NO07G04500, NO07G04500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04500 vs. NCBI_GenBank
Match: EWM26931.1 (signal recognition particle receptor subunit beta [Nannochloropsis gaditana]) HSP 1 Score: 348.2 bits (892), Expect = 2.800e-92 Identity = 183/335 (54.63%), Postives = 230/335 (68.66%), Query Frame = 0 Query: 1 MADPVTAAIEEIMEENVLPLPPST-------SYLPPAL---LSLLAQAEAQLASHLPSHAQEKLKEVDAWGLEALGLPHAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKSRGKPTHIVLVGPCGAGKTSLYHQLLFGAVPETVTSMEESEGVDKERGFTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFSAAAVRGAAEFLYNLLTHSAMEGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSVVXXXXXXLLGENEVFEEDRGVGPLISFIVDK 326 M+DPVT+A+EE++EENV P PP+T S L P + L +LA+ E ++ HLP AQ+K VDAWG ALGLPH+G ++ R +P+H+VL+GPCGAGKT+LYHQLL+ VPETVTSM ESEG+ K++ LVDFPGHERLR W K++L GKVAGV+FVVDAADFS VR AAEFLY++LTH+AM+ GPP+L+ACHKSDLP AK P+R++ LLT EL+RLRKT+GG M +G GEE EDRLPLGR PLNLD+DAPSEL+FA+T+V G N+ EED +GPL++FI DK Sbjct: 1 MSDPVTSAVEELLEENVFP-PPATASPSSTSSMLTPLITTFLGVLARVEEKVVEHLPPQAQKKFHAVDAWGSTALGLPHSGIIITCLLLLLVLGLSLYFVGIGRARGHKPLPGGKQGRARPSHVVLLGPCGAGKTALYHQLLYNTVPETVTSMVESEGILKDKDIRLVDFPGHERLRGGWKKQFLDAGKVAGVIFVVDAADFSTHKVREAAEFLYDILTHAAMDDGPPLLVACHKSDLPGAKAPARIKALLTSELERLRKTQGGAMMDGNGEEEEDRLPLGRVAVPLNLDVDAPSELTFASTNVAQQTQ---FGGNDAIEED--IGPLMTFISDK 329
BLAST of NO07G04500 vs. NCBI_GenBank
Match: OQR97523.1 (hypothetical protein ACHHYP_10754 [Achlya hypogyna]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 0 Query: 114 IVLVGPCGAGKTSLYHQLLFGAVP-ETVTSMEESEG----VDKERG-FTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFS-AAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSVV 296 ++LVGPCGAGKT+L+H+L G TVTSM+E+ D+E F + DFPGHER+R + + Y K ++FVVD+ + A +R AAEFLY++ TH + + G PV+IAC KSD A + VR+LL EL +L+ TR + GE +E +PLGR P DIDAP E++F S+V Sbjct: 45 VLLVGPCGAGKTALFHRLRDGPTKVTTVTSMKETMEKFPLFDEENATFNICDFPGHERMRSQAGQFYPIAKK---IIFVVDSTTANDAGHIRKAAEFLYDIFTHPKVNDAGVPVMIACSKSDETKAATSATVRSLLESELTQLKSTRASLEAHGEDDES---IPLGRDNAPFAFDIDAPCEVTFENYSIV 228
BLAST of NO07G04500 vs. NCBI_GenBank
Match: GAY00137.1 (Sar1p-like ras-family protein, partial [Pythium insidiosum]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 85/191 (44.50%), Postives = 113/191 (59.16%), Query Frame = 0 Query: 115 VLVGPCGAGKTSLYHQLLFGAVPETVTSMEESEG----------VDKERGFTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFSAAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSV 295 +L+G GAGKT+L+HQL G ETVTSM+E EG ++ T++DFPGHER R Y TG VVF+VDAAD + R AAEFLY++ +++ + P +LIAC+KSDL SA V+ L +EL +L+KTR + E EGEE +P+GR G D+DAP E+SF SV Sbjct: 60 LLLGARGAGKTALFHQLRDGRFVETVTSMKELEGKFAVHPSYNTINFGAHLTVIDFPGHERQRSRVADFYPVTG---CVVFLVDAAD---PSFRKAAEFLYDIFSNAKFNDVAPKMLIACNKSDLSSAASVDAVKEALEKELTKLKKTRSSL--ETEGEEDTSTVPVGRDGAAFQFDVDAPCEVSFTRCSV 242
BLAST of NO07G04500 vs. NCBI_GenBank
