NO07G04600, NO07G04600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04600 vs. NCBI_GenBank
Match: EWM26918.1 (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 469.5 bits (1207), Expect = 1.500e-128 Identity = 232/268 (86.57%), Postives = 248/268 (92.54%), Query Frame = 0 Query: 322 SAVAGRSPSSGGSGGLQMISSMFRWRGGKSEDGEEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAAGRRELQSRMTVARDWMSDETLGAYIGEAPAGGG 590 S A +S +S +G L+MISSMFRWRGGK+ED EEVLVNIESPSANVRRISSSIV+NRP+ DVW+ILTDY+NL+EYVPNLTQSRLV TP GW+ R KNKEVRLFQEGAQTI+GFNFKASLTMDMEEVFE DEKLGQRRIKFRLVDSAMFSDFSGEWRLQ YSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPW+CEQDQAALAALAAGRRE Q+RMTVA+DWMSDETLGAYIG+ GGG Sbjct: 177 SVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMFSDFSGEWRLQCYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGGG 444
BLAST of NO07G04600 vs. NCBI_GenBank
Match: CBJ27904.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 214.5 bits (545), Expect = 8.800e-52 Identity = 106/194 (54.64%), Postives = 143/194 (73.71%), Query Frame = 0 Query: 346 WRGGKSEDGEEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMR-TACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASE 539 W GG+ G EV VNIE S N RRIS SIV+NRP++DVW LTDYD LA+YVPNLTQS++ +P S + +RL+QEGAQ I+GF+F+AS+ M MEE F D + ++ QR++ F L+DS MF++F GEWR+Q+ SR + + E+ Y+TKLFYMV+++PKGPVPV ALEW+I +VP NL A+K+A+E Sbjct: 3 WSGGRRTQGNEVTVNIERTSRNSRRISGSIVVNRPIEDVWLTLTDYDRLAKYVPNLTQSKV-------RP-SNDGGIRLWQEGAQKIVGFDFRASVEMFMEEHFGDPENRMAQRKLTFGLLDSRMFNEFDGEWRMQFNSRKQFNTAQGPEYQYTTKLFYMVHIRPKGPVPVLALEWQISNEVPNNLAALKLAAE 188
BLAST of NO07G04600 vs. NCBI_GenBank
Match: CEM39765.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 209.1 bits (531), Expect = 3.700e-50 Identity = 115/250 (46.00%), Postives = 153/250 (61.20%), Query Frame = 0 Query: 355 EEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNK----EVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYS---RMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAAGR------------RELQSRMTVARDWMSDETLGAYIGEAP 586 + V VNIE P+ANVRRIS S++++ ++D W ILTDYDNLA +VPNL S+ V P N ++RL+QEGAQ IIGF+F+A++TMDM EV D + ++ R I+F+L DS FS F GEW++Q ++ R A ++E +Y+TKLFY+V V+PKGPVPV ALEWRIKEDVPTNL+AVK A+EK+ + L G V + DETLG Y+ AP Sbjct: 144 DSVSVNIERPAANVRRISGSVIVDTSMEDCWSILTDYDNLAAHVPNLVVSQRVPLPRSLASSGLNGDDMWQMRLYQEGAQKIIGFDFRAAVTMDMREVLGDPENRMAPRLIEFKLADSQFFSQFDGEWKIQAHTRRVRRHPATGDDEISYTTKLFYVVTVRPKGPVPVMALEWRIKEDVPTNLKAVKQAAEKIARKVPASSPLLLRADEGEXXXXXXXXXXXXXXXXXXXEVDQGVQEDETLGVYMRNAP 393
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_005855430.1 (hypothetical protein NGA_0121600 [Nannochloropsis gaditana CCMP526] >EKU20937.1 hypothetical protein NGA_0121600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 188.0 bits (476), Expect = 8.800e-44 Identity = 92/117 (78.63%), Postives = 104/117 (88.89%), Query Frame = 0 Query: 322 SAVAGRSPSSGGSGGLQMISSMFRWRGGKSEDGEEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFK 439 S A +S +S +G L+MISSMFRWRGGK+ED EEVLVNIESPSANVRRISSSIV+NRP+ DVW+ILTDY+NL+EYVPNLTQSRLV TP GW+ R KNKEVRLFQEGAQTI+GFNFK Sbjct: 177 SVFARQSAASQRTGSLEMISSMFRWRGGKNEDEEEVLVNIESPSANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQTIVGFNFK 293
