NO07G04620, NO07G04620 (gene) Nannochloropsis oceanica

Overview
NameNO07G04620
Unique NameNO07G04620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3459
Alignment locationchr7:1302238..1305696 -

Link to JBrowse

Properties
Property NameValue
DescriptionCyclin b2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1302238..1305696 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036915Cyclin-like_sf
IPR036047F-box-like_dom_sf
IPR006671Cyclin_N
IPR004367Cyclin_C-dom
IPR013763Cyclin-like
Homology
BLAST of NO07G04620 vs. NCBI_GenBank
Match: XP_005855426.1 (cyclin b2 [Nannochloropsis gaditana CCMP526] >EKU20933.1 cyclin b2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 401.4 bits (1030), Expect = 7.000e-108
Identity = 224/405 (55.31%), Postives = 264/405 (65.19%), Query Frame = 0
Query:  340 FSSSPVSPPRALRRPRLTKGNQSSCSFATTVSTKQEKKDGLQALPESVWQHALSFVPAKNLYAVMRTSRSFFTMTSPFEGIAATTGLLSITLPFSSLCPLFPIAEIPPLPEPWFDVHYFLSPPSLRPTPGFYHHWNLRAAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSA-XXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAASKMEPPAYG 744
            + S P     +   PR  KGN    + A      +   DGL  LPESVWQHA SFVPA +L +VM T+R F +M  PF+                                                  GFY HWNLRAAE+L   RPYISK RHLNAKMRAILLDWVTDVHQSLSF PATL+RTA VLD FLSRT+NVTREKLQLVGVTAFM+AAKG+E +PP+ DDCAYWTDNAYSG EVS ME R+LK L  S          A DFL+LYLKE  AGKL++CRAQYYCERTLQEHDMLSF PSLIAA S++LALK++  P      +   +   P S W  +++ YSGY++ ++AACARR+C+HV+ TVTTLSGRKLDAVKRK+A G+FLA S+MEPP +G
Sbjct:  283 YKSGPCPKHASYDLPRTIKGNPGGITRA-----GKPPDDGLLVLPESVWQHAFSFVPAHDLLSVMLTARPFCSMAEPFK--------------------------------------------------GFYFHWNLRAAESLQSLRPYISKLRHLNAKMRAILLDWVTDVHQSLSFAPATLYRTAQVLDQFLSRTENVTREKLQLVGVTAFMVAAKGVEHTPPDPDDCAYWTDNAYSGLEVSSMESRLLKVLSQSPFRPPSLPPTAQDFLTLYLKEVGAGKLASCRAQYYCERTLQEHDMLSFPPSLIAAASVILALKSSPIP----VVVHPCSTQKPKS-WTEAVAHYSGYSDTKVAACARRICQHVRHTVTTLSGRKLDAVKRKYANGLFLAVSRMEPPTWG 627          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: EWM26914.1 (cyclin b2 [Nannochloropsis gaditana])

HSP 1 Score: 401.4 bits (1030), Expect = 7.000e-108
Identity = 224/405 (55.31%), Postives = 264/405 (65.19%), Query Frame = 0
Query:  340 FSSSPVSPPRALRRPRLTKGNQSSCSFATTVSTKQEKKDGLQALPESVWQHALSFVPAKNLYAVMRTSRSFFTMTSPFEGIAATTGLLSITLPFSSLCPLFPIAEIPPLPEPWFDVHYFLSPPSLRPTPGFYHHWNLRAAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSA-XXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAASKMEPPAYG 744
            + S P     +   PR  KGN    + A      +   DGL  LPESVWQHA SFVPA +L +VM T+R F +M  PF+                                                  GFY HWNLRAAE+L   RPYISK RHLNAKMRAILLDWVTDVHQSLSF PATL+RTA VLD FLSRT+NVTREKLQLVGVTAFM+AAKG+E +PP+ DDCAYWTDNAYSG EVS ME R+LK L  S          A DFL+LYLKE  AGKL++CRAQYYCERTLQEHDMLSF PSLIAA S++LALK++  P      +   +   P S W  +++ YSGY++ ++AACARR+C+HV+ TVTTLSGRKLDAVKRK+A G+FLA S+MEPP +G
Sbjct:  283 YKSGPCPKHASYDLPRTIKGNPGGITRA-----GKPPDDGLLVLPESVWQHAFSFVPAHDLLSVMLTARPFCSMAEPFK--------------------------------------------------GFYFHWNLRAAESLQSLRPYISKLRHLNAKMRAILLDWVTDVHQSLSFAPATLYRTAQVLDQFLSRTENVTREKLQLVGVTAFMVAAKGVEHTPPDPDDCAYWTDNAYSGLEVSSMESRLLKVLSQSPFRPPSLPPTAQDFLTLYLKEVGAGKLASCRAQYYCERTLQEHDMLSFPPSLIAAASVILALKSSPIP----VVVHPCSTQKPKS-WTEAVAHYSGYSDTKVAACARRICQHVRHTVTTLSGRKLDAVKRKYANGLFLAVSRMEPPTWG 627          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: CBJ27441.1 (Cyclin B1 [Ectocarpus siliculosus])