Match: GAY00131.1 (26S proteasome non-ATPase regulatory subunit 12, putative [Pythium insidiosum]) HSP 1 Score: 133.3 bits (334), Expect = 1.400e-27 Identity = 85/191 (44.50%), Postives = 113/191 (59.16%), Query Frame = 0 Query: 115 VLVGPCGAGKTSLYHQLLFGAVPETVTSMEESEG----------VDKERGFTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFSAAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSV 295 +L+G GAGKT+L+HQL G ETVTSM+E EG ++ T++DFPGHER R Y TG VVF+VDAAD + R AAEFLY++ +++ + P +LIAC+KSDL SA V+ L +EL +L+KTR + E EGEE +P+GR G D+DAP E+SF SV Sbjct: 723 LLLGARGAGKTALFHQLRDGRFVETVTSMKELEGKFAVHPSYNTINFGAHLTVIDFPGHERQRSRVADFYPVTG---CVVFLVDAAD---PSFRKAAEFLYDIFSNAKFNDVAPKMLIACNKSDLSSAASVDAVKEALEKELTKLKKTRSSL--ETEGEEDTSTVPVGRDGAAFQFDVDAPCEVSFTRCSV 905
BLAST of NO07G04500 vs. NCBI_GenBank
Match: XP_009837361.1 (hypothetical protein H257_11974 [Aphanomyces astaci] >ETV73156.1 hypothetical protein H257_11974 [Aphanomyces astaci]) HSP 1 Score: 131.7 bits (330), Expect = 4.100e-27 Identity = 79/194 (40.72%), Postives = 116/194 (59.79%), Query Frame = 0 Query: 109 GKPTHIVLVGPCGAGKTSLYHQLLFGAVP-ETVTSMEESEGV-----DKERGFTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADF-SAAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSV 295 GK I+L+GPCG GKT+L+H+L G +TVTSM+E+ + +++DFPGHERLR + + Y K +VFVVDA AA VR AAEFLY++ H + + G P+L+AC K+D+ SA P+ ++T+L EL +L+ TR + E + ++ +PLGR P D+DAP E+ F S+ Sbjct: 40 GKRDVILLLGPCGGGKTALFHRLRDGPTKVDTVTSMKETLETFPLFDEDAATVSVLDFPGHERLRSQVSQFYPIAKK---LVFVVDATTIGDAAQVRKAAEFLYDIFVHPKLHDNGIPLLVACSKADMSSAATPANIQTILEAELSQLKSTRASL----ETHDDDESIPLGRENVPFAFDVDAPCEVVFEGYSI 226
BLAST of NO07G04500 vs. NCBI_GenBank
Match: XP_008876353.1 (hypothetical protein H310_11442 [Aphanomyces invadans] >ETV95180.1 hypothetical protein H310_11442 [Aphanomyces invadans]) HSP 1 Score: 131.7 bits (330), Expect = 4.100e-27 Identity = 81/194 (41.75%), Postives = 120/194 (61.86%), Query Frame = 0 Query: 109 GKPTHIVLVGPCGAGKTSLYHQLLFG-AVPETVTSMEESEGV----DKERG-FTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADF-SAAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSV 295 GK I+L+GPCG GKT+L+H+L G + +TVTSM+E+ D+E +++DFPGHERLR + + Y K +VFVVDA AA VR AAEFLY++ H + + G P+L+AC K+D+ +A PS +++LL EL +L+ TR + E + ++ +PLGR P D+DAP E+ F + S+ Sbjct: 40 GKRDVILLLGPCGGGKTALFHRLRDGPSKVDTVTSMKETLETFPLFDEEAATVSVLDFPGHERLRSQVSQFYPIAKK---LVFVVDATTVGDAAQVRKAAEFLYDIFVHPKVHDNGIPLLVACSKADVATAATPSHIQSLLETELSQLKSTRASL----EAHDDDESIPLGRENVPFAFDVDAPCEVVFESYSI 226
BLAST of NO07G04500 vs. NCBI_GenBank
Match: XP_008620385.1 (hypothetical protein SDRG_15975 [Saprolegnia diclina VS20] >EQC26170.1 hypothetical protein SDRG_15975 [Saprolegnia diclina VS20]) HSP 1 Score: 125.6 bits (314), Expect = 2.900e-25 Identity = 76/189 (40.21%), Postives = 114/189 (60.32%), Query Frame = 0 Query: 114 IVLVGPCGAGKTSLYHQLLFGAVP-ETVTSMEESEGV----DKERG-FTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFS-AAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSV 295 ++LVGPCGAGKT+L+H+L G +TVTSM+E+ D+E ++ DFPGHER+R + Y K ++F+VDA + A+ +R AAEFLY++ TH + + G PV+IAC K+D A P+ V+ LL EL +++ TR + G+ +E +PLGR P IDAP +++F S+ Sbjct: 45 VLLVGPCGAGKTALFHRLRDGPTKVQTVTSMKETMETFPLFDEENATISICDFPGHERMRSTATQFYPIAKK---IIFIVDATTANDASHIRKAAEFLYDIFTHPKINDAGVPVMIACSKTDDVKAATPATVQLLLEAELTQIKSTRASLEAHGDDDES---IPLGRDNAPFEFAIDAPCDVTFEGYSI 227
BLAST of NO07G04500 vs. NCBI_GenBank
