NO07G04540, NO07G04540 (gene) Nannochloropsis oceanica

Overview
NameNO07G04540
Unique NameNO07G04540
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3279
Alignment locationchr7:1276677..1279955 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone acetyltransferase complex component
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1276677..1279955 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0140110transcription regulator activity
GO:0016740transferase activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeodomain-like
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_005855429.1 (histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526] >EKU20936.1 histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 270.4 bits (690), Expect = 1.000e-68
Identity = 172/186 (92.47%), Postives = 179/186 (96.24%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMD 187
            MPLRGDFDVEHDNEAELILAEMEILPDEDPAEK+LKLMVVDVFNRKLDER++RK FVK +NL DYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQA XXXXXXXXXXXXXXXXXXXXXXXXX LYE+AKP  +TKDRSSRYKKRHRG+SDMD
Sbjct:  291 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXLYESAKP--STKDRSSRYKKRHRGESDMD 474          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: EWM26926.1 (histone acetyltransferase complex component [Nannochloropsis gaditana])

HSP 1 Score: 238.0 bits (606), Expect = 5.800e-59
Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAD 132
            MPLRGDFDVEHDNEAELILAEMEILPDEDPAEK+LKLMVVDVFNRKLDER++RK FVK +NL DYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQA+
Sbjct:  266 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAE 396          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: CCA23969.1 (transcriptional adapter 2alpha putative [Albugo laibachii Nc14])

HSP 1 Score: 195.3 bits (495), Expect = 4.300e-46
Identity = 124/328 (37.80%), Postives = 180/328 (54.88%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSS--LIVMDVEKKKGVYDFMVRVGWI 327
            MPLRGDFDVE+DN+AE+IL++ME   D+ P E+ELKL V++++N KLDER RRK+FV    L DYK  Q  E+R+PK+ERE+IA++R FAR+ T +EHE  + G++ A RL+K+I  LQ+YRR GI+T A+        XXXXX            YLY++ +  +  KDR+SRY++R  G  D + +     D                       +      +D  PG  LL+  EKELC+ L++LPKHYL IK+ +++E                                + G   P ++  ++ +DVEK + +YDF V  GW+
Sbjct:  255 MPLRGDFDVEYDNDAEVILSDMEFAEDDTPTERELKLKVIEIYNSKLDERARRKQFVIEHGLLDYKKHQQTERRRPKEEREIIAQMRPFARFHTREEHEDLIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAEMYEQEKXXXXXELAMQKQRDDASYLYDSTRTNSNGKDRASRYRERLTGLHDDEGS-----DTSSNKRPRTGDSSEDNGRGVSKRIATS--LVDGAPGAHLLAPTEKELCSKLQILPKHYLVIKDVLIRECY------------------------------RLGYLTPDTARQIVKLDVEKSEDIYDFFVSCGWV 545          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_009538924.1 (hypothetical protein PHYSODRAFT_551398 [Phytophthora sojae] >EGZ05393.1 hypothetical protein PHYSODRAFT_551398 [Phytophthora sojae])