HSP 1 Score: 157.9 bits (398), Expect = 1.300e-34
Identity = 100/256 (39.06%), Postives = 139/256 (54.30%), Query Frame = 0
Query:  480 EALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAAS 736
            E  + P  Y+  Q  +N KMRAIL+DW+ +VH        TL+ T +++D F  + +NV R KLQLVGVTA +IA K  E  P E  DC Y TD+AY+ EEV +ME  +L+ L               FL  +LK A A      RAQYY ER LQEH+ LSF PS++AA S+ LA        +P + ++++        WP +L+++     E +  CAR + + +     T S R L AVK+KF G  FLA +
Sbjct:  239 EEKYTPTVYMHTQVDINCKMRAILIDWIVEVHLKFKLADPTLYLTCHIIDRFCMQ-ENVHRSKLQLVGVTALLIACKYEEIFPTEVRDCVYITDHAYTREEVLEMEQTILRRL----KFELTVPTQWTFLVRFLKIAKATDRQHHRAQYYLERCLQEHEALSFRPSMLAAASVFLA-------RIPDSGIKNA--------WPDALAKFCNTPREGLECCARLMIKFLLDEPVTASQRHLVAVKKKFLGERFLAVA 474          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: XP_005856122.1 (cyclin B [Nannochloropsis gaditana CCMP526] >EKU20258.1 cyclin B [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 137.1 bits (344), Expect = 2.500e-28
Identity = 92/268 (34.33%), Postives = 133/268 (49.63%), Query Frame = 0
Query:  471 YHHWNLRAAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAASKME 739
            Y H+  +     + P  Y+ KQ ++N +MRAIL+DW+ +VH      P TL+ T  ++D FL R   V R KLQLVGVTAF+IA K  E  PPE  +  Y TD AY+ +++  ME  ML  L               FL  +LK   A       A Y  ERTLQE D+L F PS++AA ++ LA K           +RS         W  +L+ Y+ Y+E+ +  C R +   + +   T     L A+++K+    F+  S +E
Sbjct:   69 YSHYREKECRPGYDP-GYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDR-KQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHC----FLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKN--------CGMRS---------WSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQT-----LQAIRKKYGAAKFMMVSSLE 308          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: EWM25863.1 (Cyclin [Nannochloropsis gaditana])

HSP 1 Score: 137.1 bits (344), Expect = 2.500e-28
Identity = 92/268 (34.33%), Postives = 133/268 (49.63%), Query Frame = 0
Query:  471 YHHWNLRAAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAASKME 739
            Y H+  +     + P  Y+ KQ ++N +MRAIL+DW+ +VH      P TL+ T  ++D FL R   V R KLQLVGVTAF+IA K  E  PPE  +  Y TD AY+ +++  ME  ML  L               FL  +LK   A       A Y  ERTLQE D+L F PS++AA ++ LA K           +RS         W  +L+ Y+ Y+E+ +  C R +   + +   T     L A+++K+    F+  S +E
Sbjct:   92 YSHYREKECRPGYDP-GYMKKQPYINVRMRAILVDWLVEVHYKFKCCPETLYLTVNLIDRFLDR-KQVPRPKLQLVGVTAFLIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHC----FLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKN--------CGMRS---------WSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQT-----LQAIRKKYGAAKFMMVSSLE 331          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: XP_009033498.1 (hypothetical protein AURANDRAFT_12473, partial [Aureococcus anophagefferens] >EGB12480.1 hypothetical protein AURANDRAFT_12473, partial [Aureococcus anophagefferens])

