT
CTGGCATCTTCTGTAACCTGAGTAAAGCCACTAAAACGAGCATCAATAAG
TTCAGAATGCTGTTGCGAAAATAGAACAAGTTGAGATCTCGGAAAATTTC
TCCAATTTTCTAGCGTATAAGCCCCTCCTGTTTGTGTTCCACGCCAGATT
GCTATATCTAGCTTCTTCTCCCAAGGTATGGCCGCCATCTCCTCTACCTC
TTTGCTTTCCATCCAGTCGTATATAGGTTGAGTAAAATTTTGCGTGAACA
TGGTCAAGTAAGTGAACGGTAGATCCAGATGACCATCTGTGGTCTGAAAA
GAGAATATTGGAGCTGGAAAATCATCGTAAGCCTTGGTTTCTTCAGCAGG
TTCATCCTTCAAGTTTACGATTATGTCAAAATCTGGAAAGTCGTAGTGAG
ATAACAGTATAGCGAATCGCCTGTATATGGCGTCGAGGTAGAGGCTGTGT
TTAAAGGTACAGTCGTTCAGAATGCTGTAAAGCGAATGATTTTTTTTAAA
ATGTTGAAGTCTTATGTAATTTTCACAGGGATACATTTCTTTCAACAACT
GCACACTCTCCTGTGTTATATGATCCCAATTTTGGAGAAAACGAAAGGCC
TCATCGCGCCAAATAGGCCACGTCGTAAGGCAGGGGTCACCCTTATGGTG
TCCCAAGAAATAAGGTGGTAAAGTATCACGGAGCTCCACCGTGGACGGAG
TCAAATTGTGAGATCCATGCGATATGATAGAGTTAGGACCGGGAAACAAT
AAGCATTTATCTGCCAAGATTAATAGAAGACATGCAAGTCCCACTCCAGC
GATAAGGCGTTTATGGAGAAGATACGTCTTTTCCAGCATTCCATTGAAGG
AATTTTAGCGAGGTAGTATGATGCAAGTCCGTAGATGCTATTATTTGATT
GTTAAAGTTGGTGATCAAATGAATTCGTTTCGACAAAAAAGCTAACGCGC
AAAGGAAAGTGTATTTATGCAATTCAACGGTGCAGGGGATTACTAGCCAC
CTGAATATAATAACCCTAACCCTAAATTTTGAGGTAAGAGTAGTATTAAA
ATATTGAGTCTATCTTTGGTATAAGCTACCGAGCTACCGAAGACAAGTGA
TAACAAAAGGACATGAATGGTCAATAATTCCCCCCCAAAAAGGTTTAATC
TAAGTATCTAAAGTATAAATCGATTTTTGTTGTCGCGCACTTAAAACGAT
TTCAGCGTTCTTCTCCTTCCACAAACCACTGAAGCACATGCCCGCTTAGC
AACACAAATGAAGAAGAATACAATGCACAAAACTCTATGTAGTCTTTGTG
ACGTCGTCCCGTGGTTTGTGTGGTTTTGAGCTTCCCGTCCCTCAATTTGG
AGTGTTCCGCGGCCCGCGGGTCCACAAATACTAATCGTTTCCCCTCCAAC
TCCCCTCGAGTCAACTTCCTCTTCTGTCAACCCCTCACAAATGAAATGAG
CGTGATAAGAGCGCACACCCATTTGCTGACCATGTACTGAGTGGCATTGC
TCCCTTTTCTGCCCTTCTCCATGTTTATCGAGTGGGGGATGGGGGGGTGG
AGGAGGGAGGGTGGAGAGTGGTATTGATGATGACGAAATTCCAAATATGG
CCATTTGCCATGGGCCATCTCCCAGACCGCTCCCCATTGCAACACAGCTC
AAAGCCCTTGTCCTACTCCCCCACCCTTACTCACAACATAGCACCGCCAT
GCCTGTTGTACACCAGGGGAATGAATGGTGGTCAAAACAACGGACTATAC
AAAAGGTTATgtaagtttttggctctttttacttctttggtgttttaata
accattatgagccttgccacatgcattgtgacatctccttctataatatt
ttgagcaccaaaataagcatgacggggttagggttagggttagggttatg
tatgtaatcctaaccctaaccctaaccctaaccctaacagAGAAAGAAAG
GTCATGTTAGTGGTGACAACGAAGAAGAGAATGATGCGTAGGAGTTTGGT
CGTGGGTGCCATCTTCAACGCACGACAACTCTTGGCAGCCAATTCACGAA
CGGCGACGATGATGCAATACAACCTCAGCCATGTGGAGTCGCATGCCAGG
GCCGTGGCCGTGGCCGAGGGCGACCAAGTAGGGGGCGACGGCGTACTAAT
CCTGTGCGGAGGCCACGCAACCAAATCGAGCGAGAAGATGACATACAAGG
CCGATTATGCCGGCGCTTGAATCCCGAAGTGCGGGCAGTAGAGCGAGATC
TCTATGCTGCACCAAGGTAACCTCGAGGCCCTCGATAAAGCACTACGGGA
CCTTATGGCCAACAAAGTTCACGGACCTTGCAAATCTTCTCTTCTGTGGA
ATAGTGGTGGGTTTTTCGGGGGATCTCCGTCAAATCCTCCCAGCGGTCCG
AGACGACGACCAAAATGCTACCGTACGCGCTTCCCTGATTTGCAGCCCTC
TCTGGCATCGTGCCCACGTCCTAACCCTGGAGGAAAACATGCGTATTCGT
GCGGCGTACGACGCGGGCCAGGATGCGACCCTTCACCAATGGTTTGCGGA
CCTCCTCCTCGCGGTCGGGGAAGGACGGGCACTACGGACTATACAGAAAG
TTATGTTAGTTTTTTGCTCTTTTTACTTTTTTGG
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protein sequence of NO07G04690.1

>NO07G04690.1-protein ID=NO07G04690.1-protein|Name=NO07G04690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=148bp
MAICHGPSPRPLPIATQLKALVLLPHPYSQHSTAMPVVHQGNEWWSKQRT
IQKVIERKVMLVVTTKKRMMRRSLVVGAIFNARQLLAANSRTATMMQYNL
SHVESHARAVAVAEGDQVGGDGVLILCGGHATKSSEKMTYKADYAGA*
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Synonyms
Publications