HSP 1 Score: 194.5 bits (493), Expect = 7.300e-46
Identity = 118/338 (34.91%), Postives = 177/338 (52.37%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI-----TPRAAAS 334
            MPLRGDFDVE+DNEAE+ILA+ME    + PAE+ELKL V+ ++N+KL++R  RK+FV    L DYK  Q+ E+++PK+EREL+A++R FAR+Q+P+EH+ FV G++ A RL+K+I  LQ+YR+ G+RT A+                         YLYE+ +  ++ +DR++R++ R +G             A                       +    +++  PG  LL+ KEKELC+ L+LLPKHYL IK+ +++E                                     +     + +DV K   VYDF V+ GW+     TP  +AS
Sbjct:  207 MPLRGDFDVEYDNEAEMILADMEFSEGDHPAERELKLKVIQIYNQKLEKRIERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQSPEEHDNFVEGLIAAMRLKKQILLLQEYRKNGVRTLAEAELYDADKKKRELDQAIQKQRDSASYLYESGRTSSSGRDRANRWQNRDQG-------------ANGDAGGDNSRTRGAASGAAGLNAIAATYSVEGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALVRECFRLGYLTK----------------------------KMAKETVQIDVNKTGQVYDFFVKCGWVKSENATPTVSAS 503          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: CCI41344.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 194.5 bits (493), Expect = 7.300e-46
Identity = 120/328 (36.59%), Postives = 173/328 (52.74%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSS--LIVMDVEKKKGVYDFMVRVGWI 327
            MPLRGDFDVE+DN+AE+IL++ME   D+ P E+ LKL V++++N KLDER RRK+FV    L DYK     E+R+PK+ERE+IA++R FAR+ T QEHE+ + G++ A RL+K+I  LQ+YRR GI+T A+                         YLY++ +     KDR+SRY++R  G  D D     + D                       +      +D  PG  LL+  EKELC+ L+LLPKHYL IK+ +++E                                + G   P ++  ++ +DVEK + +YDF V  GW+
Sbjct:  258 MPLRGDFDVEYDNDAEVILSDMEFAEDDSPTERALKLKVIEIYNSKLDERVRRKQFVIEHGLLDYKKHLQVERRRPKEEREIIAQMRPFARFHTRQEHEELIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAELYEQEKKKRETELAMQKQRDNASYLYDSTRSTYNGKDRASRYRERFTGLQDED-----VSDTSSNKRSRVDEAGEDAGRGTSKRIATS--LVDGAPGAHLLAPTEKELCSKLQLLPKHYLVIKDVLIRECY------------------------------RMGYLTPDAAQQIVKLDVEKSEDIYDFFVSCGWV 548          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_002998984.1 (transcriptional adapter 2-alpha, putative [Phytophthora infestans T30-4] >EEY69130.1 transcriptional adapter 2-alpha, putative [Phytophthora infestans T30-4])

HSP 1 Score: 193.7 bits (491), Expect = 1.200e-45
Identity = 118/333 (35.44%), Postives = 179/333 (53.75%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWITPRAAAS 334
            MPLRGDFDVE+DNEAE+ILA+ME    + PAE+ELKL V+ ++N+KL +R  RK+FV    L DYK  Q+ E+++PK+EREL+A++R FAR+QTP++HE+FV G++ A RL+K+I  LQ+YR+ G++T A+                         YLYE+ +   +++DR++R++ R +G     S+ AG E +                       +    +++  PG  LL+ KEKELC+ L+LLPKHYL IK+ +++E                                     +     + +DV K   VYDF V+ GW+    A +
Sbjct:  208 MPLRGDFDVEYDNEAEIILADMEFSEGDHPAERELKLKVIQIYNQKLAKRMERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEDHEKFVEGLITAMRLKKQILLLQEYRKNGVKTLAEAELYDAEKKKRELDQAIQKQRDSASYLYESGRT-TSSRDRANRWQNREQG----ASSDAGAESSR---------TRGSGAVAGGLNAIAATFSVEGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALVRECYRLGYL----------------------------SKKMAKETVQIDVNKTGQVYDFFVKCGWVKSENATT 498          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: OQS03942.1 (transcriptional adapter 2-alpha [Thraustotheca clavata])

HSP 1 Score: 193.4 bits (490), Expect = 1.600e-45
Identity = 121/338 (35.80%), Postives = 176/338 (52.07%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWITPRAAASRSDVK 339
            +PLRGDFDVEHDN+AELILA+ME   D+ P E+ELKL V+ ++N KLDER+RRK+FV    L DYK  Q  E+R+PK+ERE+IA++R FAR+ + ++H+ FV G++ A RLRK+I QLQ+YR  GIRT A+                         YLY++A+  +  + R+SR+  R + D +  +A +G+                                ID  PG  LL+ KEKELCA L+LLPK YL IK+ +++ES                                       ++++ +D  K   +YDF V  GW+     +S + ++
Sbjct:  160 LPLRGDFDVEHDNDAELILADMEFHDDDHPTERELKLKVISIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEEREIIAQVRPFARFHSKEDHDTFVSGLIAAMRLRKQIAQLQEYRMHGIRTLAEAEMFELDKKKKETEQALQKSRESAAYLYDSARNASGNRVRNSRWLNREQ-DGEKTNA-SGI--------------------------------IDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHLDV----------------------------NTATNMVHIDATKTGQIYDFFVHAGWVKKDGKSSLTKIR 435          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_008607118.1 (hypothetical protein SDRG_03265 [Saprolegnia diclina VS20] >EQC39057.1 hypothetical protein SDRG_03265 [Saprolegnia diclina VS20])