HSP 1 Score: 136.0 bits (341), Expect = 5.500e-28
Identity = 90/257 (35.02%), Postives = 133/257 (51.75%), Query Frame = 0
Query:  471 YHHWNLRAAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFA 728
            Y H+  +  E    P  Y+S+Q H+N KMRAIL+DW+ +VH     +P TL+ T  ++D +L  +  V R  LQLVGV+A ++A+K  E  PPE  D  Y TD AY+ E++  ME +M+KAL               F+  YLK   A +     A Y  ER LQE+ ML + PS++AA ++ +A K   N G               + W  +L  Y+ YTE  + AC     E + + + +  G  L AVK+K++
Sbjct:   25 YAHFREKELETSVNP-TYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSP-VERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHC----FMMRYLKAGHADRRMVWLASYVAERMLQEYAMLKYLPSMVAACAVYIARK---NLG--------------RNAWSPTLLHYAQYTESSLRAC----LEEMSSVIHSTKG-SLQAVKKKYS 253          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: XP_002167647.1 (PREDICTED: G2/mitotic-specific cyclin-B [Hydra vulgaris])

HSP 1 Score: 136.0 bits (341), Expect = 5.500e-28
Identity = 93/253 (36.76%), Postives = 130/253 (51.38%), Query Frame = 0
Query:  485 PRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLS--GRKLDAVKRKFAGGVFLAAS 736
            P  Y++ Q  +N KMR+IL+DW+  V    + L  TL+ T Y++D +LS+  NV R +LQLVGVTA +IA+K  E   PE  D  Y TDNAYS E++ QME +MLK    +          L FL    K  +        A+Y  E TL E++ ++  PS IAA ++ LALK   +                 S W  +L+ YSGYTE+E+ +         K ++ TLS    K  AVK K++   FL  S
Sbjct:  153 PSDYMAHQAEINFKMRSILVDWLIQVQSRFNLLQETLYLTIYIIDRYLSK-QNVKRAELQLVGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKEKIRQMEQKMLK----TCEYDFSNPLCLHFLRRNSKAGAVDAQKHTLAKYLMELTLVEYEFITKLPSEIAAAALYLALKLIDD-----------------SNWTPTLAHYSGYTEDEILSTVS------KLSILTLSMDNSKYQAVKNKYSASKFLRIS 377          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: XP_009040697.1 (hypothetical protein AURANDRAFT_38949 [Aureococcus anophagefferens] >EGB04590.1 hypothetical protein AURANDRAFT_38949 [Aureococcus anophagefferens])

HSP 1 Score: 134.4 bits (337), Expect = 1.600e-27
Identity = 87/259 (33.59%), Postives = 129/259 (49.81%), Query Frame = 0
Query:  477 RAAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAAS 736
            R AE       Y+  Q+ +N KMR IL+DW+ +VH     L  T++ T  ++D +LS    + R +LQL+GV A  IA+K  E  PPE  DC Y TD+AY  ++V  ME+ +L+ L            A  +L    + A A K +A RA+Y+ +R LQE+ ML + PSL+AA +               A L   A       WP +  R +GYT+ E+  C + +  H+       + R+L A K+KF+   F   S
Sbjct:   95 RDAEEKRPMELYMEFQQDINPKMRGILVDWLVEVHLKFKMLQPTIYLTVQIIDRYLS-AKQIDRNQLQLLGVAALFIASKYEEIYPPEVADCTYITDHAYDAQDVLDMEMTILREL----DWNISSPSAHHWLVRLARVARAPKSAADRAEYFAQRMLQEYAMLEYKPSLLAAAA---------------AHLAFVADEGCDDGWPRACERLTGYTDVELYPCCKAISYHINRAAKDDAKRQLVACKKKFSRHDFSTVS 333          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: XP_024580294.1 (cyclin b [Plasmopara halstedii] >CEG43925.1 cyclin b [Plasmopara halstedii])