BLAST of NO07G04600 vs. NCBI_GenBank
Match: KOO25119.1 (cyclase dehydrase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 188.0 bits (476), Expect = 8.800e-44 Identity = 102/184 (55.43%), Postives = 126/184 (68.48%), Query Frame = 0 Query: 357 VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKL 541 V+V+I + N R IS+S++ + VW ILTDYDNLA +VPNL QSR P G +RLFQEGAQ I+GF+F+ASLTMDM EV E + L RI F LV+SAMF+ F GEWR+Q YSR+R+ + ++ Y +KL Y VN+ PKG VPV ALEWRI+EDVP NL AVK ASEKL Sbjct: 16 VVVDILTTGINSRCISASVIADAAPSKVWAILTDYDNLATHVPNLIQSRRRPHPTG--------GIRLFQEGAQKIVGFDFRASLTMDMTEVTE--EGALRPSRILFELVESAMFASFDGEWRVQPYSRVRSLADPSKYEYKSKLSYRVNITPKGLVPVPALEWRIREDVPVNLLAVKAASEKL 189
BLAST of NO07G04600 vs. NCBI_GenBank
Match: GAX21341.1 (hypothetical protein FisN_6Lh094 [Fistulifera solaris]) HSP 1 Score: 176.0 bits (445), Expect = 3.500e-40 Identity = 108/244 (44.26%), Postives = 143/244 (58.61%), Query Frame = 0 Query: 349 GKSEDGEEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAA---------GRRELQSRMTVARDWMSDETLGAYIGE 584 G ++ + V V IE PS + RRI I+ P+ DVW ILT YD+L+ +VPNL +SR+ P QP + E LFQ+GAQ I+GF F AS+TM M+E + E RRI F+ VDS F+ F GEW+ + R+ + TKL Y+V+V+PKGPVPV ALEWRI+EDVPTNLRAVK S L E Q Q L+ +A R +L + M ++ W DET+ AY+ E Sbjct: 60 GDADSCDLVPVRIERPSPSSRRIFGEIIAPVPLADVWSILTAYDDLSTHVPNLKESRITRRPPSGQPGDGSYECILFQKGAQKIVGFEFAASVTMKMKERYISESE----RRITFQCVDSMFFNAFDGEWKAE--ERI-----GADGMPETKLSYVVDVRPKGPVPVAALEWRIREDVPTNLRAVK-RSAALLSEKSQVQQTLSRPSAPSVNKRATSTRAQLMNNMKMSVKWYKDETMEAYLTE 291
BLAST of NO07G04600 vs. NCBI_GenBank
Match: GAX25868.1 (hypothetical protein FisN_6Hh094 [Fistulifera solaris]) HSP 1 Score: 175.3 bits (443), Expect = 5.900e-40 Identity = 103/244 (42.21%), Postives = 141/244 (57.79%), Query Frame = 0 Query: 349 GKSEDGEEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALA---------AGRRELQSRMTVARDWMSDETLGAYIGE 584 G ++ + V V IE PS + RRI I+ P+ DVW ILT YD+L+ +VPNL +SR+ P QP + E LFQ+GAQ I+GF F AS+TM M+E + E R+I F+ VDS F+ F GEW+ + R + + TKL Y+V+V+PKGPVPV ALEWRI+EDVPTNLRAVK ++ L + + Q A + R L + M ++ W DET+ AY+ E Sbjct: 60 GDADSCDLVPVRIERPSPSSRRIFGEIIAPVPLADVWSILTAYDDLSTHVPNLKESRITRRPPSGQPGDGSFECILFQKGAQKIVGFEFAASVTMKMKESYISASE----RKITFQCVDSMFFNAFDGEWK----AEERVSADGMP---ETKLSYVVDVRPKGPVPVAALEWRIREDVPTNLRAVKRSAALLSEQSQMPQTRSRPSAPSVNNQRASSTRARLMNDMKMSVKWYKDETMEAYLTE 292
BLAST of NO07G04600 vs. NCBI_GenBank