Match: XP_012194376.1 (hypothetical protein SPRG_00769 [Saprolegnia parasitica CBS 223.65] >KDO34706.1 hypothetical protein SPRG_00769 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 124.8 bits (312), Expect = 5.000e-25 Identity = 78/189 (41.27%), Postives = 114/189 (60.32%), Query Frame = 0 Query: 114 IVLVGPCGAGKTSLYHQLLFGAVP-ETVTSMEESEGV----DKERG-FTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFS-AAAVRGAAEFLYNLLTHSAM-EGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATSV 295 ++LVGPCGAGKT+L+H+L G ETVTSM+E+ D+E ++ DFPGHER+R + Y K ++FVVDA + A+ +R AAEFLY++ TH + + G PV+IAC K+D A P+ V++LL EL +L+ TR + G+ +E +PLGR IDAP +++F S+ Sbjct: 45 VLLVGPCGAGKTALFHRLRNGPTKVETVTSMKETMETFPLFDEENATISICDFPGHERMRSTATQFYPIAKK---IIFVVDATTANDASHIRKAAEFLYDIFTHPKINDAGVPVMIACSKTDDVKAATPATVQSLLETELTQLKSTRASLEAHGDDDES---IPLGRDNALFEFAIDAPCDVTFEGYSI 227
BLAST of NO07G04500 vs. NCBI_GenBank
Match: XP_024573769.1 (Signal recognition particle receptor, beta subunit (small G protein superfamily) [Plasmopara halstedii] >CEG37400.1 Signal recognition particle receptor, beta subunit (small G protein superfamily) [Plasmopara halstedii]) HSP 1 Score: 119.0 bits (297), Expect = 2.700e-23 Identity = 76/197 (38.58%), Postives = 113/197 (57.36%), Query Frame = 0 Query: 110 KPTHIVLVGPCGAGKTSLYHQLLFGAVPETVTSMEE---------SEGVDK-ERGFTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFSAAAVRGAAEFLYNLLTH-SAMEGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGE-DRLPLGRTGQPLNLDIDAPSELSFAATSV 295 K I+L+GP AGKTS +H + G +TV+SM+E +DK + T+VD+PGHERLR Y T + +VF VDA+D A+ R AAEFLY++ + + + PP+++ C+KS+ A G VR L +EL +L+ TR + EG+ +E + ++P+GR G P D+DAP E+ F SV Sbjct: 49 KKKTILLLGPRHAGKTSFFHLIHDGIHVDTVSSMKERTDRFIVHSKYNLDKLDTELTVVDYPGHERLRSRVADFYPVT---SCIVFFVDASD--VASFRKAAEFLYDIFANKNVNDQSPPLMVVCNKSEAVGAVGSQVVRDALEKELTKLKATRSSLETEGDDDEQDLTQVPVGRDGAPFQFDVDAPCEILFVKCSV 240
BLAST of NO07G04500 vs. NCBI_GenBank
Match: XP_015217075.1 (PREDICTED: signal recognition particle receptor subunit beta isoform X2 [Lepisosteus oculatus]) HSP 1 Score: 117.5 bits (293), Expect = 8.000e-23 Identity = 69/186 (37.10%), Postives = 107/186 (57.53%), Query Frame = 0 Query: 114 IVLVGPCGAGKTSLYHQLLFGAVPETVTSMEESEGV-----DKERGFTLVDFPGHERLRDEWFKRYLYTGKVAGVVFVVDAADFSAAAVRGAAEFLYNLLTHS-AMEGGPPVLIACHKSDLPSAKGPSRVRTLLTQELDRLRKTRGGVMDEGEGEEGEDRLPLGRTGQPLNLDIDAPSELSFAATS 294 I+L G C +GKT L+ +LL G +T TS+ +S + D+ G TL+D PGHE LR ++ +++ + +V +VFVVD+A F VR AEFLY+LLT S ++ P +++AC+K D+ AK ++ L +EL+ LR TR + +G G +PLGR G+ + P ++ F S Sbjct: 14 ILLTGLCDSGKTLLFSRLLTGKFKKTQTSITDSTAIYRTKSDRGAGMTLIDLPGHESLRPQYIEKFKSSARV--IVFVVDSAIFQ-KEVRDVAEFLYSLLTDSVVVKNAPALVVACNKQDVTMAKSAKLIQQQLEKELNTLRVTRSAALSSQDGSAGGGTVPLGRKGKEFDFS-QLPMKVEFVECS 195 The following BLAST results are available for this feature:
BLAST of NO07G04500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04500 ID=NO07G04500|Name=NO07G04500|organism=Nannochloropsis oceanica|type=gene|length=2092bpback to top protein sequence of NO07G04500.1 >NO07G04500.1-protein ID=NO07G04500.1-protein|Name=NO07G04500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=329bpback to top Synonyms
Publications
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