NO07G04540, NO07G04540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_005855429.1 (histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526] >EKU20936.1 histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 270.4 bits (690), Expect = 1.000e-68 Identity = 172/186 (92.47%), Postives = 179/186 (96.24%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMD 187 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEK+LKLMVVDVFNRKLDER++RK FVK +NL DYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQA XXXXXXXXXXXXXXXXXXXXXXXXX LYE+AKP +TKDRSSRYKKRHRG+SDMD Sbjct: 291 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAXXXXXXXXXXXXXXXXXXXXXXXXXXXLYESAKP--STKDRSSRYKKRHRGESDMD 474
BLAST of NO07G04540 vs. NCBI_GenBank
Match: EWM26926.1 (histone acetyltransferase complex component [Nannochloropsis gaditana]) HSP 1 Score: 238.0 bits (606), Expect = 5.800e-59 Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAD 132 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEK+LKLMVVDVFNRKLDER++RK FVK +NL DYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQA+ Sbjct: 266 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKQLKLMVVDVFNRKLDEREKRKAFVKEYNLIDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQAE 396
BLAST of NO07G04540 vs. NCBI_GenBank
Match: CCA23969.1 (transcriptional adapter 2alpha putative [Albugo laibachii Nc14]) HSP 1 Score: 195.3 bits (495), Expect = 4.300e-46 Identity = 124/328 (37.80%), Postives = 180/328 (54.88%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSS--LIVMDVEKKKGVYDFMVRVGWI 327 MPLRGDFDVE+DN+AE+IL++ME D+ P E+ELKL V++++N KLDER RRK+FV L DYK Q E+R+PK+ERE+IA++R FAR+ T +EHE + G++ A RL+K+I LQ+YRR GI+T A+ XXXXX YLY++ + + KDR+SRY++R G D + + D + +D PG LL+ EKELC+ L++LPKHYL IK+ +++E + G P ++ ++ +DVEK + +YDF V GW+ Sbjct: 255 MPLRGDFDVEYDNDAEVILSDMEFAEDDTPTERELKLKVIEIYNSKLDERARRKQFVIEHGLLDYKKHQQTERRRPKEEREIIAQMRPFARFHTREEHEDLIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAEMYEQEKXXXXXELAMQKQRDDASYLYDSTRTNSNGKDRASRYRERLTGLHDDEGS-----DTSSNKRPRTGDSSEDNGRGVSKRIATS--LVDGAPGAHLLAPTEKELCSKLQILPKHYLVIKDVLIRECY------------------------------RLGYLTPDTARQIVKLDVEKSEDIYDFFVSCGWV 545
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_009538924.1 (hypothetical protein PHYSODRAFT_551398 [Phytophthora sojae] >EGZ05393.1 hypothetical protein PHYSODRAFT_551398 [Phytophthora sojae]) HSP 1 Score: 194.5 bits (493), Expect = 7.300e-46 Identity = 118/338 (34.91%), Postives = 177/338 (52.37%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI-----TPRAAAS 334 MPLRGDFDVE+DNEAE+ILA+ME + PAE+ELKL V+ ++N+KL++R RK+FV L DYK Q+ E+++PK+EREL+A++R FAR+Q+P+EH+ FV G++ A RL+K+I LQ+YR+ G+RT A+ YLYE+ + ++ +DR++R++ R +G A + +++ PG LL+ KEKELC+ L+LLPKHYL IK+ +++E + + +DV K VYDF V+ GW+ TP +AS Sbjct: 207 MPLRGDFDVEYDNEAEMILADMEFSEGDHPAERELKLKVIQIYNQKLEKRIERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQSPEEHDNFVEGLIAAMRLKKQILLLQEYRKNGVRTLAEAELYDADKKKRELDQAIQKQRDSASYLYESGRTSSSGRDRANRWQNRDQG-------------ANGDAGGDNSRTRGAASGAAGLNAIAATYSVEGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALVRECFRLGYLTK----------------------------KMAKETVQIDVNKTGQVYDFFVKCGWVKSENATPTVSAS 503