Match: EJK63276.1 (hypothetical protein THAOC_16079 [Thalassiosira oceanica]) HSP 1 Score: 172.9 bits (437), Expect = 2.900e-39 Identity = 116/273 (42.49%), Postives = 146/273 (53.48%), Query Frame = 0 Query: 346 WRGGK------SEDGEE---VLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKLGQ------------RRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQ-------AALAALAAGRRELQSRMTVARDWMSD-------ETLGAYIGE 584 W GG S GEE V V I+ SAN RRI IV+N + DVW ILTDYD L+ +VPNL S+ V+ +G +P + + RL+Q GAQ IIGF F A +TMDM E D + GQ RRI F+ VDS FS+F G WR+ E E T + Y V V+PKGPVPV ALEWRI+EDVPTNLRAVK A+ ++ +E Q + ALA L E + + + +D ETLGAY+ E Sbjct: 65 WFGGTPNESEISSSGEECELVAVRIDRTSANSRRIGGEIVVNASLLDVWSILTDYDRLSTHVPNLVASKRVSGGSG-EPGDGSYKCRLYQRGAQKIIGFQFGADVTMDMTEAVVDAGKASGQPAGADSKLFPQERRIDFKCVDSQFFSEFDGTWRVVEMPENAFTGEPE-----TTVSYTVEVRPKGPVPVAALEWRIREDVPTNLRAVKKAAIEVGYEGVQAEKDGNPIGKALARLNGSLNEKAQSASSSAEGFADFILDYENETLGAYLTE 331
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_005855431.1 (hypothetical protein NGA_0121700 [Nannochloropsis gaditana CCMP526] >EKU20938.1 hypothetical protein NGA_0121700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 171.0 bits (432), Expect = 1.100e-38 Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 0 Query: 499 TKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWECEQDQAALAALAAGRRELQSRMTVARDWMSDETLGAYIGEAPAGG 589 TKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPW+CEQDQAALAALAAGRRE Q+RMTVA+DWMSDETLGAYIG+ GG Sbjct: 5 TKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWDCEQDQAALAALAAGRREQQARMTVAQDWMSDETLGAYIGDLQGGG 94
BLAST of NO07G04600 vs. NCBI_GenBank
Match: XP_002181710.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46924.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 164.1 bits (414), Expect = 1.400e-36 Identity = 101/255 (39.61%), Postives = 137/255 (53.73%), Query Frame = 0 Query: 355 EEVLVNIESPSANVRRISSSIVINRPVQDVWRILTDYDNLAEYVPNLTQSRLVNTPAGWQPRSKNKEVRLFQEGAQTIIGFNFKASLTMDMEEVFEDVDEKL------------------GQRRIKFRLVDSAMFSDFSGEWRLQYYSRMRTACENEEWTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEKLPWE----CEQDQAALAALAAGRRELQSRMTVARD----WMSDETLGAYIGE 584 E V V IE S N R+I IV P++DVW ILTDYD L+ +VPNL +SR+V +G + N + RLFQ+GAQ I+GF F A LTM+M+E + L +RRI+F+ +S F +F GEW++ T E T L Y V+V+P GPVPV ALEWRI+EDVPTNLRAVK+A+ + ++ Q A+ R +R + D W +ET+ AY+ E Sbjct: 75 ELVPVRIERTSGNSRKIYGEIVAPVPLKDVWAILTDYDRLSTHVPNLVESRIVRPLSGGEMGDGNFQCRLFQKGAQKIVGFEFGADLTMEMKESIKPAPTILPSKPDATRQDANGASYPGNERRIQFKCCESFFFKEFDGEWKV-------TERTGETGLMETVLSYTVDVRPNGPVPVAALEWRIREDVPTNLRAVKLAAMTVGYKGVQASRQQGMQPASFGKSYRRNGARPGLIADLRVQWEPEETMAAYLKE 322 The following BLAST results are available for this feature:
BLAST of NO07G04600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04600 ID=NO07G04600|Name=NO07G04600|organism=Nannochloropsis oceanica|type=gene|length=5675bpback to top protein sequence of NO07G04600.2 >NO07G04600.2-protein ID=NO07G04600.2-protein|Name=NO07G04600.2|organism=Nannochloropsis oceanica|type=polypeptide|length=604bpback to top protein sequence of NO07G04600.1 >NO07G04600.1-protein ID=NO07G04600.1-protein|Name=NO07G04600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=655bpback to top Synonyms
Publications
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