HSP 1 Score: 134.4 bits (337), Expect = 1.600e-27
Identity = 86/250 (34.40%), Postives = 135/250 (54.00%), Query Frame = 0
Query:  488 YISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEA-SAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSG-RKLDAVKRKFAGGVFLAAS 736
            Y+++Q  +N+KMRAIL+DW+ DVH     LP TLH   +++D+FL +  +V R++LQLVGVTA  IA+K  E  PPE +D    TD+AY+ EEV QME +ML  +            A  F+  ++K + +        A Y  +RTLQE+ ++ + PS IAA+++ +A              R+    +P+  W ++L  +S Y+E  +  C   + E +      +    KL A +RKF+   FLA +
Sbjct:  259 YMARQSDINSKMRAILVDWLVDVHYKYGLLPQTLHIAVHLIDYFLEKNLSVGRQRLQLVGVTAMFIASKYEEIFPPEAEDFVKITDSAYTREEVFQMEAKMLATI----GFRVTFPTAFQFMKRFIKASRTCDDRVEHFAHYVIDRTLQEYKLMKYLPSTIAASAVYVA--------------RTQMRDTPA--WSSTLEYHSSYSERSLTPCVDDLMEMLWNAHNGVGKLAKLTAARRKFSKERFLAVA 488          
BLAST of NO07G04620 vs. NCBI_GenBank
Match: P51988.1 (RecName: Full=G2/mitotic-specific cyclin-B >CAA62472.1 cyclin B, partial [Hydra vulgaris])