HSP 1 Score: 192.2 bits (487), Expect = 3.600e-45
Identity = 122/326 (37.42%), Postives = 170/326 (52.15%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI 327
            MPLRGDFDVEH+N+AELILA+ME   D+ P E+ELKL V+ ++N KLDER+RRK+FV    L DYK  Q  E+R+PK+ERELIA++R FAR+ + ++HE FV G+L A RLRK+I  LQ+YR+ GIRT A+                         YLY++++     + R+SR+  R   + D +SA +G+                                ID  PG  LL+ KEKELCA L+LLPK YL IK+ +++ES                                       +++I +D  K   +Y+F V  GW+
Sbjct:  157 MPLRGDFDVEHENDAELILADMEFHDDDHPTERELKLKVIAIYNAKLDERERRKKFVIAHGLLDYKKYQQVERRRPKEERELIAQVRPFARFHSKEDHETFVSGLLAAMRLRKQIALLQEYRKRGIRTLAEAEMYELDKKKRETEQALQKSRESAAYLYDSSRGPTANRQRNSRWLSR---EQDGESA-SGI--------------------------------IDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHL----------------------------DASTAANMIQIDATKTGQIYEFFVHAGWV 418          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: POM80833.1 (Transcriptional adapter 2-alpha, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 192.2 bits (487), Expect = 3.600e-45
Identity = 123/338 (36.39%), Postives = 179/338 (52.96%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI-----TPRAAAS 334
            MPLRGDFDVE DNEAE+ILA+ME    + PAE+ELKL V+ ++N KL +R  RK+FV    L DYK  Q+ E+++PK+EREL+A++R FAR+QTP+EH+ FV G++ A RL+K+I  LQ+YR+ G++T A+                         YLYE+ +  ++++DR++R++ R  G     S+ AG E++                       +    +I+  PG  LL+ KEKELC  L+LLPKHYL IK+ +++E                                     +     + +DV K   VYDF V+ GW+     TP  AAS
Sbjct:  482 MPLRGDFDVECDNEAEVILADMEFSDGDHPAERELKLKVIQIYNEKLAKRIERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEEHDNFVEGLIAAMRLKKQILLLQEYRKNGVKTLAEAELYDAEKKKRELDQAIQKQRDNASYLYESGRT-SSSRDRANRWQNREHG----ASSDAGGENSR------------TRGSAGGLNTIAATFSIEGTPGCHLLTPKEKELCCKLKLLPKHYLVIKDALVRECYRLGYLTK----------------------------KMAKETVQIDVNKTGQVYDFFVKCGWVKSESATPTVAAS 774          
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_012202422.1 (hypothetical protein SPRG_08061 [Saprolegnia parasitica CBS 223.65] >KDO26759.1 hypothetical protein SPRG_08061 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 191.4 bits (485), Expect = 6.200e-45
Identity = 122/326 (37.42%), Postives = 170/326 (52.15%), Query Frame = 0
Query:    1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI 327
            MPLRGDFDVEH+N+AELILA+ME   D+ P E+ELKL V+ ++N KLDER+RRK+FV    L DYK  Q  E+R+PK+ERELIA++R FAR+ + ++H+ FV G+L A RLRK+I  LQ+YR+ GIRT A+                         YLY++++     + RSSR+  R   + D +SA +G+                                ID  PG  LL+ KEKELCA L+LLPK YL IK+ +++ES                                       +++I +D  K   +Y+F V  GW+
Sbjct:  158 MPLRGDFDVEHENDAELILADMEFHDDDHPTERELKLKVIAIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEERELIAQVRPFARFHSKEDHDTFVSGLLAAMRLRKQIALLQEYRKRGIRTLAEAEMYELDKKKRETEQALQKSRESAAYLYDSSRGPTANRQRSSRWLSR---EQDGESA-SGI--------------------------------IDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHL----------------------------DAGTAANMIQIDATKTGQIYEFFVHAGWV 419          