BLAST of NO07G04540 vs. NCBI_GenBank
Match: CCI41344.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 194.5 bits (493), Expect = 7.300e-46 Identity = 120/328 (36.59%), Postives = 173/328 (52.74%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSS--LIVMDVEKKKGVYDFMVRVGWI 327 MPLRGDFDVE+DN+AE+IL++ME D+ P E+ LKL V++++N KLDER RRK+FV L DYK E+R+PK+ERE+IA++R FAR+ T QEHE+ + G++ A RL+K+I LQ+YRR GI+T A+ YLY++ + KDR+SRY++R G D D + D + +D PG LL+ EKELC+ L+LLPKHYL IK+ +++E + G P ++ ++ +DVEK + +YDF V GW+ Sbjct: 258 MPLRGDFDVEYDNDAEVILSDMEFAEDDSPTERALKLKVIEIYNSKLDERVRRKQFVIEHGLLDYKKHLQVERRRPKEEREIIAQMRPFARFHTRQEHEELIQGLITAMRLQKQIVLLQEYRRNGIKTLAEAELYEQEKKKRETELAMQKQRDNASYLYDSTRSTYNGKDRASRYRERFTGLQDED-----VSDTSSNKRSRVDEAGEDAGRGTSKRIATS--LVDGAPGAHLLAPTEKELCSKLQLLPKHYLVIKDVLIRECY------------------------------RMGYLTPDAAQQIVKLDVEKSEDIYDFFVSCGWV 548
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_002998984.1 (transcriptional adapter 2-alpha, putative [Phytophthora infestans T30-4] >EEY69130.1 transcriptional adapter 2-alpha, putative [Phytophthora infestans T30-4]) HSP 1 Score: 193.7 bits (491), Expect = 1.200e-45 Identity = 118/333 (35.44%), Postives = 179/333 (53.75%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWITPRAAAS 334 MPLRGDFDVE+DNEAE+ILA+ME + PAE+ELKL V+ ++N+KL +R RK+FV L DYK Q+ E+++PK+EREL+A++R FAR+QTP++HE+FV G++ A RL+K+I LQ+YR+ G++T A+ YLYE+ + +++DR++R++ R +G S+ AG E + + +++ PG LL+ KEKELC+ L+LLPKHYL IK+ +++E + + +DV K VYDF V+ GW+ A + Sbjct: 208 MPLRGDFDVEYDNEAEIILADMEFSEGDHPAERELKLKVIQIYNQKLAKRMERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEDHEKFVEGLITAMRLKKQILLLQEYRKNGVKTLAEAELYDAEKKKRELDQAIQKQRDSASYLYESGRT-TSSRDRANRWQNREQG----ASSDAGAESSR---------TRGSGAVAGGLNAIAATFSVEGTPGCHLLTPKEKELCSKLKLLPKHYLVIKDALVRECYRLGYL----------------------------SKKMAKETVQIDVNKTGQVYDFFVKCGWVKSENATT 498
BLAST of NO07G04540 vs. NCBI_GenBank
Match: OQS03942.1 (transcriptional adapter 2-alpha [Thraustotheca clavata]) HSP 1 Score: 193.4 bits (490), Expect = 1.600e-45 Identity = 121/338 (35.80%), Postives = 176/338 (52.07%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWITPRAAASRSDVK 339 +PLRGDFDVEHDN+AELILA+ME D+ P E+ELKL V+ ++N KLDER+RRK+FV L DYK Q E+R+PK+ERE+IA++R FAR+ + ++H+ FV G++ A RLRK+I QLQ+YR GIRT A+ YLY++A+ + + R+SR+ R + D + +A +G+ ID PG LL+ KEKELCA L+LLPK YL IK+ +++ES ++++ +D K +YDF V GW+ +S + ++ Sbjct: 160 LPLRGDFDVEHDNDAELILADMEFHDDDHPTERELKLKVISIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEEREIIAQVRPFARFHSKEDHDTFVSGLIAAMRLRKQIAQLQEYRMHGIRTLAEAEMFELDKKKKETEQALQKSRESAAYLYDSARNASGNRVRNSRWLNREQ-DGEKTNA-SGI--------------------------------IDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHLDV----------------------------NTATNMVHIDATKTGQIYDFFVHAGWVKKDGKSSLTKIR 435