HSP 1 Score: 133.7 bits (335), Expect = 2.700e-27
Identity = 92/253 (36.36%), Postives = 129/253 (50.99%), Query Frame = 0
Query:  485 PRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSAXXXXXXXXALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLS--GRKLDAVKRKFAGGVFLAAS 736
            P  Y++ Q  +N KMR+IL+DW+  V    + L  TL+ T Y++D +LS+  NV R +LQL GVTA +IA+K  E   PE  D  Y TDNAYS E++ QME +MLK    +          L FL    K  +        A+Y  E TL E++ ++  PS IAA ++ LALK   +                 S W  +L+ YSGYTE+E+ +         K ++ TLS    K  AVK K++   FL  S
Sbjct:  120 PSDYMAHQAEINFKMRSILVDWLIQVQSRFNLLQETLYLTIYIIDRYLSK-QNVKRAELQLEGVTAMLIASKYEEMYAPEIGDFVYITDNAYSKEKIRQMEQKMLK----TCEYDFSNPLCLHFLRRNSKAGAVDAQKHTLAKYLMELTLVEYEFITKLPSEIAAAALYLALKLIDD-----------------SNWTPTLAHYSGYTEDEILSTVS------KLSILTLSMDNSKYQAVKNKYSASKFLRIS 344          
The following BLAST results are available for this feature:
BLAST of NO07G04620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855426.17.000e-10855.31cyclin b2 [Nannochloropsis gaditana CCMP526] >EKU2... [more]
EWM26914.17.000e-10855.31cyclin b2 [Nannochloropsis gaditana][more]
CBJ27441.11.300e-3439.06Cyclin B1 [Ectocarpus siliculosus][more]
XP_005856122.12.500e-2834.33cyclin B [Nannochloropsis gaditana CCMP526] >EKU20... [more]
EWM25863.12.500e-2834.33Cyclin [Nannochloropsis gaditana][more]
XP_009033498.15.500e-2835.02hypothetical protein AURANDRAFT_12473, partial [Au... [more]
XP_002167647.15.500e-2836.76PREDICTED: G2/mitotic-specific cyclin-B [Hydra vul... [more]
XP_009040697.11.600e-2733.59hypothetical protein AURANDRAFT_38949 [Aureococcus... [more]
XP_024580294.11.600e-2734.40cyclin b [Plasmopara halstedii] >CEG43925.1 cyclin... [more]
P51988.12.700e-2736.36RecName: Full=G2/mitotic-specific cyclin-B >CAA624... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL104nonsL104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008402NSK008402Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04620.3NO07G04620.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G04620.2NO07G04620.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G04620.1NO07G04620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|340978gene_2811Nannochloropsis oceanica (N. oceanica CCMP1779)gene
cycB1gene3626Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04620.3NO07G04620.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G04620.2NO07G04620.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G04620.1NO07G04620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04620 ID=NO07G04620|Name=NO07G04620|organism=Nannochloropsis oceanica|type=gene|length=3459bp
TTACTTTATTCTTCACGCTTTACTTTTTAGTCTCGGTAAGGCTTTCGAAA
GCTTGGGATGCGAAGTGGATGTCGTGATTGACACATGTATAATCCTGCTT
TAAAAGCCGATCCACCGCTGCCCAAGCCATAAATTTTCTTTCTGTTTGTG
CGATCAGACTGTGGGTTGTGGAGACGCGGCGGCCACTGTTGGTCTATCGT
CCTTGGGGGCCATGCGAAAAGCAACCCTGGGTCGGGCCCAAGTCTCGCTC
CCTCTTTATGCACTTCACTTTTTTCTCTCACTCACAGTCACGCACGTCTC
CTTTCTTAAATCACGCTACCACAATCATGTACAGCATGACTAAAGATAGA
GGGGGCGGAGGCGGGGGCGTGGGAGTCACGTCAAAGCGCAACACTCGCAG
CTCCAGCAATCCAAGTGCCACTGCGGCAGGTGCTCATCAACATGCCGTCG
GCCTCTCCAACACAAGGACCACCACAACCACGACCACAAGAGGTATGACG
CGGCAGCGTCAGCACCAGCACAAGGAGCATGTGCCGCCACAATTGCTAGT
GCAGCCGCCCCTCTGGCAACATCCCAAAATCATCAACACGAGCAGCAGCA
CCAGCAGCAGCACTAGCACCAGCAGAAGCAGCAGCAGTAGTAGCAGTGGC
GGTAATGGCGGCGGCAGTCATCCCCCCTCCCTCATCCTATTGCAGGCGCA
ATGCCTGCAAGTGGCCCTCCAAGGAATTTCGCACACCGGTTCCCCCACTT
CGTCCTCCGTCTCCCCTTTCCTCAGCGGACAGGAACGTGACGCTCTCCGC
CGTCTTGCTGTCTACCTACTCAGCTTGACGGTGCCCAAAGAGGGCAGCAA
GGATGGAGAGGAACAAGTAGAGCAACAGCAGACGATTAAAGGTGGAGAGC
CATCACTTATGGAGGTGGTGGTAGCGGATGGCGAGGAGGTGATGGGAGAT
GAAGCGCAGATGCCAGGCAACGTGGGCCCCAGGCGGCAGCCACTTCAGCA
CGCCCGAGCTCCCGAAAGACAGGAAGAGAAAGGAAGCGATTGCAGCATTA
CATATAGTGGCGATAGAGGCCGTAACAGGAAGGGCAGAGTCAAGGGCAAG
GAGCGGTTGCACGCACAGCCAGCATTACAGCAAGCAGCCACTCTTTCGTT
CGAGGCTGCCGCCTTCTCTTCTTCCTTCCCGTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCATCCTCCTCCTCTTCTTCC
TCCTCATCCTCCTCTAGTGCCACACGCCTGAAGAGGCCAAGCATTCGCAC
CACTTCCACTCCTACTTCCGAAGGATGGCTGATCGGCCCCTCCTTTTCCT
CTTCGCCTGTCTCCCCTCCCCGCGCCTTGCGGCGTCCCCGCCTGACCAAA
GGCAACCAGTCCTCGTGCTCTTTCGCCACAACAGTGTCCACCAAGCAAGA
AAAAAAGGACGGACTGCAGGCTTTGCCCGAGTCGGTATGGCAGCACGCCT
TGTCCTTCGTCCCAGCTAAGAACCTGTATGCCGTCATGCGCACCTCCAGG
TCCTTCTTCACCATGACATCGCCCTTCGAAGgtatcgccgctaccacggg
cttgctttcaatcaccctccctttctcttctctctgtccgctcttcccca
tagctgaaattccacctcttcccgagccgtggtttgacgttcactatttc
ctatcccctccgtccctccgccccaccccagGTTTTTACCACCACTGGAA
TCTTCGCGCCGCGGAGGCGCTCCACCGTCCTAGACCCTACATCAGCAAGC
AAAGACACTTGAATGCCAAAATGCGAGCTATTCTATTGGACTGGGTCACA
GACGgtatagagagagggagggaaggagggaaggagggtgatgcgctttc
cttcaactcgattgttttactcaagtcacgtttatgtctctcgccctttc
tctccctcgctgcctcctagTGCATCAGTCCCTGTCCTTCCTGCCGGCCA
CTTTGCACAGGACCGCGTACGTGCTTGATCATgtaaggagggagggggga
tgagagggagaagaggggggaggggggagggggacatgcaactggctcat
agacccaccgacacactctcccttcctccccttcttcctcccccgcaccc
tgtctgcctcagTTCTTGAGCCGCACCGACAATGTGACGCGGGAGAAGCT
GCAGCTGGTGGGTGTCACGGCCTTCATGATAGCGGCGAAAGGGATCGAGG
CATCTCCGCCCGAGCACGACGACTGCGCGTACTGGACCGACAACGCCTAC
AGCGGGGAGGAGGTTAGCCAGATGGAGATTCGGATGCTCAAGGCTCTGCC
TCCGTCCGCTCGCCCGCCCTCCCTCCCTCCCACCGCCCTGGACTTCTTGT
CACTGTACCTGAAGGAGGCAAGCGCGGGCAAGCTCTCCGCCTGCCGCGCC
CAATACTACTGCGAGCGCACCCTCCAAGAACACGACATGCTCTCCTTCGC
TCCCTCCCTCATCGCCGCCACCTCCATCCTTCTGGCCCTCAAGACGAACT
CCAACCCTGGCCTGCCCTTTGCGTCCCTCCGTTCCTCCGCCCCGCCCTCC
CCCTCTTCATACTGGCCGGCATCCCTGTCGCGCTACTCAGGCTACACAGA
AGAGGAGATGGCGGCGTGTGCGCGGCGGGTGTGTGAGCACGTCAAGACCA
CGGTGACTACCCTTTCGGGCCGCAAGCTCGATGCTGTCAAGAGAAAGTTC
GCGGGGGGCGTGTTCCTGGCAGCCAGCAAAATGGAACCTCCTGCCTATGG
AGAGGGGGATGGAGGCGGAGGCGGAGGTGGAGGAGGAGGAGGAGGAGGAG
GAGGAGAAGGAGGAGGAGGAGGGGGAGAAAATATGCCTGTGGTTGGAGGG
GAGGACATAGCGGTGATGGGGGGAGGGGTAGTGATGGGAGGAGGAGAAGC
AGCAGGAGGAGGAGGAGGAGCAGGAGGAGGAGCGGTGGCAGCAGCAGCAG
CAGCAGCAGCAGCGGTAGGAGGAGCAGGTGTGGTGGCCGGGGAGATGGGA
CAATTGTAGGGAGGGAGGACAAACGAGAAAGAGGAACATCGCAGGGAGGG
AGGGAAGGAAGGAAGGTAGTGAAGGGAGGAATATAGTAGGGAGGGAGGAG
GGGAAGGGTATGATAGGAGGAAGGGAAGGTGATGAAAGTGAAGTAAGTAG
TGTAAGTGTTGTCAACAGCAAAAGAAATAAAGGAGAGGAAGAAGGGGATC
GTACAATTTAATGAAGGTGAAGGGGGAACAGAAAAATGAGAAAGAGGCAA
ATTTCAAAAAGCAGACAAAGACACCTCACAACCACCGAATGAGAAGAAGG
GCGAGCACCAGCACTTGCCAAGGCAAAACTTGACCTCCCCCTGGCACCAC
GCACAGAGAGTGTGTACACTAGCTAGGCAACGAAAGAATTTTTAGAAAAA
CACATCAAG
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protein sequence of NO07G04620.3