The following BLAST results are available for this feature:
BLAST of NO07G04540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855429.11.000e-6892.47histone acetyltransferase complex component, parti... [more]
EWM26926.15.800e-5993.89histone acetyltransferase complex component [Nanno... [more]
CCA23969.14.300e-4637.80transcriptional adapter 2alpha putative [Albugo la... [more]
XP_009538924.17.300e-4634.91hypothetical protein PHYSODRAFT_551398 [Phytophtho... [more]
CCI41344.17.300e-4636.59unnamed protein product [Albugo candida][more]
XP_002998984.11.200e-4535.44transcriptional adapter 2-alpha, putative [Phytoph... [more]
OQS03942.11.600e-4535.80transcriptional adapter 2-alpha [Thraustotheca cla... [more]
XP_008607118.13.600e-4537.42hypothetical protein SDRG_03265 [Saprolegnia dicli... [more]
POM80833.13.600e-4536.39Transcriptional adapter 2-alpha, partial [Phytopht... [more]
XP_012202422.16.200e-4537.42hypothetical protein SPRG_08061 [Saprolegnia paras... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL104nonsL104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008410NSK008410Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04540.1NO07G04540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628772gene_2803Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100888g2gene3617Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04540.1NO07G04540.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04540 ID=NO07G04540|Name=NO07G04540|organism=Nannochloropsis oceanica|type=gene|length=3279bp
ATGCCCCTCCGTGGAGACTTTGACGTGGAGCATGACAACGAGgtccgtca
ccctccctcccttcctccctctttctctcgacatctactttcactccttc
cttccctgcctccctccctccctccttccctcttaacttacgatcctttt
cttctttccctccctcttgactcaaccctccctccctccctccctctctc
ccttccttcctccctctttacaatcccctcctcttctttccctccctccc
tcagGCCGAGCTGATCCTGGCAGAGATGGAGATATTACCGGACGAGGACC
CGGCGGAGAAGGAGCTCAAGCTCATGGTCGTCGACGTCTTCAACCGgtgc
gtgccctccctccctccctccctccctccctccctccctccctctctcct
tcccccttctaccttcctttgattttcacttcagtcccagactcgatcgt
gacgctccctccctccctccctccctccctccctccctccctccctccct
ccctccctccctccctccctccctccctccctccctccctccctccctcc
ctccctccctccctccctccctccctccctccctccctccctccctccct
ccagCAAGCTGGACGAGCGCGACCGGCGGAAGGAATTTGTAAAAACCTTC
AATTTGACCGACTACAAGGCCCTGCAGgtacgacaaacacctccctccct
ccctccctccctccctcccttctgtcctgatgcgcgtgttttctcgcact
cacattcaccctccctccctccctccctccctccctcctttcctccctcc
ttcccttcctttcccctcagAACAAGGAGAAACGCAAGCCCAAGGATGAA
CGCGAGCTCATCGCCAAACTCCGGGTATTCGCGCGCTACCAAACTCCGCA
AGAACACGAGCAGTTCGTCCTGgtacgcctttcccctccctccctccctc
ccttgttccctccctctcctctcgatgtctccatgaatcaacactcattt
tccctcccttactccctccctccctccctccctcccttcctccctccgcc
tccccctcagGGCATCTTGGAGGCCAAGCGCCTTCGGAAGCGGATCGAGC
AGCTCCAGCAATATCGGCGTCTCGGCATTCGCACCCAGgtacccctccct