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_008607118.1 (hypothetical protein SDRG_03265 [Saprolegnia diclina VS20] >EQC39057.1 hypothetical protein SDRG_03265 [Saprolegnia diclina VS20]) HSP 1 Score: 192.2 bits (487), Expect = 3.600e-45 Identity = 122/326 (37.42%), Postives = 170/326 (52.15%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI 327 MPLRGDFDVEH+N+AELILA+ME D+ P E+ELKL V+ ++N KLDER+RRK+FV L DYK Q E+R+PK+ERELIA++R FAR+ + ++HE FV G+L A RLRK+I LQ+YR+ GIRT A+ YLY++++ + R+SR+ R + D +SA +G+ ID PG LL+ KEKELCA L+LLPK YL IK+ +++ES +++I +D K +Y+F V GW+ Sbjct: 157 MPLRGDFDVEHENDAELILADMEFHDDDHPTERELKLKVIAIYNAKLDERERRKKFVIAHGLLDYKKYQQVERRRPKEERELIAQVRPFARFHSKEDHETFVSGLLAAMRLRKQIALLQEYRKRGIRTLAEAEMYELDKKKRETEQALQKSRESAAYLYDSSRGPTANRQRNSRWLSR---EQDGESA-SGI--------------------------------IDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHL----------------------------DASTAANMIQIDATKTGQIYEFFVHAGWV 418
BLAST of NO07G04540 vs. NCBI_GenBank
Match: POM80833.1 (Transcriptional adapter 2-alpha, partial [Phytophthora palmivora var. palmivora]) HSP 1 Score: 192.2 bits (487), Expect = 3.600e-45 Identity = 123/338 (36.39%), Postives = 179/338 (52.96%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI-----TPRAAAS 334 MPLRGDFDVE DNEAE+ILA+ME + PAE+ELKL V+ ++N KL +R RK+FV L DYK Q+ E+++PK+EREL+A++R FAR+QTP+EH+ FV G++ A RL+K+I LQ+YR+ G++T A+ YLYE+ + ++++DR++R++ R G S+ AG E++ + +I+ PG LL+ KEKELC L+LLPKHYL IK+ +++E + + +DV K VYDF V+ GW+ TP AAS Sbjct: 482 MPLRGDFDVECDNEAEVILADMEFSDGDHPAERELKLKVIQIYNEKLAKRIERKKFVVERGLLDYKLHQHTERKRPKEERELLAQVRPFARFQTPEEHDNFVEGLIAAMRLKKQILLLQEYRKNGVKTLAEAELYDAEKKKRELDQAIQKQRDNASYLYESGRT-SSSRDRANRWQNREHG----ASSDAGGENSR------------TRGSAGGLNTIAATFSIEGTPGCHLLTPKEKELCCKLKLLPKHYLVIKDALVRECYRLGYLTK----------------------------KMAKETVQIDVNKTGQVYDFFVKCGWVKSESATPTVAAS 774
BLAST of NO07G04540 vs. NCBI_GenBank
Match: XP_012202422.1 (hypothetical protein SPRG_08061 [Saprolegnia parasitica CBS 223.65] >KDO26759.1 hypothetical protein SPRG_08061 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 191.4 bits (485), Expect = 6.200e-45 Identity = 122/326 (37.42%), Postives = 170/326 (52.15%), Query Frame = 0 Query: 1 MPLRGDFDVEHDNEAELILAEMEILPDEDPAEKELKLMVVDVFNRKLDERDRRKEFVKTFNLTDYKALQNKEKRKPKDERELIAKLRVFARYQTPQEHEQFVLGILEAKRLRKRIEQLQQYRRLGIRTQADXXXXXXXXXXXXXXXXXXXXXXXXXYLYETAKPGNTTKDRSSRYKKRHRGDSDMDSAVAGLEDAEXXXXXXXXXXXXXXXXXXXXXVLPGPLNIDEYPGVELLSGKEKELCAALRLLPKHYLYIKNRILQESQXXXXXXXXXXXXXXXXXXXXXXXXDGKEGEKGGQGRPPSSLIVMDVEKKKGVYDFMVRVGWI 327 MPLRGDFDVEH+N+AELILA+ME D+ P E+ELKL V+ ++N KLDER+RRK+FV L DYK Q E+R+PK+ERELIA++R FAR+ + ++H+ FV G+L A RLRK+I LQ+YR+ GIRT A+ YLY++++ + RSSR+ R + D +SA +G+ ID PG LL+ KEKELCA L+LLPK YL IK+ +++ES +++I +D K +Y+F V GW+ Sbjct: 158 MPLRGDFDVEHENDAELILADMEFHDDDHPTERELKLKVIAIYNAKLDERERRKKFVIEHGLLDYKKYQQVERRRPKEERELIAQVRPFARFHSKEDHDTFVSGLLAAMRLRKQIALLQEYRKRGIRTLAEAEMYELDKKKRETEQALQKSRESAAYLYDSSRGPTANRQRSSRWLSR---EQDGESA-SGI--------------------------------IDGAPGAHLLTPKEKELCARLQLLPKQYLVIKDVLVRESYRLGHL----------------------------DAGTAANMIQIDATKTGQIYEFFVHAGWV 419 The following BLAST results are available for this feature:
BLAST of NO07G04540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04540 ID=NO07G04540|Name=NO07G04540|organism=Nannochloropsis oceanica|type=gene|length=3279bpback to top protein sequence of NO07G04540.1 >NO07G04540.1-protein ID=NO07G04540.1-protein|Name=NO07G04540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=469bpback to top Synonyms
Publications
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