>NO07G04620.3-protein ID=NO07G04620.3-protein|Name=NO07G04620.3|organism=Nannochloropsis oceanica|type=polypeptide|length=802bp
MHFTFFSHSQSRTSPFLNHATTIMYSMTKDRGGGGGGVGVTSKRNTRSSS
NPSATAAGAHQHAVGLSNTRTTTTTTTRGMTRQRQHQHKEHVPPQLLVQP
PLWQHPKIINTSSSTSSSTSTSRSSSSSSSGGNGGGSHPPSLILLQAQCL
QVALQGISHTGSPTSSSVSPFLSGQERDALRRLAVYLLSLTVPKEGSKDG
EEQVEQQQTIKGGEPSLMEVVVADGEEVMGDEAQMPGNVGPRRQPLQHAR
APERQEEKGSDCSITYSGDRGRNRKGRVKGKERLHAQPALQQAATLSFEA
AAFSSSFPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSATRLKRPSIRTTS
TPTSEGWLIGPSFSSSPVSPPRALRRPRLTKGNQSSCSFATTVSTKQEKK
DGLQALPESVWQHALSFVPAKNLYAVMRTSRSFFTMTSPFEGFYHHWNLR
AAEALHRPRPYISKQRHLNAKMRAILLDWVTDVHQSLSFLPATLHRTAYV
LDHFLSRTDNVTREKLQLVGVTAFMIAAKGIEASPPEHDDCAYWTDNAYS
GEEVSQMEIRMLKALPPSARPPSLPPTALDFLSLYLKEASAGKLSACRAQ
YYCERTLQEHDMLSFAPSLIAATSILLALKTNSNPGLPFASLRSSAPPSP
SSYWPASLSRYSGYTEEEMAACARRVCEHVKTTVTTLSGRKLDAVKRKFA
GGVFLAASKMEPPAYGEGDGGGGGGGGGGGGGGGEGGGGGGENMPVVGGE
DIAVMGGGVVMGGGEAAGGGGGAGGGAVAAAAAAAAAVGGAGVVAGEMGQ
L*
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protein sequence of NO07G04620.2