ccctccctccctccctccctccctcgttctgacaacctccctcccttccc
ctcccccgcctcctgcagGCCGACGCCCTGGCCTACGAGAACGAGAAGCG
AAAACGGGAGCAAGAGCAGCAGATGCGCAAGCAGgtagggacgaaaggag
ggcagaggggagggggggctggctggcttagcggctatcacccgcagcta
aatgatattgctctgcgcttgtttgataggcttgttcggaccttgaacca
cctctctttccctccctccctcccctcttccctccctccctccctccctc
cctccctccctccctgcgtgagcgcgaggaagctccctctctgcctctgc
gaaaccgtcatatgcattctcacccctccctccctccctccctcagCGGG
CCGATGCGTCATATTTGTACGAGACGGCCAAACCCGGCAACACCACCAAA
GACCGATCTTCGCGCTACAAGAAGAGGCACCGAGGGGACAGCGACATGGA
CAGgtgagggagggagagagggagggaggaagggaggggcagatggttgt
ttccttccccttttggaaggtctgttctatatttctttctcaagtcttct
tgcctcccttcctccctcccttcctccttcccttcctccttcccttcctc
cctcccctcccccctccagCGCCGTGGCCGGTCTAGAAGACGCGGAGGGA
GGTGGAGGAGGAAGGGGGGGAGGGGGAGGGGAAGGAGGAGCGAAGAGGAA
GGGACCAATGGTGCTGCCTGGCCCACTGAACATCGATGAGTATCCGGgta
tgaagaagagagagagaggggagggaggaagggagggagggggggatata
gccattacctgcaagcacagagagtctgaaaactttttctcctcatttta
tctcatccctctttttctccccctcttcctccctccctccctccctccct
tagGCGTGGAGCTGCTGTCGGGCAAAGAGAAAGAGCTCTGCGCGGCCTTG
CGACTGCTGCCCAAGCACTACCTGTACATCAAGgtagggaggcagcgagg
gaggggaggagaaaggagcctagaagaaggagaaattgagtgcttccctg
tatgaagtcagatctgtcgctatggctgttcaagaccacctcatcattcc
ttactcattccctccctcccttccttccttccttcctctccctccttctc
tctcctctagAACCGCATCCTCCAAGAAAGTCAAGCCGCCGGCCTCCTCC
TCCCCACCACCACCACCAGCAGCAGCAGCAGCAGCAATGGCAGCAGCGAC
AGAATGGACGGAAAGGAGGGGGAGAAGGGTGGGCAGGGGCGACCTCCGTC
ATCGCTGATAGTGATGGATGTGGAGAAGAAGAAGGGGGTGTATGACTTCA
TGGTCCGGGTAGGGTGGATCACGCCCCGAGgtgcgtgcagggagctgcca
gtaggggtggggggataggcgcagggatggttacgtatgggcgtatttct
gcttctcccccttgtcttccttaactccctctcctcttccatcctccgcg
cttgggtgatggacgggaactgctggaggggtgaagtggaagggctgcct
cgtcctctttctgactttctctgacagtctctcttttagctcctctcgtc
ttcatccttcccgccctcacttcctcccgccctccttatcccccaccctc
tctcttacagCTGCCGCCTCCCGTTCCGACGTGAAGGACATTTCTATCAC
TGTCAGTGGTGGCGAGGGAGGCGCTGTCTCTGAATCTTCCTCCCTCCCTC
CCTCGTCCTCTCCTCCGTCCGCGAAGAAGGGCAGGCCGCCTGGTTCGGGG
AAGGAGGCAGGGGAGGAGGAAGGGGAGGAGAAGGGATCGGGTGGAGACAG
GATTGATGTCGACGAGGCACGACCAGAGAAGGAGAAGGGGGGAGAGGGGG
CAGGAGGAGGAGGTGGGAAGGGAGAAAAGGGCACGTGCCCTCCCTCCACG
GCAAGCCAGAGGAAATCGTCACGGTCCTCCCCCTCCCCCTCTCCTTCATC
TCCAGCGCAGAGTGGCAAGAAGAAGGGGGTGTCAGAAGAAGGCAAGGGCA
AGGTAGAGGCTTCGGCGATGGAGACATGA
back to top

protein sequence of NO07G04540.1

>NO07G04540.1-protein ID=NO07G04540.1-protein|Name=NO07G04540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=469bp
MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDER
DRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQ
FVLGILEAKRLRKRIEQLQQYRRLGIRTQADALAYENEKRKREQEQQMRK
QRADASYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEGGGG
GRGGGGGEGGAKRKGPMVLPGPLNIDEYPGVELLSGKEKELCAALRLLPK
HYLYIKNRILQESQAAGLLLPTTTTSSSSSSNGSSDRMDGKEGEKGGQGR
PPSSLIVMDVEKKKGVYDFMVRVGWITPRAAASRSDVKDISITVSGGEGG
AVSESSSLPPSSSPPSAKKGRPPGSGKEAGEEEGEEKGSGGDRIDVDEAR
PEKEKGGEGAGGGGGKGEKGTCPPSTASQRKSSRSSPSPSPSSPAQSGKK
KGVSEEGKGKVEASAMET*
back to top
Synonyms
Publications