>NO07G04620.2-protein ID=NO07G04620.2-protein|Name=NO07G04620.2|organism=Nannochloropsis oceanica|type=polypeptide|length=548bp
MYSMTKDRGGGGGGVGVTSKRNTRSSSNPSATAAGAHQHAVGLSNTRTTT
TTTTRGMTRQRQHQHKEHVPPQLLVQPPLWQHPKIINTSSSTSSSTSTSR
SSSSSSSGGNGGGSHPPSLILLQAQCLQVALQGISHTGSPTSSSVSPFLS
GQERDALRRLAVYLLSLTVPKEGSKDGEEQVEQQQTIKGGEPSLMEVVVA
DGEEVMGDEAQMPGNVGPRRQPLQHARAPERQEEKGSDCSITYSGDRGRN
RKGRVKGKERLHAQPALQQAATLSFEAAAFSSSFPSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSATRLKRPSIRTTSTPTSEGWLIGPSFSSSPVSPPRA
LRRPRLTKGNQSSCSFATTVSTKQEKKDGLQALPESVWQHALSFVPAKNL
YAVMRTSRSFFTMTSPFEGIAATTGLLSITLPFSSLCPLFPIAEIPPLPE
PWFDVHYFLSPPSLRPTPGFYHHWNLRAAEALHRPRPYISKQRHLNAKMR
AILLDWVTDGIERGREGGKEGDALSFNSIVLLKSRLCLSPFLSLAAS*
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protein sequence of NO07G04620.1

>NO07G04620.1-protein ID=NO07G04620.1-protein|Name=NO07G04620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=829bp
MYSMTKDRGGGGGGVGVTSKRNTRSSSNPSATAAGAHQHAVGLSNTRTTT
TTTTRGMTRQRQHQHKEHVPPQLLVQPPLWQHPKIINTSSSTSSSTSTSR
SSSSSSSGGNGGGSHPPSLILLQAQCLQVALQGISHTGSPTSSSVSPFLS
GQERDALRRLAVYLLSLTVPKEGSKDGEEQVEQQQTIKGGEPSLMEVVVA
DGEEVMGDEAQMPGNVGPRRQPLQHARAPERQEEKGSDCSITYSGDRGRN
RKGRVKGKERLHAQPALQQAATLSFEAAAFSSSFPSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSATRLKRPSIRTTSTPTSEGWLIGPSFSSSPVSPPRA
LRRPRLTKGNQSSCSFATTVSTKQEKKDGLQALPESVWQHALSFVPAKNL
YAVMRTSRSFFTMTSPFEGIAATTGLLSITLPFSSLCPLFPIAEIPPLPE
PWFDVHYFLSPPSLRPTPGFYHHWNLRAAEALHRPRPYISKQRHLNAKMR
AILLDWVTDVHQSLSFLPATLHRTAYVLDHFLSRTDNVTREKLQLVGVTA
FMIAAKGIEASPPEHDDCAYWTDNAYSGEEVSQMEIRMLKALPPSARPPS
LPPTALDFLSLYLKEASAGKLSACRAQYYCERTLQEHDMLSFAPSLIAAT
SILLALKTNSNPGLPFASLRSSAPPSPSSYWPASLSRYSGYTEEEMAACA
RRVCEHVKTTVTTLSGRKLDAVKRKFAGGVFLAASKMEPPAYGEGDGGGG
GGGGGGGGGGGEGGGGGGENMPVVGGEDIAVMGGGVVMGGGEAAGGGGGA
GGGAVAAAAAAAAAVGGAGVVAGEMGQL*
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Synonyms
Publications